RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 DPM3Q9P2X0 92 aa11.16□□□□□ -0.62
PCDH8-201ENST00000338862 TRAV40A0A0B4J280 105 aa11.16□□□□□ -0.62
PCDH8-201ENST00000338862 SEC11AP67812 179 aa11.16□□□□□ -0.62
PCDH8-201ENST00000338862 FAM71F2Q6NXP2 309 aa11.16□□□□□ -0.62
PCDH8-201ENST00000338862 ZNF491Q8N8L2 437 aa11.16□□□□□ -0.62
PCDH8-201ENST00000338862 PRSS22Q9GZN4 317 aa11.16□□□□□ -0.62
PCDH8-201ENST00000338862 AKAP13Q12802 2813 aa11.15□□□□□ -0.62
PCDH8-201ENST00000338862 F5H697 171 aa11.15□□□□□ -0.62
PCDH8-201ENST00000338862 H7C2G1 150 aa11.15□□□□□ -0.62
PCDH8-201ENST00000338862 BMI1P35226 326 aa11.15□□□□□ -0.62
PCDH8-201ENST00000338862 CRIP1P50238 77 aa11.15□□□□□ -0.62
PCDH8-201ENST00000338862 SRSF9Q13242 221 aaKnown RBP eCLIP11.15□□□□□ -0.62
PCDH8-201ENST00000338862 TMEM30BQ3MIR4 351 aa11.15□□□□□ -0.62
PCDH8-201ENST00000338862 UBTD1Q9HAC8 227 aa11.15□□□□□ -0.62
PCDH8-201ENST00000338862 KLF12Q9Y4X4 402 aa11.15□□□□□ -0.62
PCDH8-201ENST00000338862 GRNP28799 593 aaKnown RBP11.14□□□□□ -0.63
PCDH8-201ENST00000338862 LINC01545Q5VT33 79 aa11.14□□□□□ -0.63
PCDH8-201ENST00000338862 H3BVH4 76 aa11.14□□□□□ -0.63
PCDH8-201ENST00000338862 FCN3O75636 299 aa11.14□□□□□ -0.63
PCDH8-201ENST00000338862 CEACAM3P40198 252 aa11.14□□□□□ -0.63
PCDH8-201ENST00000338862 SMIM12Q96EX1 92 aa11.14□□□□□ -0.63
PCDH8-201ENST00000338862 MYO9AB2RTY4 2548 aa11.14□□□□□ -0.63
PCDH8-201ENST00000338862 C19orf67A6NJJ6 358 aa11.14□□□□□ -0.63
PCDH8-201ENST00000338862 HSD52Q0P140 79 aa11.14□□□□□ -0.63
PCDH8-201ENST00000338862 SIGLEC15Q6ZMC9 328 aa11.14□□□□□ -0.63
PCDH8-201ENST00000338862 ARPC1AQ92747 370 aa11.14□□□□□ -0.63
PCDH8-201ENST00000338862 GFRA4Q9GZZ7 299 aa11.14□□□□□ -0.63
PCDH8-201ENST00000338862 ASH1LQ9NR48 2969 aaKnown RBP11.14□□□□□ -0.63
PCDH8-201ENST00000338862 NDUFS7O75251 213 aa11.13□□□□□ -0.63
PCDH8-201ENST00000338862 HTN1P15515 57 aa11.13□□□□□ -0.63
PCDH8-201ENST00000338862 EFNA4P52798 201 aa11.13□□□□□ -0.63
PCDH8-201ENST00000338862 RBPJQ06330 500 aa11.13□□□□□ -0.63
PCDH8-201ENST00000338862 CT83Q5H943 113 aa11.13□□□□□ -0.63
PCDH8-201ENST00000338862 C7orf69Q9H7B7 122 aa11.13□□□□□ -0.63
PCDH8-201ENST00000338862 TNRC6BQ9UPQ9 1833 aaKnown RBP11.13□□□□□ -0.63
PCDH8-201ENST00000338862 APOBEC3AP31941 199 aaPredicted RBP11.13□□□□□ -0.63
PCDH8-201ENST00000338862 PLA2G2CQ5R387 149 aa11.13□□□□□ -0.63
PCDH8-201ENST00000338862 TMEM78Q5T7P6 136 aa11.13□□□□□ -0.63
PCDH8-201ENST00000338862 JMJD8Q96S16 334 aa11.13□□□□□ -0.63
PCDH8-201ENST00000338862 WNK1Q9H4A3 2382 aa11.13□□□□□ -0.63
PCDH8-201ENST00000338862 C9orf118A6NHY6 69 aa11.13□□□□□ -0.63
PCDH8-201ENST00000338862 ZNF418Q8TF45 676 aaPredicted RBP11.13□□□□□ -0.63
PCDH8-201ENST00000338862 TLN2Q9Y4G6 2542 aa11.13□□□□□ -0.63
PCDH8-201ENST00000338862 USP9YO00507 2555 aaPredicted RBP11.13□□□□□ -0.63
PCDH8-201ENST00000338862 APOMO95445 188 aa11.12□□□□□ -0.63
PCDH8-201ENST00000338862 CYSLTR1Q9Y271 337 aa11.12□□□□□ -0.63
PCDH8-201ENST00000338862 K7EIM0 57 aa11.12□□□□□ -0.63
PCDH8-201ENST00000338862 THBDP07204 575 aa11.12□□□□□ -0.63
PCDH8-201ENST00000338862 SRD5A1P18405 259 aa11.12□□□□□ -0.63
PCDH8-201ENST00000338862 MYCNOSP40205 109 aa11.12□□□□□ -0.63
PCDH8-201ENST00000338862 FXYD2P54710 66 aa11.12□□□□□ -0.63
PCDH8-201ENST00000338862 TMEM8BA6NDV4 472 aa11.12□□□□□ -0.63
PCDH8-201ENST00000338862 FABP5P3A8MUU1 101 aa11.12□□□□□ -0.63
PCDH8-201ENST00000338862 TEX22C9J3V5 150 aa11.12□□□□□ -0.63
PCDH8-201ENST00000338862 CCL21O00585 134 aa11.12□□□□□ -0.63
PCDH8-201ENST00000338862 IGKV3-20P01619 116 aa11.12□□□□□ -0.63
PCDH8-201ENST00000338862 ETDBQ3ZM63 59 aa11.12□□□□□ -0.63
PCDH8-201ENST00000338862 ZNF672Q499Z4 452 aaPredicted RBP11.12□□□□□ -0.63
PCDH8-201ENST00000338862 IL17RELQ6ZVW7 336 aa11.12□□□□□ -0.63
PCDH8-201ENST00000338862 RELNP78509 3460 aa11.12□□□□□ -0.63
PCDH8-201ENST00000338862 COL12A1Q99715 3063 aa11.12□□□□□ -0.63
PCDH8-201ENST00000338862 DEFB1P60022 68 aa11.11□□□□□ -0.63
PCDH8-201ENST00000338862 C16orf92Q96LL3 132 aa11.11□□□□□ -0.63
PCDH8-201ENST00000338862 VKORC1Q9BQB6 163 aa11.11□□□□□ -0.63
PCDH8-201ENST00000338862 ACACBO00763 2458 aa11.11□□□□□ -0.63
PCDH8-201ENST00000338862 TNFRSF6BO95407 300 aa11.11□□□□□ -0.63
PCDH8-201ENST00000338862 IGKCP01834 107 aa11.11□□□□□ -0.63
PCDH8-201ENST00000338862 SCGB1C2P0DMR2 95 aa11.11□□□□□ -0.63
PCDH8-201ENST00000338862 ZNF80P51504 273 aaPredicted RBP11.11□□□□□ -0.63
PCDH8-201ENST00000338862 C2orf91Q6ZV80 131 aa11.11□□□□□ -0.63
PCDH8-201ENST00000338862 PRR25Q96S07 402 aa11.11□□□□□ -0.63
PCDH8-201ENST00000338862 PRAC2D3DTV9 90 aa11.11□□□□□ -0.63
PCDH8-201ENST00000338862 I3L2K1 104 aa11.11□□□□□ -0.63
PCDH8-201ENST00000338862 Q6ZS92 163 aa11.11□□□□□ -0.63
PCDH8-201ENST00000338862 CHAC1Q9BUX1 264 aa11.11□□□□□ -0.63
PCDH8-201ENST00000338862 H3BMG7 143 aa11.1□□□□□ -0.63
PCDH8-201ENST00000338862 C15orf32Q32M92 178 aa11.1□□□□□ -0.63
PCDH8-201ENST00000338862 SH2D6Q7Z4S9 175 aa11.1□□□□□ -0.63
PCDH8-201ENST00000338862 RAI1Q7Z5J4 1906 aaPredicted RBP11.1□□□□□ -0.63
PCDH8-201ENST00000338862 IGLV2-11P01706 119 aa11.1□□□□□ -0.63
PCDH8-201ENST00000338862 PAX2Q02962 417 aa11.1□□□□□ -0.63
PCDH8-201ENST00000338862 PVRIGQ6DKI7 326 aa11.1□□□□□ -0.63
PCDH8-201ENST00000338862 TMEM219Q86XT9 240 aa11.1□□□□□ -0.63
PCDH8-201ENST00000338862 TEX48A0A1B0GUV7 120 aa11.1□□□□□ -0.63
PCDH8-201ENST00000338862 A0A1B0GWB2 263 aa11.1□□□□□ -0.63
PCDH8-201ENST00000338862 IGHV3-11P01762 117 aa11.1□□□□□ -0.63
PCDH8-201ENST00000338862 SAMD13Q5VXD3 122 aa11.1□□□□□ -0.63
PCDH8-201ENST00000338862 ADAMTSL5Q6ZMM2 481 aa11.1□□□□□ -0.63
PCDH8-201ENST00000338862 CSTL1Q9H114 145 aa11.1□□□□□ -0.63
PCDH8-201ENST00000338862 IGKV2D-26A0A0A0MRZ7 120 aa11.09□□□□□ -0.63
PCDH8-201ENST00000338862 H3BRN7 92 aa11.09□□□□□ -0.63
PCDH8-201ENST00000338862 SMIM17P0DL12 118 aa11.09□□□□□ -0.63
PCDH8-201ENST00000338862 Q6AWC8 147 aa11.09□□□□□ -0.63
PCDH8-201ENST00000338862 NEGR1Q7Z3B1 354 aa11.09□□□□□ -0.63
PCDH8-201ENST00000338862 MRPL35Q9NZE8 188 aaKnown RBP11.09□□□□□ -0.63
PCDH8-201ENST00000338862 AGRNO00468 2067 aa11.09□□□□□ -0.63
PCDH8-201ENST00000338862 G3V318 75 aa11.09□□□□□ -0.63
PCDH8-201ENST00000338862 J3QR89 54 aa11.09□□□□□ -0.63
PCDH8-201ENST00000338862 NUP37Q8NFH4 326 aa11.09□□□□□ -0.63
PCDH8-201ENST00000338862 NCOR1P1Q9H4R4 102 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms