RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 GZMBP10144 247 aa11.37□□□□□ -0.59
TPM3-205ENST00000328159 FAM162BQ5T6X4 162 aa11.37□□□□□ -0.59
TPM3-205ENST00000328159 PGLYRP4Q96LB8 373 aa11.37□□□□□ -0.59
TPM3-205ENST00000328159 UBE2E2Q96LR5 201 aa11.37□□□□□ -0.59
TPM3-205ENST00000328159 NDFIP1Q9BT67 221 aa11.37□□□□□ -0.59
TPM3-205ENST00000328159 SMPXQ9UHP9 88 aa11.37□□□□□ -0.59
TPM3-205ENST00000328159 UFC1Q9Y3C8 167 aa11.37□□□□□ -0.59
TPM3-205ENST00000328159 C12orf57Q99622 126 aa11.36□□□□□ -0.59
TPM3-205ENST00000328159 SONP18583 2426 aaKnown RBP11.36□□□□□ -0.59
TPM3-205ENST00000328159 ITPR2Q14571 2701 aa11.36□□□□□ -0.59
TPM3-205ENST00000328159 DNAJC9-AS1A6NH13 148 aa11.36□□□□□ -0.59
TPM3-205ENST00000328159 SOCS3O14543 225 aa11.36□□□□□ -0.59
TPM3-205ENST00000328159 SMIM6P0DI80 62 aa11.36□□□□□ -0.59
TPM3-205ENST00000328159 CRISP2P16562 243 aa11.36□□□□□ -0.59
TPM3-205ENST00000328159 GDF5OSQ5U4N7 250 aa11.36□□□□□ -0.59
TPM3-205ENST00000328159 NRN1Q9NPD7 142 aa11.36□□□□□ -0.59
TPM3-205ENST00000328159 GCN1Q92616 2671 aaKnown RBP11.35□□□□□ -0.59
TPM3-205ENST00000328159 GRIFINA4D1Z8 144 aa11.35□□□□□ -0.59
TPM3-205ENST00000328159 APCSP02743 223 aa11.35□□□□□ -0.59
TPM3-205ENST00000328159 FABP4P15090 132 aa11.35□□□□□ -0.59
TPM3-205ENST00000328159 CAMPP49913 170 aa11.35□□□□□ -0.59
TPM3-205ENST00000328159 FOXA3P55318 350 aaPredicted RBP11.35□□□□□ -0.59
TPM3-205ENST00000328159 HBBP68871 147 aa11.35□□□□□ -0.59
TPM3-205ENST00000328159 C20orf173Q96LM9 149 aa11.35□□□□□ -0.59
TPM3-205ENST00000328159 HIST1H2BLQ99880 126 aa11.35□□□□□ -0.59
TPM3-205ENST00000328159 AGPAT4-IT1Q9H0P7 198 aa11.35□□□□□ -0.59
TPM3-205ENST00000328159 TMEM189A5PLL7 270 aa11.34□□□□□ -0.59
TPM3-205ENST00000328159 ZNF80P51504 273 aaPredicted RBP11.34□□□□□ -0.59
TPM3-205ENST00000328159 RPL11P62913 178 aaKnown RBP11.34□□□□□ -0.59
TPM3-205ENST00000328159 KIAA1644Q3SXP7 199 aa11.34□□□□□ -0.59
TPM3-205ENST00000328159 C9orf47Q6ZRZ4 202 aa11.34□□□□□ -0.59
TPM3-205ENST00000328159 ZNF738Q8NE65 137 aa11.34□□□□□ -0.59
TPM3-205ENST00000328159 OR10D4PQ8NGN7 298 aa11.34□□□□□ -0.59
TPM3-205ENST00000328159 ZNF469Q96JG9 3925 aaPredicted RBP11.34□□□□□ -0.59
TPM3-205ENST00000328159 IGHV4OR15-8A0A075B7B6 117 aa11.33□□□□□ -0.59
TPM3-205ENST00000328159 A0A087WW49 117 aa11.33□□□□□ -0.59
TPM3-205ENST00000328159 A0A1B0GUS0 222 aa11.33□□□□□ -0.59
TPM3-205ENST00000328159 EDN2P20800 178 aa11.33□□□□□ -0.59
TPM3-205ENST00000328159 BMI1P35226 326 aa11.33□□□□□ -0.59
TPM3-205ENST00000328159 ZNF138P52744 262 aa11.33□□□□□ -0.59
TPM3-205ENST00000328159 TMEM78Q5T7P6 136 aa11.33□□□□□ -0.59
TPM3-205ENST00000328159 KLHDC1Q8N7A1 406 aa11.33□□□□□ -0.59
TPM3-205ENST00000328159 FAM181BA6NEQ2 426 aa11.33□□□□□ -0.6
TPM3-205ENST00000328159 AMBPP02760 352 aa11.33□□□□□ -0.6
TPM3-205ENST00000328159 SLAQ13239 276 aa11.33□□□□□ -0.6
TPM3-205ENST00000328159 REC114Q7Z4M0 266 aa11.33□□□□□ -0.6
TPM3-205ENST00000328159 TMEM256Q8N2U0 113 aa11.33□□□□□ -0.6
TPM3-205ENST00000328159 TMEM213A2RRL7 107 aa11.32□□□□□ -0.6
TPM3-205ENST00000328159 A8MWP6 167 aa11.32□□□□□ -0.6
TPM3-205ENST00000328159 Q0VG73 95 aa11.32□□□□□ -0.6
TPM3-205ENST00000328159 Q6AWC8 147 aa11.32□□□□□ -0.6
TPM3-205ENST00000328159 Q6ZSV7 163 aa11.32□□□□□ -0.6
TPM3-205ENST00000328159 TP53TG3Q9ULZ0 132 aa11.32□□□□□ -0.6
TPM3-205ENST00000328159 ACANP16112 2415 aa11.31□□□□□ -0.6
TPM3-205ENST00000328159 TMSB15BA0A087X1C1 80 aa11.31□□□□□ -0.6
TPM3-205ENST00000328159 FABP5P3A8MUU1 101 aa11.31□□□□□ -0.6
TPM3-205ENST00000328159 HAX1O00165 279 aa11.31□□□□□ -0.6
TPM3-205ENST00000328159 LGALS9O00182 355 aa11.31□□□□□ -0.6
TPM3-205ENST00000328159 OVOL1O14753 267 aa11.31□□□□□ -0.6
TPM3-205ENST00000328159 PACRGQ96M98 296 aaPredicted RBP11.31□□□□□ -0.6
TPM3-205ENST00000328159 SSBP4Q9BWG4 385 aaPredicted RBP11.31□□□□□ -0.6
TPM3-205ENST00000328159 ESM1Q9NQ30 184 aa11.31□□□□□ -0.6
TPM3-205ENST00000328159 PPP1R14DQ9NXH3 145 aa11.31□□□□□ -0.6
TPM3-205ENST00000328159 SELENOKQ9Y6D0 94 aa11.31□□□□□ -0.6
TPM3-205ENST00000328159 FASNP49327 2511 aaKnown RBP11.31□□□□□ -0.6
TPM3-205ENST00000328159 IGKV3-7A0A075B6H7 116 aa11.31□□□□□ -0.6
TPM3-205ENST00000328159 A0A1B0GUT8 65 aa11.31□□□□□ -0.6
TPM3-205ENST00000328159 SRIP30626 198 aa11.31□□□□□ -0.6
TPM3-205ENST00000328159 HOXD3P31249 432 aaPredicted RBP11.31□□□□□ -0.6
TPM3-205ENST00000328159 SYNJ2BPP57105 145 aa11.31□□□□□ -0.6
TPM3-205ENST00000328159 RPS20P60866 119 aaKnown RBP11.31□□□□□ -0.6
TPM3-205ENST00000328159 SRSF2Q01130 221 aaKnown RBP11.31□□□□□ -0.6
TPM3-205ENST00000328159 BAGE3Q86Y29 109 aa11.31□□□□□ -0.6
TPM3-205ENST00000328159 NUPR1O60356 82 aa11.3□□□□□ -0.6
TPM3-205ENST00000328159 RIGQ13278 110 aa11.3□□□□□ -0.6
TPM3-205ENST00000328159 OR10J3Q5JRS4 329 aa11.3□□□□□ -0.6
TPM3-205ENST00000328159 C18orf65Q6ZTR6 163 aa11.3□□□□□ -0.6
TPM3-205ENST00000328159 TMEM18Q96B42 140 aa11.3□□□□□ -0.6
TPM3-205ENST00000328159 MYO9AB2RTY4 2548 aa11.3□□□□□ -0.6
TPM3-205ENST00000328159 F2Z2F3 143 aa11.29□□□□□ -0.6
TPM3-205ENST00000328159 SERF1AO75920 110 aa11.29□□□□□ -0.6
TPM3-205ENST00000328159 ARMS2P0C7Q2 107 aa11.29□□□□□ -0.6
TPM3-205ENST00000328159 ZNF705DP0CH99 300 aaPredicted RBP11.29□□□□□ -0.6
TPM3-205ENST00000328159 ZNF705BP0CI00 300 aaPredicted RBP11.29□□□□□ -0.6
TPM3-205ENST00000328159 SRD5A1P18405 259 aa11.29□□□□□ -0.6
TPM3-205ENST00000328159 TCTEX1D4Q5JR98 221 aa11.29□□□□□ -0.6
TPM3-205ENST00000328159 SAMD13Q5VXD3 122 aa11.29□□□□□ -0.6
TPM3-205ENST00000328159 OR10J6PQ8NGY7 276 aa11.29□□□□□ -0.6
TPM3-205ENST00000328159 TPPP3Q9BW30 176 aa11.29□□□□□ -0.6
TPM3-205ENST00000328159 ORM1P02763 201 aa11.28□□□□□ -0.6
TPM3-205ENST00000328159 ID1P41134 155 aa11.28□□□□□ -0.6
TPM3-205ENST00000328159 LINC00310P59036 64 aa11.28□□□□□ -0.6
TPM3-205ENST00000328159 HIST1H1AQ02539 215 aaPredicted RBP11.28□□□□□ -0.6
TPM3-205ENST00000328159 SCGB2A2Q13296 93 aa11.28□□□□□ -0.6
TPM3-205ENST00000328159 BORCS7Q96B45 105 aa11.28□□□□□ -0.6
TPM3-205ENST00000328159 LINC00477Q96M19 166 aa11.28□□□□□ -0.6
TPM3-205ENST00000328159 LENEPQ9Y5L5 61 aa11.28□□□□□ -0.6
TPM3-205ENST00000328159 HECTD1Q9ULT8 2610 aa11.28□□□□□ -0.6
TPM3-205ENST00000328159 A0A1B0GW15 77 aa11.28□□□□□ -0.6
TPM3-205ENST00000328159 ESDP10768 282 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms