RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 APCP25054 2843 aa6.83□□□□□ -1.32
SNCA-201ENST00000336904 TENM4Q6N022 2769 aa6.82□□□□□ -1.32
SNCA-201ENST00000336904 TRAV41A0A0B4J266 112 aa6.82□□□□□ -1.32
SNCA-201ENST00000336904 TMEM189A5PLL7 270 aa6.82□□□□□ -1.32
SNCA-201ENST00000336904 PF4V1P10720 104 aa6.82□□□□□ -1.32
SNCA-201ENST00000336904 SFTPCP11686 197 aa6.82□□□□□ -1.32
SNCA-201ENST00000336904 RPL7P18124 248 aaKnown RBP6.82□□□□□ -1.32
SNCA-201ENST00000336904 WIPF2Q8TF74 440 aaPredicted RBP6.82□□□□□ -1.32
SNCA-201ENST00000336904 NOTCH3Q9UM47 2321 aa6.82□□□□□ -1.32
SNCA-201ENST00000336904 LOC102724200A0A096LPH7 203 aaPredicted RBP6.82□□□□□ -1.32
SNCA-201ENST00000336904 IGHV1-24A0A0C4DH33 117 aa6.82□□□□□ -1.32
SNCA-201ENST00000336904 A0A1B0GUT8 65 aa6.82□□□□□ -1.32
SNCA-201ENST00000336904 F6UB75 175 aa6.82□□□□□ -1.32
SNCA-201ENST00000336904 ESDP10768 282 aa6.82□□□□□ -1.32
SNCA-201ENST00000336904 KRTAP10-9P60411 292 aa6.82□□□□□ -1.32
SNCA-201ENST00000336904 HIST2H2BCQ6DN03 193 aa6.82□□□□□ -1.32
SNCA-201ENST00000336904 Q6ZVH6 145 aa6.82□□□□□ -1.32
SNCA-201ENST00000336904 C10orf105Q8TEF2 133 aa6.82□□□□□ -1.32
SNCA-201ENST00000336904 PRR25Q96S07 402 aa6.82□□□□□ -1.32
SNCA-201ENST00000336904 ZNF492Q9P255 531 aa6.82□□□□□ -1.32
SNCA-201ENST00000336904 WNK1Q9H4A3 2382 aa6.82□□□□□ -1.32
SNCA-201ENST00000336904 PRRC2AP48634 2157 aaKnown RBP6.82□□□□□ -1.32
SNCA-201ENST00000336904 KIR2DL5BA0A0G2JN68 375 aa6.82□□□□□ -1.32
SNCA-201ENST00000336904 KIR2DL5BA0A0G2JPC4 375 aa6.82□□□□□ -1.32
SNCA-201ENST00000336904 hDV102S1A0JD36 115 aa6.82□□□□□ -1.32
SNCA-201ENST00000336904 SMAD7O15105 426 aaKnown RBP6.82□□□□□ -1.32
SNCA-201ENST00000336904 BUB3O43684 328 aa6.82□□□□□ -1.32
SNCA-201ENST00000336904 TEX43Q6ZNM6 134 aa6.82□□□□□ -1.32
SNCA-201ENST00000336904 KIR2DL5AQ8N109 375 aa6.82□□□□□ -1.32
SNCA-201ENST00000336904 MTORP42345 2549 aa6.81□□□□□ -1.32
SNCA-201ENST00000336904 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.81□□□□□ -1.32
SNCA-201ENST00000336904 D6R8Y8 96 aa6.81□□□□□ -1.32
SNCA-201ENST00000336904 NPIPB6E9PJ23 425 aa6.81□□□□□ -1.32
SNCA-201ENST00000336904 KIR3DS1Q14943 382 aa6.81□□□□□ -1.32
SNCA-201ENST00000336904 TWIST1Q15672 202 aa6.81□□□□□ -1.32
SNCA-201ENST00000336904 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.81□□□□□ -1.32
SNCA-201ENST00000336904 UBR5O95071 2799 aaPredicted RBP6.81□□□□□ -1.32
SNCA-201ENST00000336904 OOSP1A8MZH6 123 aa6.81□□□□□ -1.32
SNCA-201ENST00000336904 GATA1P15976 413 aaPredicted RBP6.81□□□□□ -1.32
SNCA-201ENST00000336904 EVI2AP22794 236 aa6.81□□□□□ -1.32
SNCA-201ENST00000336904 ATP5G2Q06055 141 aa6.81□□□□□ -1.32
SNCA-201ENST00000336904 PAX8Q06710 450 aa6.81□□□□□ -1.32
SNCA-201ENST00000336904 SNAI2O43623 268 aa6.8□□□□□ -1.32
SNCA-201ENST00000336904 GOSR1O95249 250 aa6.8□□□□□ -1.32
SNCA-201ENST00000336904 IFI27P40305 119 aaPredicted RBP6.8□□□□□ -1.32
SNCA-201ENST00000336904 FOXE3Q13461 319 aa6.8□□□□□ -1.32
SNCA-201ENST00000336904 ERASQ7Z444 233 aa6.8□□□□□ -1.32
SNCA-201ENST00000336904 MOB4Q9Y3A3 225 aa6.8□□□□□ -1.32
SNCA-201ENST00000336904 IGHV4-59P01825 116 aa6.8□□□□□ -1.32
SNCA-201ENST00000336904 ARL3P36405 182 aa6.8□□□□□ -1.32
SNCA-201ENST00000336904 FAM162BQ5T6X4 162 aa6.8□□□□□ -1.32
SNCA-201ENST00000336904 EEF1AKMT3Q96AZ1 226 aa6.8□□□□□ -1.32
SNCA-201ENST00000336904 C11orf21Q9P2W6 132 aa6.8□□□□□ -1.32
SNCA-201ENST00000336904 ZFP30Q9Y2G7 519 aa6.8□□□□□ -1.32
SNCA-201ENST00000336904 AGRNO00468 2067 aa6.8□□□□□ -1.32
SNCA-201ENST00000336904 FLNAP21333 2647 aaKnown RBP6.79□□□□□ -1.32
SNCA-201ENST00000336904 LINC00614P0C842 121 aa6.79□□□□□ -1.32
SNCA-201ENST00000336904 C8orf86Q6ZUL3 223 aa6.79□□□□□ -1.32
SNCA-201ENST00000336904 ATP5L2Q7Z4Y8 100 aa6.79□□□□□ -1.32
SNCA-201ENST00000336904 C20orf173Q96LM9 149 aa6.79□□□□□ -1.32
SNCA-201ENST00000336904 TXN2Q99757 166 aa6.79□□□□□ -1.32
SNCA-201ENST00000336904 TRAV8-2A0A0B4J237 113 aa6.79□□□□□ -1.32
SNCA-201ENST00000336904 C2orf70A6NJV1 201 aa6.79□□□□□ -1.32
SNCA-201ENST00000336904 MSMBP08118 114 aa6.79□□□□□ -1.32
SNCA-201ENST00000336904 PSG9Q00887 426 aa6.79□□□□□ -1.32
SNCA-201ENST00000336904 TM4SF20Q53R12 229 aa6.79□□□□□ -1.32
SNCA-201ENST00000336904 Q6ZN92 141 aa6.79□□□□□ -1.32
SNCA-201ENST00000336904 AGPAT4-IT1Q9H0P7 198 aa6.79□□□□□ -1.32
SNCA-201ENST00000336904 ITPR3Q14573 2671 aa6.79□□□□□ -1.32
SNCA-201ENST00000336904 TRAV26-2A0A0B4J265 109 aa6.79□□□□□ -1.32
SNCA-201ENST00000336904 LEPROTL1O95214 131 aa6.79□□□□□ -1.32
SNCA-201ENST00000336904 COX19Q49B96 90 aa6.79□□□□□ -1.32
SNCA-201ENST00000336904 DNLZQ5SXM8 178 aa6.79□□□□□ -1.32
SNCA-201ENST00000336904 PRR9Q5T870 116 aa6.79□□□□□ -1.32
SNCA-201ENST00000336904 ZNF575Q86XF7 245 aa6.79□□□□□ -1.32
SNCA-201ENST00000336904 LINC00469Q8N7U9 141 aa6.79□□□□□ -1.32
SNCA-201ENST00000336904 PRSS3P2Q8NHM4 247 aa6.79□□□□□ -1.32
SNCA-201ENST00000336904 METTL26Q96S19 204 aa6.79□□□□□ -1.32
SNCA-201ENST00000336904 RNF223E7ERA6 249 aa6.78□□□□□ -1.32
SNCA-201ENST00000336904 HAX1O00165 279 aa6.78□□□□□ -1.32
SNCA-201ENST00000336904 TGFAP01135 160 aa6.78□□□□□ -1.32
SNCA-201ENST00000336904 CT83Q5H943 113 aa6.78□□□□□ -1.32
SNCA-201ENST00000336904 OR8A1Q8NGG7 326 aa6.78□□□□□ -1.32
SNCA-201ENST00000336904 C16orf92Q96LL3 132 aa6.78□□□□□ -1.32
SNCA-201ENST00000336904 IGKV3-20P01619 116 aa6.78□□□□□ -1.32
SNCA-201ENST00000336904 IGLL1P15814 213 aa6.78□□□□□ -1.32
SNCA-201ENST00000336904 BTF3P20290 206 aaKnown RBP6.78□□□□□ -1.32
SNCA-201ENST00000336904 RIGQ13278 110 aa6.78□□□□□ -1.32
SNCA-201ENST00000336904 KLF5Q13887 457 aaPredicted RBP6.78□□□□□ -1.32
SNCA-201ENST00000336904 CYB5R2Q6BCY4 276 aa6.78□□□□□ -1.32
SNCA-201ENST00000336904 RASL11AQ6T310 242 aa6.78□□□□□ -1.32
SNCA-201ENST00000336904 LYPD1Q8N2G4 141 aa6.78□□□□□ -1.32
SNCA-201ENST00000336904 SMIM12Q96EX1 92 aa6.78□□□□□ -1.32
SNCA-201ENST00000336904 C18orf15Q96N68 181 aa6.78□□□□□ -1.32
SNCA-201ENST00000336904 HINT1P49773 126 aaPredicted RBP6.77□□□□□ -1.33
SNCA-201ENST00000336904 PDE6HQ13956 83 aa6.77□□□□□ -1.33
SNCA-201ENST00000336904 DEFB112Q30KQ8 113 aa6.77□□□□□ -1.33
SNCA-201ENST00000336904 PRSS57Q6UWY2 283 aa6.77□□□□□ -1.33
SNCA-201ENST00000336904 FER1L6-AS1Q8NA97 138 aa6.77□□□□□ -1.33
SNCA-201ENST00000336904 MIEN1Q9BRT3 115 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms