RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 IGLV2-8P01709 118 aa11.33□□□□□ -0.6
PRPF3-201ENST00000324862 OR5I1Q13606 314 aa11.33□□□□□ -0.6
PRPF3-201ENST00000324862 OR4B1Q8NGF8 309 aa11.33□□□□□ -0.6
PRPF3-201ENST00000324862 OCC1Q8TAD7 63 aa11.33□□□□□ -0.6
PRPF3-201ENST00000324862 MRPL53Q96EL3 112 aaKnown RBP11.33□□□□□ -0.6
PRPF3-201ENST00000324862 MCRIP2Q9BUT9 160 aaKnown RBP11.33□□□□□ -0.6
PRPF3-201ENST00000324862 SEC11CQ9BY50 192 aa11.33□□□□□ -0.6
PRPF3-201ENST00000324862 C19orf73Q9NVV2 129 aa11.33□□□□□ -0.6
PRPF3-201ENST00000324862 NBEAL1Q6ZS30 2694 aa11.32□□□□□ -0.6
PRPF3-201ENST00000324862 DNAH3Q8TD57 4116 aa11.32□□□□□ -0.6
PRPF3-201ENST00000324862 TRAV2A0A0B4J234 112 aa11.32□□□□□ -0.6
PRPF3-201ENST00000324862 K7EN84 100 aa11.32□□□□□ -0.6
PRPF3-201ENST00000324862 GNG4P50150 75 aa11.32□□□□□ -0.6
PRPF3-201ENST00000324862 Q6ZQT7 251 aa11.32□□□□□ -0.6
PRPF3-201ENST00000324862 BAGE2Q86Y30 109 aa11.32□□□□□ -0.6
PRPF3-201ENST00000324862 TMEM75Q8N9X5 138 aa11.32□□□□□ -0.6
PRPF3-201ENST00000324862 A0A0J9YX75 114 aa11.31□□□□□ -0.6
PRPF3-201ENST00000324862 CT45A10P0DMU9 189 aa11.31□□□□□ -0.6
PRPF3-201ENST00000324862 KRTAP10-11P60412 298 aa11.31□□□□□ -0.6
PRPF3-201ENST00000324862 PRR31Q5SQ13 230 aa11.31□□□□□ -0.6
PRPF3-201ENST00000324862 OR2K2Q8NGT1 345 aa11.31□□□□□ -0.6
PRPF3-201ENST00000324862 TCEAL7Q9BRU2 100 aa11.31□□□□□ -0.6
PRPF3-201ENST00000324862 C10orf91Q5T1B1 145 aa11.31□□□□□ -0.6
PRPF3-201ENST00000324862 SAMD13Q5VXD3 122 aa11.31□□□□□ -0.6
PRPF3-201ENST00000324862 OR10J6PQ8NGY7 276 aa11.31□□□□□ -0.6
PRPF3-201ENST00000324862 FMC1Q96HJ9 113 aa11.31□□□□□ -0.6
PRPF3-201ENST00000324862 PRR25Q96S07 402 aa11.31□□□□□ -0.6
PRPF3-201ENST00000324862 SAV1Q9H4B6 383 aaPredicted RBP11.31□□□□□ -0.6
PRPF3-201ENST00000324862 CLEC5AQ9NY25 188 aa11.31□□□□□ -0.6
PRPF3-201ENST00000324862 OR11H12B2RN74 326 aa11.3□□□□□ -0.6
PRPF3-201ENST00000324862 KRBOX1C9JBD0 128 aa11.3□□□□□ -0.6
PRPF3-201ENST00000324862 K7EQM0 130 aa11.3□□□□□ -0.6
PRPF3-201ENST00000324862 LTAP01374 205 aa11.3□□□□□ -0.6
PRPF3-201ENST00000324862 FXYD7P58549 80 aa11.3□□□□□ -0.6
PRPF3-201ENST00000324862 LINC00322Q6ZN03 302 aaPredicted RBP11.3□□□□□ -0.6
PRPF3-201ENST00000324862 NIPSNAP3BQ9BS92 247 aa11.3□□□□□ -0.6
PRPF3-201ENST00000324862 RBMY1BA6NDE4 496 aaKnown RBP11.3□□□□□ -0.6
PRPF3-201ENST00000324862 RBMY1EA6NEQ0 496 aaKnown RBP11.3□□□□□ -0.6
PRPF3-201ENST00000324862 RBMY1DP0C7P1 496 aaKnown RBP11.3□□□□□ -0.6
PRPF3-201ENST00000324862 MGST1P10620 155 aaKnown RBP11.3□□□□□ -0.6
PRPF3-201ENST00000324862 RPL23P62829 140 aaKnown RBP11.3□□□□□ -0.6
PRPF3-201ENST00000324862 ADIRFQ15847 76 aa11.3□□□□□ -0.6
PRPF3-201ENST00000324862 TMEM241Q24JQ0 296 aa11.3□□□□□ -0.6
PRPF3-201ENST00000324862 TMEM78Q5T7P6 136 aa11.3□□□□□ -0.6
PRPF3-201ENST00000324862 PRR27Q6MZM9 219 aa11.3□□□□□ -0.6
PRPF3-201ENST00000324862 C9orf47Q6ZRZ4 202 aa11.3□□□□□ -0.6
PRPF3-201ENST00000324862 LINC01551Q86U37 167 aa11.3□□□□□ -0.6
PRPF3-201ENST00000324862 DEFB125Q8N687 156 aa11.3□□□□□ -0.6
PRPF3-201ENST00000324862 SDF2L1Q9HCN8 221 aa11.3□□□□□ -0.6
PRPF3-201ENST00000324862 NPIPB6E9PJ23 425 aa11.29□□□□□ -0.6
PRPF3-201ENST00000324862 PRR9Q5T870 116 aa11.29□□□□□ -0.6
PRPF3-201ENST00000324862 ATRAIDQ6UW56 229 aa11.29□□□□□ -0.6
PRPF3-201ENST00000324862 ZNF492Q9P255 531 aa11.29□□□□□ -0.6
PRPF3-201ENST00000324862 CARHSP1Q9Y2V2 147 aaKnown RBP11.29□□□□□ -0.6
PRPF3-201ENST00000324862 RBAKDNA6NC62 111 aa11.29□□□□□ -0.6
PRPF3-201ENST00000324862 WIPF1O43516 503 aa11.29□□□□□ -0.6
PRPF3-201ENST00000324862 TAS2R60P59551 318 aa11.29□□□□□ -0.6
PRPF3-201ENST00000324862 EBLN2Q6P2I7 272 aa11.29□□□□□ -0.6
PRPF3-201ENST00000324862 FOXI2Q6ZQN5 318 aa11.29□□□□□ -0.6
PRPF3-201ENST00000324862 ZC2HC1AQ96GY0 325 aa11.29□□□□□ -0.6
PRPF3-201ENST00000324862 MLST8Q9BVC4 326 aa11.29□□□□□ -0.6
PRPF3-201ENST00000324862 NAT8Q9UHE5 227 aa11.29□□□□□ -0.6
PRPF3-201ENST00000324862 H3BMM0 161 aa11.28□□□□□ -0.6
PRPF3-201ENST00000324862 M0R2Z0 102 aa11.28□□□□□ -0.6
PRPF3-201ENST00000324862 NDUFS6O75380 124 aaKnown RBP11.28□□□□□ -0.6
PRPF3-201ENST00000324862 ZNF80P51504 273 aaPredicted RBP11.28□□□□□ -0.6
PRPF3-201ENST00000324862 ZNF138P52744 262 aa11.28□□□□□ -0.6
PRPF3-201ENST00000324862 C9JCJ5 164 aa11.28□□□□□ -0.6
PRPF3-201ENST00000324862 ARL6IP6Q8N6S5 226 aa11.28□□□□□ -0.6
PRPF3-201ENST00000324862 TRAV12-2A0A075B6T6 113 aa11.27□□□□□ -0.6
PRPF3-201ENST00000324862 SERTM2A0A1B0GWG4 89 aa11.27□□□□□ -0.6
PRPF3-201ENST00000324862 M0R036 132 aa11.27□□□□□ -0.6
PRPF3-201ENST00000324862 HLA-DRB4P13762 266 aa11.27□□□□□ -0.6
PRPF3-201ENST00000324862 CRIP1P50238 77 aa11.27□□□□□ -0.6
PRPF3-201ENST00000324862 HLA-DRB4X5D2U9 266 aa11.27□□□□□ -0.6
PRPF3-201ENST00000324862 PRB2P02812 416 aaPredicted RBP11.27□□□□□ -0.61
PRPF3-201ENST00000324862 SPINK13Q1W4C9 94 aa11.27□□□□□ -0.61
PRPF3-201ENST00000324862 FAM74A3Q4VXF1 159 aa11.27□□□□□ -0.61
PRPF3-201ENST00000324862 Q8N1Y9 231 aa11.27□□□□□ -0.61
PRPF3-201ENST00000324862 RNASE7Q9H1E1 156 aaKnown RBP11.27□□□□□ -0.61
PRPF3-201ENST00000324862 AMTNQ6UX39 209 aa11.26□□□□□ -0.61
PRPF3-201ENST00000324862 GTSCR1Q86UQ5 136 aa11.26□□□□□ -0.61
PRPF3-201ENST00000324862 TMEM183AQ8IXX5 376 aa11.26□□□□□ -0.61
PRPF3-201ENST00000324862 LINC00477Q96M19 166 aa11.26□□□□□ -0.61
PRPF3-201ENST00000324862 RPL35AP18077 110 aaKnown RBP11.26□□□□□ -0.61
PRPF3-201ENST00000324862 ZFAND2AQ8N6M9 145 aa11.26□□□□□ -0.61
PRPF3-201ENST00000324862 BTN1A1Q13410 526 aa11.25□□□□□ -0.61
PRPF3-201ENST00000324862 FAM19A4Q96LR4 140 aa11.25□□□□□ -0.61
PRPF3-201ENST00000324862 SCO1O75880 301 aa11.25□□□□□ -0.61
PRPF3-201ENST00000324862 GCGP01275 180 aa11.25□□□□□ -0.61
PRPF3-201ENST00000324862 ISOC2Q96AB3 205 aa11.25□□□□□ -0.61
PRPF3-201ENST00000324862 ZFP30Q9Y2G7 519 aa11.25□□□□□ -0.61
PRPF3-201ENST00000324862 TRBV6-1A0A0K0K1D8 114 aa11.24□□□□□ -0.61
PRPF3-201ENST00000324862 S100A9P06702 114 aaKnown RBP11.24□□□□□ -0.61
PRPF3-201ENST00000324862 SAMD5Q5TGI4 173 aa11.24□□□□□ -0.61
PRPF3-201ENST00000324862 STHQ8IWL8 128 aa11.24□□□□□ -0.61
PRPF3-201ENST00000324862 CLRN3Q8NCR9 226 aa11.24□□□□□ -0.61
PRPF3-201ENST00000324862 NBEAL2Q6ZNJ1 2754 aa11.24□□□□□ -0.61
PRPF3-201ENST00000324862 PPP1R14DQ9NXH3 145 aa11.24□□□□□ -0.61
PRPF3-201ENST00000324862 CA1P00915 261 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 187.4 ms