RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 LINC00311Q8N616 119 aa11.9□□□□□ -0.5
BRAT1-201ENST00000340611 SYT8Q8NBV8 401 aa11.9□□□□□ -0.5
BRAT1-201ENST00000340611 OR11H1Q8NG94 326 aa11.9□□□□□ -0.5
BRAT1-201ENST00000340611 OR11H2Q8NH07 326 aa11.9□□□□□ -0.5
BRAT1-201ENST00000340611 RPEQ96AT9 228 aa11.9□□□□□ -0.5
BRAT1-201ENST00000340611 INSIG2Q9Y5U4 225 aa11.9□□□□□ -0.5
BRAT1-201ENST00000340611 APELAP0DMC3 54 aa11.9□□□□□ -0.51
BRAT1-201ENST00000340611 PYYP10082 97 aa11.9□□□□□ -0.51
BRAT1-201ENST00000340611 PRTN3P24158 256 aa11.9□□□□□ -0.51
BRAT1-201ENST00000340611 TMEM30BQ3MIR4 351 aa11.9□□□□□ -0.51
BRAT1-201ENST00000340611 ADTRPQ96IZ2 230 aa11.9□□□□□ -0.51
BRAT1-201ENST00000340611 SIRPDQ9H106 197 aa11.9□□□□□ -0.51
BRAT1-201ENST00000340611 TMEM14BQ9NUH8 114 aa11.9□□□□□ -0.51
BRAT1-201ENST00000340611 IGHV1-3A0A0C4DH29 117 aa11.89□□□□□ -0.51
BRAT1-201ENST00000340611 SAA1P0DJI8 122 aaPredicted RBP11.89□□□□□ -0.51
BRAT1-201ENST00000340611 RNF223E7ERA6 249 aa11.89□□□□□ -0.51
BRAT1-201ENST00000340611 C10orf55Q5SWW7 151 aa11.89□□□□□ -0.51
BRAT1-201ENST00000340611 RUSC1-AS1Q66K80 236 aa11.89□□□□□ -0.51
BRAT1-201ENST00000340611 FOXI2Q6ZQN5 318 aa11.89□□□□□ -0.51
BRAT1-201ENST00000340611 OR5AN1Q8NGI8 311 aa11.89□□□□□ -0.51
BRAT1-201ENST00000340611 CITED1Q99966 193 aa11.89□□□□□ -0.51
BRAT1-201ENST00000340611 FOXA2Q9Y261 457 aaPredicted RBP11.89□□□□□ -0.51
BRAT1-201ENST00000340611 TIMM23O14925 209 aa11.88□□□□□ -0.51
BRAT1-201ENST00000340611 IGHV3-48P01763 117 aa11.88□□□□□ -0.51
BRAT1-201ENST00000340611 OR5AL1P0C617 328 aa11.88□□□□□ -0.51
BRAT1-201ENST00000340611 FXYD2P54710 66 aa11.88□□□□□ -0.51
BRAT1-201ENST00000340611 FXYD7P58549 80 aa11.88□□□□□ -0.51
BRAT1-201ENST00000340611 MYO9AB2RTY4 2548 aa11.88□□□□□ -0.51
BRAT1-201ENST00000340611 E7EUB6 86 aa11.88□□□□□ -0.51
BRAT1-201ENST00000340611 C8orf88P0DMB2 117 aa11.88□□□□□ -0.51
BRAT1-201ENST00000340611 TAS2R45P59539 299 aa11.88□□□□□ -0.51
BRAT1-201ENST00000340611 GAGE5Q13069 117 aa11.88□□□□□ -0.51
BRAT1-201ENST00000340611 GAGE6Q13070 117 aa11.88□□□□□ -0.51
BRAT1-201ENST00000340611 BRD3OSQ6XYD6 125 aa11.88□□□□□ -0.51
BRAT1-201ENST00000340611 FLYWCH2Q96CP2 140 aaKnown RBP11.88□□□□□ -0.51
BRAT1-201ENST00000340611 ERG28Q9UKR5 140 aa11.88□□□□□ -0.51
BRAT1-201ENST00000340611 M0R1W7 72 aa11.87□□□□□ -0.51
BRAT1-201ENST00000340611 SLC25A33Q9BSK2 321 aa11.87□□□□□ -0.51
BRAT1-201ENST00000340611 NDFIP1Q9BT67 221 aa11.87□□□□□ -0.51
BRAT1-201ENST00000340611 TTTY13Q9BZ97 58 aa11.87□□□□□ -0.51
BRAT1-201ENST00000340611 NHP2Q9NX24 153 aaKnown RBP11.87□□□□□ -0.51
BRAT1-201ENST00000340611 AMMECR1Q9Y4X0 333 aaPredicted RBP11.87□□□□□ -0.51
BRAT1-201ENST00000340611 CR1P17927 2039 aa11.87□□□□□ -0.51
BRAT1-201ENST00000340611 CRYGCP07315 174 aa11.87□□□□□ -0.51
BRAT1-201ENST00000340611 GNG5P63218 68 aa11.87□□□□□ -0.51
BRAT1-201ENST00000340611 FLNBO75369 2602 aaKnown RBP11.87□□□□□ -0.51
BRAT1-201ENST00000340611 A0A1B0GWB2 263 aa11.87□□□□□ -0.51
BRAT1-201ENST00000340611 A0A1W2PPI3 338 aa11.87□□□□□ -0.51
BRAT1-201ENST00000340611 RPL32P62910 135 aaKnown RBP11.87□□□□□ -0.51
BRAT1-201ENST00000340611 SSBP2P81877 361 aaPredicted RBP11.87□□□□□ -0.51
BRAT1-201ENST00000340611 BCL6BQ8N143 479 aaPredicted RBP11.87□□□□□ -0.51
BRAT1-201ENST00000340611 GLMPQ8WWB7 406 aa11.87□□□□□ -0.51
BRAT1-201ENST00000340611 MBD6Q96DN6 1003 aa11.87□□□□□ -0.51
BRAT1-201ENST00000340611 LY6LH3BQJ8 138 aa11.86□□□□□ -0.51
BRAT1-201ENST00000340611 LINC01545Q5VT33 79 aa11.86□□□□□ -0.51
BRAT1-201ENST00000340611 OSR1Q8TAX0 266 aaPredicted RBP11.86□□□□□ -0.51
BRAT1-201ENST00000340611 SLC25A2Q9BXI2 301 aa11.86□□□□□ -0.51
BRAT1-201ENST00000340611 A8MWL6 223 aa11.86□□□□□ -0.51
BRAT1-201ENST00000340611 SMAD7O15105 426 aaKnown RBP11.86□□□□□ -0.51
BRAT1-201ENST00000340611 SCGB2A1O75556 95 aa11.86□□□□□ -0.51
BRAT1-201ENST00000340611 RBP4P02753 201 aa11.86□□□□□ -0.51
BRAT1-201ENST00000340611 DEFB113Q30KQ7 82 aa11.86□□□□□ -0.51
BRAT1-201ENST00000340611 PIP4P2Q8N4L2 257 aa11.86□□□□□ -0.51
BRAT1-201ENST00000340611 C8orf31Q8N9H6 132 aa11.86□□□□□ -0.51
BRAT1-201ENST00000340611 OR11H6Q8NGC7 330 aa11.86□□□□□ -0.51
BRAT1-201ENST00000340611 FAM167A-AS1Q96KT0 104 aa11.86□□□□□ -0.51
BRAT1-201ENST00000340611 PGLYRP4Q96LB8 373 aa11.86□□□□□ -0.51
BRAT1-201ENST00000340611 DPM3Q9P2X0 92 aa11.86□□□□□ -0.51
BRAT1-201ENST00000340611 AVPP01185 164 aa11.85□□□□□ -0.51
BRAT1-201ENST00000340611 KIR2DS2P43631 304 aa11.85□□□□□ -0.51
BRAT1-201ENST00000340611 LCNL1Q6ZST4 164 aa11.85□□□□□ -0.51
BRAT1-201ENST00000340611 AKAP9Q99996 3911 aa11.85□□□□□ -0.51
BRAT1-201ENST00000340611 ODF3BA8MYP8 253 aa11.85□□□□□ -0.51
BRAT1-201ENST00000340611 IGLV2-23P01705 113 aa11.85□□□□□ -0.51
BRAT1-201ENST00000340611 HES1Q14469 280 aa11.85□□□□□ -0.51
BRAT1-201ENST00000340611 CYSLTR1Q9Y271 337 aa11.85□□□□□ -0.51
BRAT1-201ENST00000340611 TRAV40A0A0B4J280 105 aa11.84□□□□□ -0.51
BRAT1-201ENST00000340611 TEX50A0A1B0GTY4 177 aa11.84□□□□□ -0.51
BRAT1-201ENST00000340611 OR2J3O76001 311 aa11.84□□□□□ -0.51
BRAT1-201ENST00000340611 SAA4P35542 130 aa11.84□□□□□ -0.51
BRAT1-201ENST00000340611 XGP55808 180 aa11.84□□□□□ -0.51
BRAT1-201ENST00000340611 OR4C13Q8NGP0 309 aa11.84□□□□□ -0.51
BRAT1-201ENST00000340611 WIPF2Q8TF74 440 aaPredicted RBP11.84□□□□□ -0.51
BRAT1-201ENST00000340611 CHCHD1Q96BP2 118 aaKnown RBP11.84□□□□□ -0.51
BRAT1-201ENST00000340611 GRAMD2BQ96HH9 432 aa11.84□□□□□ -0.51
BRAT1-201ENST00000340611 FAM110AQ9BQ89 295 aa11.84□□□□□ -0.51
BRAT1-201ENST00000340611 C1QTNF4Q9BXJ3 329 aa11.84□□□□□ -0.51
BRAT1-201ENST00000340611 IGHV4-38-2P0DP08 117 aa11.84□□□□□ -0.51
BRAT1-201ENST00000340611 GPR82Q96P67 336 aa11.84□□□□□ -0.51
BRAT1-201ENST00000340611 CENPVL3A0A0U1RRI6 287 aa11.83□□□□□ -0.51
BRAT1-201ENST00000340611 F8W1H4 67 aa11.83□□□□□ -0.51
BRAT1-201ENST00000340611 PEX7O00628 323 aa11.83□□□□□ -0.51
BRAT1-201ENST00000340611 APOMO95445 188 aa11.83□□□□□ -0.51
BRAT1-201ENST00000340611 Q96MF0 132 aa11.83□□□□□ -0.51
BRAT1-201ENST00000340611 FBXL15Q9H469 300 aa11.83□□□□□ -0.51
BRAT1-201ENST00000340611 ARL3P36405 182 aa11.83□□□□□ -0.52
BRAT1-201ENST00000340611 PRCDQ00LT1 54 aa11.83□□□□□ -0.52
BRAT1-201ENST00000340611 WFDC3Q8IUB2 231 aa11.83□□□□□ -0.52
BRAT1-201ENST00000340611 CDIP1Q9H305 208 aa11.83□□□□□ -0.52
BRAT1-201ENST00000340611 C7orf69Q9H7B7 122 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms