RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 PPP1R14DQ9NXH3 145 aa10.18□□□□□ -0.78
CTHRC1-201ENST00000330295 F5H768 121 aa10.17□□□□□ -0.78
CTHRC1-201ENST00000330295 DNAH10OSP0CZ25 163 aa10.17□□□□□ -0.78
CTHRC1-201ENST00000330295 RNF141Q8WVD5 230 aa10.17□□□□□ -0.78
CTHRC1-201ENST00000330295 ATP5SQ99766 215 aa10.17□□□□□ -0.78
CTHRC1-201ENST00000330295 MBD2Q9UBB5 411 aa10.17□□□□□ -0.78
CTHRC1-201ENST00000330295 LOC102723971A0A1B0GUV8 181 aa10.16□□□□□ -0.78
CTHRC1-201ENST00000330295 PSG3Q16557 428 aa10.16□□□□□ -0.78
CTHRC1-201ENST00000330295 UPK3BQ9BT76 320 aa10.16□□□□□ -0.78
CTHRC1-201ENST00000330295 WDR61Q9GZS3 305 aaKnown RBP10.16□□□□□ -0.78
CTHRC1-201ENST00000330295 GOLT1BQ9Y3E0 138 aa10.16□□□□□ -0.78
CTHRC1-201ENST00000330295 HSPB11Q9Y547 144 aa10.16□□□□□ -0.78
CTHRC1-201ENST00000330295 PKHD1L1Q86WI1 4243 aa10.15□□□□□ -0.78
CTHRC1-201ENST00000330295 A0A087WTM6 91 aa10.15□□□□□ -0.78
CTHRC1-201ENST00000330295 F6UB75 175 aa10.15□□□□□ -0.78
CTHRC1-201ENST00000330295 CXCL3P19876 107 aa10.15□□□□□ -0.78
CTHRC1-201ENST00000330295 RHOBP62745 196 aa10.15□□□□□ -0.78
CTHRC1-201ENST00000330295 GDF5OSQ5U4N7 250 aa10.15□□□□□ -0.78
CTHRC1-201ENST00000330295 RNF182Q8N6D2 247 aa10.15□□□□□ -0.78
CTHRC1-201ENST00000330295 C20orf173Q96LM9 149 aa10.15□□□□□ -0.78
CTHRC1-201ENST00000330295 TRAV8-2A0A0B4J237 113 aa10.14□□□□□ -0.79
CTHRC1-201ENST00000330295 HBE1P02100 147 aa10.14□□□□□ -0.79
CTHRC1-201ENST00000330295 DEFB1P60022 68 aa10.14□□□□□ -0.79
CTHRC1-201ENST00000330295 FCN2Q15485 313 aa10.14□□□□□ -0.79
CTHRC1-201ENST00000330295 RPUSD4Q96CM3 377 aaKnown RBP10.14□□□□□ -0.79
CTHRC1-201ENST00000330295 TMEM208Q9BTX3 173 aa10.14□□□□□ -0.79
CTHRC1-201ENST00000330295 ZNF331Q9NQX6 463 aaPredicted RBP10.14□□□□□ -0.79
CTHRC1-201ENST00000330295 TIMM9Q9Y5J7 89 aa10.14□□□□□ -0.79
CTHRC1-201ENST00000330295 MRPS12O15235 138 aaKnown RBP10.13□□□□□ -0.79
CTHRC1-201ENST00000330295 GIPP09681 153 aaPredicted RBP10.13□□□□□ -0.79
CTHRC1-201ENST00000330295 CNN1P51911 297 aaKnown RBP10.13□□□□□ -0.79
CTHRC1-201ENST00000330295 FXYD7P58549 80 aa10.13□□□□□ -0.79
CTHRC1-201ENST00000330295 HIST1H1AQ02539 215 aaPredicted RBP10.13□□□□□ -0.79
CTHRC1-201ENST00000330295 IGFL4Q6B9Z1 124 aa10.13□□□□□ -0.79
CTHRC1-201ENST00000330295 OR8A1Q8NGG7 326 aa10.13□□□□□ -0.79
CTHRC1-201ENST00000330295 OR10J6PQ8NGY7 276 aa10.13□□□□□ -0.79
CTHRC1-201ENST00000330295 MRPL32Q9BYC8 188 aaKnown RBP10.13□□□□□ -0.79
CTHRC1-201ENST00000330295 SMIM3Q9BZL3 60 aa10.13□□□□□ -0.79
CTHRC1-201ENST00000330295 TMEM14CQ9P0S9 112 aa10.13□□□□□ -0.79
CTHRC1-201ENST00000330295 ZNF253O75346 499 aa10.12□□□□□ -0.79
CTHRC1-201ENST00000330295 IGLC2P0DOY2 106 aa10.12□□□□□ -0.79
CTHRC1-201ENST00000330295 HIST1H1EP10412 219 aaKnown RBP10.12□□□□□ -0.79
CTHRC1-201ENST00000330295 RRN3P1Q2M238 152 aa10.12□□□□□ -0.79
CTHRC1-201ENST00000330295 INO80EQ8NBZ0 244 aaPredicted RBP10.12□□□□□ -0.79
CTHRC1-201ENST00000330295 SLC35B3Q9H1N7 401 aa10.12□□□□□ -0.79
CTHRC1-201ENST00000330295 TRAV5A0A0B4J249 113 aa10.11□□□□□ -0.79
CTHRC1-201ENST00000330295 INSP01308 110 aa10.11□□□□□ -0.79
CTHRC1-201ENST00000330295 TSPOP30536 169 aa10.11□□□□□ -0.79
CTHRC1-201ENST00000330295 TAS2R45P59539 299 aa10.11□□□□□ -0.79
CTHRC1-201ENST00000330295 PDE6HQ13956 83 aa10.11□□□□□ -0.79
CTHRC1-201ENST00000330295 ZNF266Q14584 549 aa10.11□□□□□ -0.79
CTHRC1-201ENST00000330295 FFAR4Q5NUL3 377 aa10.11□□□□□ -0.79
CTHRC1-201ENST00000330295 MORN5Q5VZ52 161 aa10.11□□□□□ -0.79
CTHRC1-201ENST00000330295 OR11H7Q8NGC8 314 aa10.11□□□□□ -0.79
CTHRC1-201ENST00000330295 IGF2BP2-AS1Q96M15 143 aa10.11□□□□□ -0.79
CTHRC1-201ENST00000330295 PARD6GQ9BYG4 376 aaPredicted RBP10.11□□□□□ -0.79
CTHRC1-201ENST00000330295 AAMDCQ9H7C9 122 aa10.11□□□□□ -0.79
CTHRC1-201ENST00000330295 PRELID1Q9Y255 219 aa10.11□□□□□ -0.79
CTHRC1-201ENST00000330295 LYRM9A8MSI8 78 aa10.1□□□□□ -0.79
CTHRC1-201ENST00000330295 A8MTW9 85 aa10.1□□□□□ -0.79
CTHRC1-201ENST00000330295 H3BQ15 152 aa10.1□□□□□ -0.79
CTHRC1-201ENST00000330295 H3BTX0 84 aa10.1□□□□□ -0.79
CTHRC1-201ENST00000330295 BOLA2-SMG1P6H3BVE0 249 aa10.1□□□□□ -0.79
CTHRC1-201ENST00000330295 SNRPCP09234 159 aaKnown RBP10.1□□□□□ -0.79
CTHRC1-201ENST00000330295 DEFB130BP0DP73 79 aa10.1□□□□□ -0.79
CTHRC1-201ENST00000330295 DEFB130AP0DP74 79 aa10.1□□□□□ -0.79
CTHRC1-201ENST00000330295 PRB4P10163 310 aaPredicted RBP10.1□□□□□ -0.79
CTHRC1-201ENST00000330295 ASIPP42127 132 aa10.1□□□□□ -0.79
CTHRC1-201ENST00000330295 FUT9Q9Y231 359 aa10.1□□□□□ -0.79
CTHRC1-201ENST00000330295 MRPS16Q9Y3D3 137 aaKnown RBP10.1□□□□□ -0.79
CTHRC1-201ENST00000330295 DNAH8Q96JB1 4490 aa10.1□□□□□ -0.79
CTHRC1-201ENST00000330295 TRBV19A0A075B6N1 114 aa10.09□□□□□ -0.79
CTHRC1-201ENST00000330295 ATP5G1P05496 136 aa10.09□□□□□ -0.79
CTHRC1-201ENST00000330295 ATP5G3P48201 142 aa10.09□□□□□ -0.79
CTHRC1-201ENST00000330295 ESRGQ1W209 222 aa10.09□□□□□ -0.79
CTHRC1-201ENST00000330295 SPINK13Q1W4C9 94 aa10.09□□□□□ -0.79
CTHRC1-201ENST00000330295 ACOT6Q3I5F7 207 aaPredicted RBP10.09□□□□□ -0.79
CTHRC1-201ENST00000330295 GCSAMLQ5JQS6 135 aa10.09□□□□□ -0.79
CTHRC1-201ENST00000330295 C1orf158Q8N1D5 194 aa10.09□□□□□ -0.79
CTHRC1-201ENST00000330295 MRPL53Q96EL3 112 aaKnown RBP10.09□□□□□ -0.79
CTHRC1-201ENST00000330295 SAT2Q96F10 170 aaPredicted RBP10.09□□□□□ -0.79
CTHRC1-201ENST00000330295 PAXXQ9BUH6 204 aa10.09□□□□□ -0.79
CTHRC1-201ENST00000330295 OR51M1Q9H341 326 aa10.09□□□□□ -0.79
CTHRC1-201ENST00000330295 FAM30AQ9NZY2 134 aa10.09□□□□□ -0.79
CTHRC1-201ENST00000330295 A0A1W2PPV4 95 aa10.08□□□□□ -0.8
CTHRC1-201ENST00000330295 M0R2Z0 102 aa10.08□□□□□ -0.8
CTHRC1-201ENST00000330295 OR7C2O60412 319 aa10.08□□□□□ -0.8
CTHRC1-201ENST00000330295 NBEAP1P0C6P0 100 aa10.08□□□□□ -0.8
CTHRC1-201ENST00000330295 AMTNQ6UX39 209 aa10.08□□□□□ -0.8
CTHRC1-201ENST00000330295 MIR17HGQ75NE6 70 aa10.08□□□□□ -0.8
CTHRC1-201ENST00000330295 TMEM256Q8N2U0 113 aa10.08□□□□□ -0.8
CTHRC1-201ENST00000330295 BLNKQ8WV28 456 aa10.08□□□□□ -0.8
CTHRC1-201ENST00000330295 AQP10Q96PS8 301 aa10.08□□□□□ -0.8
CTHRC1-201ENST00000330295 FXYD6-FXYD2A0A087WZ82 144 aa10.07□□□□□ -0.8
CTHRC1-201ENST00000330295 SLC17A3O00476 420 aa10.07□□□□□ -0.8
CTHRC1-201ENST00000330295 PYYP10082 97 aa10.07□□□□□ -0.8
CTHRC1-201ENST00000330295 CDKN1BP46527 198 aa10.07□□□□□ -0.8
CTHRC1-201ENST00000330295 KHDC3LQ587J8 217 aa10.07□□□□□ -0.8
CTHRC1-201ENST00000330295 OR2T35Q8NGX2 323 aa10.07□□□□□ -0.8
CTHRC1-201ENST00000330295 SLC25A2Q9BXI2 301 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms