RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 LINC00322Q6ZN03 302 aaPredicted RBP10.34□□□□□ -0.75
PMS1-201ENST00000342075 AGPAT4-IT1Q9H0P7 198 aa10.34□□□□□ -0.75
PMS1-201ENST00000342075 TMEM241Q24JQ0 296 aa10.34□□□□□ -0.75
PMS1-201ENST00000342075 PSG8Q9UQ74 426 aa10.34□□□□□ -0.75
PMS1-201ENST00000342075 FLI1Q01543 452 aaPredicted RBP10.33□□□□□ -0.75
PMS1-201ENST00000342075 ODF3L2Q3SX64 289 aa10.33□□□□□ -0.75
PMS1-201ENST00000342075 SHISA2Q6UWI4 295 aa10.33□□□□□ -0.75
PMS1-201ENST00000342075 BAGE2Q86Y30 109 aa10.33□□□□□ -0.75
PMS1-201ENST00000342075 SIGLEC8Q9NYZ4 499 aa10.33□□□□□ -0.75
PMS1-201ENST00000342075 KLF12Q9Y4X4 402 aa10.33□□□□□ -0.75
PMS1-201ENST00000342075 CLRN3Q8NCR9 226 aa10.33□□□□□ -0.76
PMS1-201ENST00000342075 NAT8Q9UHE5 227 aa10.33□□□□□ -0.76
PMS1-201ENST00000342075 PAFAH1B2P68402 229 aa10.33□□□□□ -0.76
PMS1-201ENST00000342075 OXLD1Q5BKU9 147 aa10.33□□□□□ -0.76
PMS1-201ENST00000342075 RNASE7Q9H1E1 156 aaKnown RBP10.33□□□□□ -0.76
PMS1-201ENST00000342075 MAP6D1Q9H9H5 199 aa10.33□□□□□ -0.76
PMS1-201ENST00000342075 LTAP01374 205 aa10.32□□□□□ -0.76
PMS1-201ENST00000342075 TMEM75Q8N9X5 138 aa10.32□□□□□ -0.76
PMS1-201ENST00000342075 SNRPD3P62318 126 aaKnown RBP10.32□□□□□ -0.76
PMS1-201ENST00000342075 ACTL10Q5JWF8 245 aa10.32□□□□□ -0.76
PMS1-201ENST00000342075 TMEM88Q6PEY1 159 aa10.32□□□□□ -0.76
PMS1-201ENST00000342075 OR8A1Q8NGG7 326 aa10.32□□□□□ -0.76
PMS1-201ENST00000342075 ZC2HC1AQ96GY0 325 aa10.32□□□□□ -0.76
PMS1-201ENST00000342075 FMC1Q96HJ9 113 aa10.32□□□□□ -0.76
PMS1-201ENST00000342075 ID1P41134 155 aa10.31□□□□□ -0.76
PMS1-201ENST00000342075 PRR9Q5T870 116 aa10.31□□□□□ -0.76
PMS1-201ENST00000342075 SVBPQ8N300 66 aa10.31□□□□□ -0.76
PMS1-201ENST00000342075 CT45A10P0DMU9 189 aa10.31□□□□□ -0.76
PMS1-201ENST00000342075 ZNF80P51504 273 aaPredicted RBP10.31□□□□□ -0.76
PMS1-201ENST00000342075 FXYD7P58549 80 aa10.31□□□□□ -0.76
PMS1-201ENST00000342075 OR4B1Q8NGF8 309 aa10.31□□□□□ -0.76
PMS1-201ENST00000342075 SPAG8Q99932 426 aaPredicted RBP10.31□□□□□ -0.76
PMS1-201ENST00000342075 C7orf77A4D0Y5 90 aa10.31□□□□□ -0.76
PMS1-201ENST00000342075 RPS10P5Q9NQ39 176 aa10.31□□□□□ -0.76
PMS1-201ENST00000342075 C9JCJ5 164 aa10.3□□□□□ -0.76
PMS1-201ENST00000342075 CA1P00915 261 aaPredicted RBP10.3□□□□□ -0.76
PMS1-201ENST00000342075 CBLN2Q8IUK8 224 aa10.3□□□□□ -0.76
PMS1-201ENST00000342075 TCEAL7Q9BRU2 100 aa10.3□□□□□ -0.76
PMS1-201ENST00000342075 MLST8Q9BVC4 326 aa10.3□□□□□ -0.76
PMS1-201ENST00000342075 CRIP1P50238 77 aa10.3□□□□□ -0.76
PMS1-201ENST00000342075 RNF212Q495C1 297 aa10.3□□□□□ -0.76
PMS1-201ENST00000342075 ISOC2Q96AB3 205 aa10.3□□□□□ -0.76
PMS1-201ENST00000342075 PRR25Q96S07 402 aa10.3□□□□□ -0.76
PMS1-201ENST00000342075 PRELID1Q9Y255 219 aa10.3□□□□□ -0.76
PMS1-201ENST00000342075 K7EQM0 130 aa10.29□□□□□ -0.76
PMS1-201ENST00000342075 TAS2R60P59551 318 aa10.29□□□□□ -0.76
PMS1-201ENST00000342075 FAM74A3Q4VXF1 159 aa10.29□□□□□ -0.76
PMS1-201ENST00000342075 A0A0J9YX75 114 aa10.29□□□□□ -0.76
PMS1-201ENST00000342075 OR4C46A6NHA9 309 aa10.29□□□□□ -0.76
PMS1-201ENST00000342075 M0R2Z0 102 aa10.29□□□□□ -0.76
PMS1-201ENST00000342075 TMEM78Q5T7P6 136 aa10.29□□□□□ -0.76
PMS1-201ENST00000342075 OR10J6PQ8NGY7 276 aa10.29□□□□□ -0.76
PMS1-201ENST00000342075 MRPL53Q96EL3 112 aaKnown RBP10.29□□□□□ -0.76
PMS1-201ENST00000342075 RBMY1BA6NDE4 496 aaKnown RBP10.28□□□□□ -0.76
PMS1-201ENST00000342075 RBMY1EA6NEQ0 496 aaKnown RBP10.28□□□□□ -0.76
PMS1-201ENST00000342075 RBMY1DP0C7P1 496 aaKnown RBP10.28□□□□□ -0.76
PMS1-201ENST00000342075 WFDC9Q8NEX5 89 aa10.28□□□□□ -0.76
PMS1-201ENST00000342075 DNAH3Q8TD57 4116 aa10.28□□□□□ -0.76
PMS1-201ENST00000342075 TRAV12-2A0A075B6T6 113 aa10.28□□□□□ -0.76
PMS1-201ENST00000342075 RPL19P84098 196 aaKnown RBP10.28□□□□□ -0.76
PMS1-201ENST00000342075 C9orf47Q6ZRZ4 202 aa10.28□□□□□ -0.76
PMS1-201ENST00000342075 ZNF492Q9P255 531 aa10.28□□□□□ -0.76
PMS1-201ENST00000342075 NPIPB6E9PJ23 425 aa10.28□□□□□ -0.76
PMS1-201ENST00000342075 NDUFS6O75380 124 aaKnown RBP10.28□□□□□ -0.76
PMS1-201ENST00000342075 SNAPINO95295 136 aa10.28□□□□□ -0.76
PMS1-201ENST00000342075 C9orf66Q5T8R8 295 aa10.28□□□□□ -0.76
PMS1-201ENST00000342075 SAV1Q9H4B6 383 aaPredicted RBP10.28□□□□□ -0.76
PMS1-201ENST00000342075 ZNF138P52744 262 aa10.27□□□□□ -0.77
PMS1-201ENST00000342075 TMEM183AQ8IXX5 376 aa10.27□□□□□ -0.77
PMS1-201ENST00000342075 C19orf73Q9NVV2 129 aa10.27□□□□□ -0.77
PMS1-201ENST00000342075 TRAV25A0A0B4J276 109 aa10.27□□□□□ -0.77
PMS1-201ENST00000342075 SFRP2Q96HF1 295 aa10.27□□□□□ -0.77
PMS1-201ENST00000342075 CLEC5AQ9NY25 188 aa10.27□□□□□ -0.77
PMS1-201ENST00000342075 URGCP-MRPS24S4R325 110 aa10.27□□□□□ -0.77
PMS1-201ENST00000342075 RBAKDNA6NC62 111 aa10.26□□□□□ -0.77
PMS1-201ENST00000342075 GCGP01275 180 aa10.26□□□□□ -0.77
PMS1-201ENST00000342075 ERVFC1-1P60608 527 aa10.26□□□□□ -0.77
PMS1-201ENST00000342075 BTN1A1Q13410 526 aa10.26□□□□□ -0.77
PMS1-201ENST00000342075 SPINK13Q1W4C9 94 aa10.26□□□□□ -0.77
PMS1-201ENST00000342075 BEAN1Q3B7T3 259 aa10.26□□□□□ -0.77
PMS1-201ENST00000342075 DEFB125Q8N687 156 aa10.26□□□□□ -0.77
PMS1-201ENST00000342075 G3V4G9 280 aa10.25□□□□□ -0.77
PMS1-201ENST00000342075 EBLN2Q6P2I7 272 aa10.25□□□□□ -0.77
PMS1-201ENST00000342075 ZFAND2AQ8N6M9 145 aa10.25□□□□□ -0.77
PMS1-201ENST00000342075 TMSB15BA0A087X1C1 80 aa10.25□□□□□ -0.77
PMS1-201ENST00000342075 OR11H12B2RN74 326 aa10.25□□□□□ -0.77
PMS1-201ENST00000342075 GZMBP10144 247 aa10.25□□□□□ -0.77
PMS1-201ENST00000342075 PNRC1Q12796 327 aaPredicted RBP10.25□□□□□ -0.77
PMS1-201ENST00000342075 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.25□□□□□ -0.77
PMS1-201ENST00000342075 NUDT10Q8NFP7 164 aa10.25□□□□□ -0.77
PMS1-201ENST00000342075 NUDT11Q96G61 164 aa10.25□□□□□ -0.77
PMS1-201ENST00000342075 SERTM2A0A1B0GWG4 89 aa10.25□□□□□ -0.77
PMS1-201ENST00000342075 H3BMM0 161 aa10.25□□□□□ -0.77
PMS1-201ENST00000342075 KRTAP10-11P60412 298 aa10.25□□□□□ -0.77
PMS1-201ENST00000342075 FOXI2Q6ZQN5 318 aa10.25□□□□□ -0.77
PMS1-201ENST00000342075 C11orf21Q9P2W6 132 aa10.25□□□□□ -0.77
PMS1-201ENST00000342075 TRAV2A0A0B4J234 112 aa10.24□□□□□ -0.77
PMS1-201ENST00000342075 PRM2P04554 102 aa10.24□□□□□ -0.77
PMS1-201ENST00000342075 IBA57Q5T440 356 aaKnown RBP10.24□□□□□ -0.77
PMS1-201ENST00000342075 AMTNQ6UX39 209 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms