RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 TMEM208Q9BTX3 173 aa9.58□□□□□ -0.88
SIRPB3P-201ENST00000340424 NPCDR1Q9BY65 106 aa9.58□□□□□ -0.88
SIRPB3P-201ENST00000340424 EPPK1P58107 5090 aaKnown RBP9.57□□□□□ -0.88
SIRPB3P-201ENST00000340424 F8W036 122 aa9.57□□□□□ -0.88
SIRPB3P-201ENST00000340424 HIST1H1AQ02539 215 aaPredicted RBP9.57□□□□□ -0.88
SIRPB3P-201ENST00000340424 C12orf74Q32Q52 190 aa9.57□□□□□ -0.88
SIRPB3P-201ENST00000340424 C1orf158Q8N1D5 194 aa9.57□□□□□ -0.88
SIRPB3P-201ENST00000340424 TMEM256Q8N2U0 113 aa9.57□□□□□ -0.88
SIRPB3P-201ENST00000340424 OR5C1Q8NGR4 320 aa9.57□□□□□ -0.88
SIRPB3P-201ENST00000340424 RPUSD4Q96CM3 377 aaKnown RBP9.57□□□□□ -0.88
SIRPB3P-201ENST00000340424 PPP1R14DQ9NXH3 145 aa9.57□□□□□ -0.88
SIRPB3P-201ENST00000340424 CELA1Q9UNI1 258 aa9.57□□□□□ -0.88
SIRPB3P-201ENST00000340424 KMT2AQ03164 3969 aa9.56□□□□□ -0.88
SIRPB3P-201ENST00000340424 DEFB131BA0A096LNP1 70 aa9.56□□□□□ -0.88
SIRPB3P-201ENST00000340424 BORCS7-ASMTA0A0B4J1R7 106 aa9.56□□□□□ -0.88
SIRPB3P-201ENST00000340424 LOC102723971A0A1B0GUV8 181 aa9.56□□□□□ -0.88
SIRPB3P-201ENST00000340424 IGLL5B9A064 214 aa9.56□□□□□ -0.88
SIRPB3P-201ENST00000340424 RHOBP62745 196 aa9.56□□□□□ -0.88
SIRPB3P-201ENST00000340424 NHLH2Q02577 135 aa9.56□□□□□ -0.88
SIRPB3P-201ENST00000340424 SPINK13Q1W4C9 94 aa9.56□□□□□ -0.88
SIRPB3P-201ENST00000340424 MORN5Q5VZ52 161 aa9.56□□□□□ -0.88
SIRPB3P-201ENST00000340424 SMDT1Q9H4I9 107 aa9.56□□□□□ -0.88
SIRPB3P-201ENST00000340424 TMEM14CQ9P0S9 112 aa9.56□□□□□ -0.88
SIRPB3P-201ENST00000340424 DKK2Q9UBU2 259 aa9.56□□□□□ -0.88
SIRPB3P-201ENST00000340424 M0R2Z0 102 aa9.55□□□□□ -0.88
SIRPB3P-201ENST00000340424 CRXO43186 299 aaPredicted RBP9.55□□□□□ -0.88
SIRPB3P-201ENST00000340424 TSPOP30536 169 aa9.55□□□□□ -0.88
SIRPB3P-201ENST00000340424 SRSF3P84103 164 aaKnown RBP9.55□□□□□ -0.88
SIRPB3P-201ENST00000340424 PDE6HQ13956 83 aa9.55□□□□□ -0.88
SIRPB3P-201ENST00000340424 OR10J6PQ8NGY7 276 aa9.55□□□□□ -0.88
SIRPB3P-201ENST00000340424 FAM210BQ96KR6 192 aa9.55□□□□□ -0.88
SIRPB3P-201ENST00000340424 TREM1Q9NP99 234 aa9.55□□□□□ -0.88
SIRPB3P-201ENST00000340424 APLNQ9ULZ1 77 aa9.55□□□□□ -0.88
SIRPB3P-201ENST00000340424 IGHV4-4A0A075B6R2 117 aa9.54□□□□□ -0.88
SIRPB3P-201ENST00000340424 C17orf112F2Z3M2 114 aa9.54□□□□□ -0.88
SIRPB3P-201ENST00000340424 SLC17A3O00476 420 aa9.54□□□□□ -0.88
SIRPB3P-201ENST00000340424 CDKN1BP46527 198 aa9.54□□□□□ -0.88
SIRPB3P-201ENST00000340424 EMP1P54849 157 aa9.54□□□□□ -0.88
SIRPB3P-201ENST00000340424 MRPL53Q96EL3 112 aaKnown RBP9.54□□□□□ -0.88
SIRPB3P-201ENST00000340424 C20orf144Q9BQM9 153 aa9.54□□□□□ -0.88
SIRPB3P-201ENST00000340424 NIPSNAP3BQ9BS92 247 aa9.54□□□□□ -0.88
SIRPB3P-201ENST00000340424 TRBV19A0A075B6N1 114 aa9.53□□□□□ -0.88
SIRPB3P-201ENST00000340424 H3BQ15 152 aa9.53□□□□□ -0.88
SIRPB3P-201ENST00000340424 HIST1H1EP10412 219 aaKnown RBP9.53□□□□□ -0.88
SIRPB3P-201ENST00000340424 CLINT1Q14677 625 aa9.53□□□□□ -0.88
SIRPB3P-201ENST00000340424 FAM222AQ5U5X8 452 aa9.53□□□□□ -0.88
SIRPB3P-201ENST00000340424 ODF3Q96PU9 254 aa9.53□□□□□ -0.88
SIRPB3P-201ENST00000340424 ATP5SQ99766 215 aa9.53□□□□□ -0.88
SIRPB3P-201ENST00000340424 NDUFAF3Q9BU61 184 aa9.53□□□□□ -0.88
SIRPB3P-201ENST00000340424 SSBP4Q9BWG4 385 aaPredicted RBP9.53□□□□□ -0.88
SIRPB3P-201ENST00000340424 MRPL32Q9BYC8 188 aaKnown RBP9.53□□□□□ -0.88
SIRPB3P-201ENST00000340424 WDR61Q9GZS3 305 aaKnown RBP9.53□□□□□ -0.88
SIRPB3P-201ENST00000340424 YTHDF2Q9Y5A9 579 aaKnown RBP9.53□□□□□ -0.88
SIRPB3P-201ENST00000340424 TRAV5A0A0B4J249 113 aa9.52□□□□□ -0.89
SIRPB3P-201ENST00000340424 LYRM9A8MSI8 78 aa9.52□□□□□ -0.89
SIRPB3P-201ENST00000340424 SFTA3P0C7M3 94 aa9.52□□□□□ -0.89
SIRPB3P-201ENST00000340424 TAS2R60P59551 318 aa9.52□□□□□ -0.89
SIRPB3P-201ENST00000340424 PEA15Q15121 130 aa9.52□□□□□ -0.89
SIRPB3P-201ENST00000340424 LINC00518Q8N0U6 118 aa9.52□□□□□ -0.89
SIRPB3P-201ENST00000340424 C15orf54Q8N8G6 183 aa9.52□□□□□ -0.89
SIRPB3P-201ENST00000340424 SMCO4Q9NRQ5 59 aa9.52□□□□□ -0.89
SIRPB3P-201ENST00000340424 ZNF586Q9NXT0 402 aa9.52□□□□□ -0.89
SIRPB3P-201ENST00000340424 DNAH6Q9C0G6 4158 aa9.52□□□□□ -0.89
SIRPB3P-201ENST00000340424 TRAV12-2A0A075B6T6 113 aa9.51□□□□□ -0.89
SIRPB3P-201ENST00000340424 UMAD1C9J7I0 102 aa9.51□□□□□ -0.89
SIRPB3P-201ENST00000340424 H3BTX0 84 aa9.51□□□□□ -0.89
SIRPB3P-201ENST00000340424 H7BYZ3 331 aa9.51□□□□□ -0.89
SIRPB3P-201ENST00000340424 SNRPCP09234 159 aaKnown RBP9.51□□□□□ -0.89
SIRPB3P-201ENST00000340424 ZNF266Q14584 549 aa9.51□□□□□ -0.89
SIRPB3P-201ENST00000340424 RNF212Q495C1 297 aa9.51□□□□□ -0.89
SIRPB3P-201ENST00000340424 ZNF493Q6ZR52 646 aa9.51□□□□□ -0.89
SIRPB3P-201ENST00000340424 RPP25LQ8N5L8 163 aaKnown RBP9.51□□□□□ -0.89
SIRPB3P-201ENST00000340424 C16orf74Q96GX8 76 aa9.51□□□□□ -0.89
SIRPB3P-201ENST00000340424 LINC01587Q99440 93 aa9.51□□□□□ -0.89
SIRPB3P-201ENST00000340424 PARD6GQ9BYG4 376 aaPredicted RBP9.51□□□□□ -0.89
SIRPB3P-201ENST00000340424 WFDC1Q9HC57 220 aa9.51□□□□□ -0.89
SIRPB3P-201ENST00000340424 TIMM9Q9Y5J7 89 aa9.51□□□□□ -0.89
SIRPB3P-201ENST00000340424 BIRC6Q9NR09 4857 aa9.51□□□□□ -0.89
SIRPB3P-201ENST00000340424 COLCA2A8K830 154 aa9.5□□□□□ -0.89
SIRPB3P-201ENST00000340424 NPIPB6E9PJ23 425 aa9.5□□□□□ -0.89
SIRPB3P-201ENST00000340424 IFNA5P01569 189 aa9.5□□□□□ -0.89
SIRPB3P-201ENST00000340424 LEPP41159 167 aa9.5□□□□□ -0.89
SIRPB3P-201ENST00000340424 DAD1P61803 113 aa9.5□□□□□ -0.89
SIRPB3P-201ENST00000340424 CBLN2Q8IUK8 224 aa9.5□□□□□ -0.89
SIRPB3P-201ENST00000340424 IQCF2Q8IXL9 164 aa9.5□□□□□ -0.89
SIRPB3P-201ENST00000340424 SCGB1C1Q8TD33 95 aa9.5□□□□□ -0.89
SIRPB3P-201ENST00000340424 SLC25A2Q9BXI2 301 aa9.5□□□□□ -0.89
SIRPB3P-201ENST00000340424 AAMDCQ9H7C9 122 aa9.5□□□□□ -0.89
SIRPB3P-201ENST00000340424 BIN3Q9NQY0 253 aa9.5□□□□□ -0.89
SIRPB3P-201ENST00000340424 ZNF705GA8MUZ8 300 aaPredicted RBP9.49□□□□□ -0.89
SIRPB3P-201ENST00000340424 C9JQL5 133 aa9.49□□□□□ -0.89
SIRPB3P-201ENST00000340424 P0DMU3 169 aa9.49□□□□□ -0.89
SIRPB3P-201ENST00000340424 FAM231AP0DMU4 169 aa9.49□□□□□ -0.89
SIRPB3P-201ENST00000340424 FAM231CP0DMU5 169 aa9.49□□□□□ -0.89
SIRPB3P-201ENST00000340424 RHEBQ15382 184 aa9.49□□□□□ -0.89
SIRPB3P-201ENST00000340424 GCSAMLQ5JQS6 135 aa9.49□□□□□ -0.89
SIRPB3P-201ENST00000340424 TMEM88Q6PEY1 159 aa9.49□□□□□ -0.89
SIRPB3P-201ENST00000340424 DPPA3Q6W0C5 159 aa9.49□□□□□ -0.89
SIRPB3P-201ENST00000340424 FUT9Q9Y231 359 aa9.49□□□□□ -0.89
SIRPB3P-201ENST00000340424 DNAH10Q8IVF4 4471 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms