RNA–Protein interactions for RNA: ENST00000325307.11

HMGB3-201, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 3,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-201ENST00000325307 FAM3BP58499 235 aaPredicted RBP7.69□□□□□ -1.18
HMGB3-201ENST00000325307 C8orf86Q6ZUL3 223 aa7.69□□□□□ -1.18
HMGB3-201ENST00000325307 NAT8Q9UHE5 227 aa7.69□□□□□ -1.18
HMGB3-201ENST00000325307 H3BRN7 92 aa7.69□□□□□ -1.18
HMGB3-201ENST00000325307 TFPI2P48307 235 aa7.69□□□□□ -1.18
HMGB3-201ENST00000325307 OR8I2Q8N0Y5 310 aa7.69□□□□□ -1.18
HMGB3-201ENST00000325307 OR11H1Q8NG94 326 aa7.69□□□□□ -1.18
HMGB3-201ENST00000325307 WIPF2Q8TF74 440 aaPredicted RBP7.69□□□□□ -1.18
HMGB3-201ENST00000325307 TSSC4Q9Y5U2 329 aaPredicted RBP7.69□□□□□ -1.18
HMGB3-201ENST00000325307 A0A1B0GUS0 222 aa7.69□□□□□ -1.18
HMGB3-201ENST00000325307 ESDP10768 282 aa7.69□□□□□ -1.18
HMGB3-201ENST00000325307 HOXD3P31249 432 aaPredicted RBP7.69□□□□□ -1.18
HMGB3-201ENST00000325307 HERV-K104P63124 156 aa7.69□□□□□ -1.18
HMGB3-201ENST00000325307 FAM167A-AS1Q96KT0 104 aa7.69□□□□□ -1.18
HMGB3-201ENST00000325307 SYNJ2BPP57105 145 aa7.68□□□□□ -1.18
HMGB3-201ENST00000325307 FOXL1Q12952 345 aa7.68□□□□□ -1.18
HMGB3-201ENST00000325307 NSUN5P1Q3KNT7 163 aa7.68□□□□□ -1.18
HMGB3-201ENST00000325307 CST9LP1Q5W188 147 aa7.68□□□□□ -1.18
HMGB3-201ENST00000325307 OR1N2Q8NGR9 330 aa7.68□□□□□ -1.18
HMGB3-201ENST00000325307 BLNKQ8WV28 456 aa7.68□□□□□ -1.18
HMGB3-201ENST00000325307 ZNF705GA8MUZ8 300 aaPredicted RBP7.68□□□□□ -1.18
HMGB3-201ENST00000325307 LINC01619G3V211 115 aa7.68□□□□□ -1.18
HMGB3-201ENST00000325307 BPIFA4PQ86YQ2 179 aa7.68□□□□□ -1.18
HMGB3-201ENST00000325307 TMEM190Q8WZ59 177 aa7.68□□□□□ -1.18
HMGB3-201ENST00000325307 ZNF414Q96IQ9 312 aa7.68□□□□□ -1.18
HMGB3-201ENST00000325307 TMEM167BQ9NRX6 74 aa7.68□□□□□ -1.18
HMGB3-201ENST00000325307 H3BTX0 84 aa7.67□□□□□ -1.18
HMGB3-201ENST00000325307 ADIRFQ15847 76 aa7.67□□□□□ -1.18
HMGB3-201ENST00000325307 TM4SF20Q53R12 229 aa7.67□□□□□ -1.18
HMGB3-201ENST00000325307 GPHB5Q86YW7 130 aa7.67□□□□□ -1.18
HMGB3-201ENST00000325307 DAZ1Q9NQZ3 744 aaKnown RBP7.67□□□□□ -1.18
HMGB3-201ENST00000325307 SCO2A0A1W2PP80 73 aa7.67□□□□□ -1.18
HMGB3-201ENST00000325307 SLURP1P55000 103 aa7.67□□□□□ -1.18
HMGB3-201ENST00000325307 OR4F17Q8NGA8 305 aa7.67□□□□□ -1.18
HMGB3-201ENST00000325307 SAP30O75446 220 aa7.67□□□□□ -1.18
HMGB3-201ENST00000325307 SAMD13Q5VXD3 122 aa7.67□□□□□ -1.18
HMGB3-201ENST00000325307 UFC1Q9Y3C8 167 aa7.67□□□□□ -1.18
HMGB3-201ENST00000325307 NDUFB4O95168 129 aa7.66□□□□□ -1.18
HMGB3-201ENST00000325307 APOHP02749 345 aaPredicted RBP7.66□□□□□ -1.18
HMGB3-201ENST00000325307 RIPPLY3P57055 190 aa7.66□□□□□ -1.18
HMGB3-201ENST00000325307 PDE6DO43924 150 aa7.66□□□□□ -1.18
HMGB3-201ENST00000325307 RPL7P18124 248 aaKnown RBP7.66□□□□□ -1.18
HMGB3-201ENST00000325307 CRYBB3P26998 211 aa7.66□□□□□ -1.18
HMGB3-201ENST00000325307 TSPAN13O95857 204 aa7.66□□□□□ -1.18
HMGB3-201ENST00000325307 GP9P14770 177 aa7.66□□□□□ -1.18
HMGB3-201ENST00000325307 FXYD5Q96DB9 178 aa7.66□□□□□ -1.18
HMGB3-201ENST00000325307 GRAMD2BQ96HH9 432 aa7.66□□□□□ -1.18
HMGB3-201ENST00000325307 SELENOKQ9Y6D0 94 aa7.66□□□□□ -1.18
HMGB3-201ENST00000325307 ATRQ13535 2644 aa7.65□□□□□ -1.18
HMGB3-201ENST00000325307 CCL24O00175 119 aa7.65□□□□□ -1.18
HMGB3-201ENST00000325307 BUB3O43684 328 aa7.65□□□□□ -1.18
HMGB3-201ENST00000325307 RANP62826 216 aaKnown RBP7.65□□□□□ -1.18
HMGB3-201ENST00000325307 RPL11P62913 178 aaKnown RBP7.65□□□□□ -1.18
HMGB3-201ENST00000325307 RAX2Q96IS3 184 aa7.65□□□□□ -1.18
HMGB3-201ENST00000325307 CITED1Q99966 193 aa7.65□□□□□ -1.18
HMGB3-201ENST00000325307 A0A1W2PS18 150 aa7.65□□□□□ -1.18
HMGB3-201ENST00000325307 ZNF785A8K8V0 405 aa7.65□□□□□ -1.18
HMGB3-201ENST00000325307 HIST1H1EP10412 219 aaKnown RBP7.65□□□□□ -1.18
HMGB3-201ENST00000325307 GLMPQ8WWB7 406 aa7.65□□□□□ -1.18
HMGB3-201ENST00000325307 A0A1B0GW15 77 aa7.65□□□□□ -1.19
HMGB3-201ENST00000325307 CTRLP40313 264 aa7.65□□□□□ -1.19
HMGB3-201ENST00000325307 ID1P41134 155 aa7.65□□□□□ -1.19
HMGB3-201ENST00000325307 GALR1P47211 349 aa7.65□□□□□ -1.19
HMGB3-201ENST00000325307 RHPN1-AS1Q9BWJ2 59 aa7.65□□□□□ -1.19
HMGB3-201ENST00000325307 TMEM14CQ9P0S9 112 aa7.65□□□□□ -1.19
HMGB3-201ENST00000325307 IGHV7-4-1A0A0J9YVY3 117 aa7.64□□□□□ -1.19
HMGB3-201ENST00000325307 K7ERU9 68 aa7.64□□□□□ -1.19
HMGB3-201ENST00000325307 KRTAP10-3P60369 221 aa7.64□□□□□ -1.19
HMGB3-201ENST00000325307 C11orf52Q96A22 123 aa7.64□□□□□ -1.19
HMGB3-201ENST00000325307 TRBV7-9A0A0J9YWB2 115 aa7.64□□□□□ -1.19
HMGB3-201ENST00000325307 GGTLC3B5MD39 225 aa7.64□□□□□ -1.19
HMGB3-201ENST00000325307 K7EN84 100 aa7.64□□□□□ -1.19
HMGB3-201ENST00000325307 KLF5Q13887 457 aaPredicted RBP7.64□□□□□ -1.19
HMGB3-201ENST00000325307 WNK1Q9H4A3 2382 aa7.64□□□□□ -1.19
HMGB3-201ENST00000325307 IGKV3-7A0A075B6H7 116 aa7.64□□□□□ -1.19
HMGB3-201ENST00000325307 K7EMT4 169 aa7.64□□□□□ -1.19
HMGB3-201ENST00000325307 EDN2P20800 178 aa7.64□□□□□ -1.19
HMGB3-201ENST00000325307 SUMO1P63165 101 aaKnown RBP7.64□□□□□ -1.19
HMGB3-201ENST00000325307 KRTAP24-1Q3LI83 254 aa7.64□□□□□ -1.19
HMGB3-201ENST00000325307 OR4C5Q8NGB2 326 aa7.64□□□□□ -1.19
HMGB3-201ENST00000325307 DLX4Q92988 240 aaPredicted RBP7.64□□□□□ -1.19
HMGB3-201ENST00000325307 ZNF586Q9NXT0 402 aa7.64□□□□□ -1.19
HMGB3-201ENST00000325307 TMEM213A2RRL7 107 aa7.63□□□□□ -1.19
HMGB3-201ENST00000325307 LGALS9O00182 355 aa7.63□□□□□ -1.19
HMGB3-201ENST00000325307 CNN1P51911 297 aaKnown RBP7.63□□□□□ -1.19
HMGB3-201ENST00000325307 SIGLEC15Q6ZMC9 328 aa7.63□□□□□ -1.19
HMGB3-201ENST00000325307 PRIMA1Q86XR5 153 aa7.63□□□□□ -1.19
HMGB3-201ENST00000325307 NDUFA11Q86Y39 141 aa7.63□□□□□ -1.19
HMGB3-201ENST00000325307 C17orf77Q96MU5 243 aa7.63□□□□□ -1.19
HMGB3-201ENST00000325307 GPR82Q96P67 336 aa7.63□□□□□ -1.19
HMGB3-201ENST00000325307 PEMTQ9UBM1 199 aa7.63□□□□□ -1.19
HMGB3-201ENST00000325307 COX11Q9Y6N1 276 aa7.63□□□□□ -1.19
HMGB3-201ENST00000325307 U3KQE9 123 aa7.63□□□□□ -1.19
HMGB3-201ENST00000325307 ZNF705AQ6ZN79 300 aaPredicted RBP7.63□□□□□ -1.19
HMGB3-201ENST00000325307 ANAPC16Q96DE5 110 aa7.63□□□□□ -1.19
HMGB3-201ENST00000325307 CHEK1O14757 476 aa7.63□□□□□ -1.19
HMGB3-201ENST00000325307 IGLC2P0DOY2 106 aa7.63□□□□□ -1.19
HMGB3-201ENST00000325307 LINC00310P59036 64 aa7.63□□□□□ -1.19
HMGB3-201ENST00000325307 Q8N976 141 aa7.63□□□□□ -1.19
HMGB3-201ENST00000325307 TXNDC17Q9BRA2 123 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms