RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 ZNF562Q6V9R5 426 aa10.08□□□□□ -0.8
DNMT3A-202ENST00000321117 PCP2Q8IVA1 136 aa10.08□□□□□ -0.8
DNMT3A-202ENST00000321117 KIR2DL4Q99706 377 aa10.08□□□□□ -0.8
DNMT3A-202ENST00000321117 A0A1W2PPM0 123 aa10.07□□□□□ -0.8
DNMT3A-202ENST00000321117 I3L2K1 104 aa10.07□□□□□ -0.8
DNMT3A-202ENST00000321117 LY6HO94772 140 aa10.07□□□□□ -0.8
DNMT3A-202ENST00000321117 GAGE13Q4V321 117 aa10.07□□□□□ -0.8
DNMT3A-202ENST00000321117 CHTOPQ9Y3Y2 248 aaKnown RBP10.07□□□□□ -0.8
DNMT3A-202ENST00000321117 TRAV40A0A0B4J280 105 aa10.07□□□□□ -0.8
DNMT3A-202ENST00000321117 H7C2G1 150 aa10.07□□□□□ -0.8
DNMT3A-202ENST00000321117 SIVA1O15304 175 aa10.07□□□□□ -0.8
DNMT3A-202ENST00000321117 PPP1R17O96001 155 aa10.07□□□□□ -0.8
DNMT3A-202ENST00000321117 TRGV3P03979 118 aa10.07□□□□□ -0.8
DNMT3A-202ENST00000321117 TMEM170BQ5T4T1 132 aa10.07□□□□□ -0.8
DNMT3A-202ENST00000321117 VMO1Q7Z5L0 202 aa10.07□□□□□ -0.8
DNMT3A-202ENST00000321117 ZNF418Q8TF45 676 aaPredicted RBP10.07□□□□□ -0.8
DNMT3A-202ENST00000321117 DOPEY2Q9Y3R5 2298 aa10.07□□□□□ -0.8
DNMT3A-202ENST00000321117 PSMB11A5LHX3 300 aa10.07□□□□□ -0.8
DNMT3A-202ENST00000321117 TMEM8BA6NDV4 472 aa10.07□□□□□ -0.8
DNMT3A-202ENST00000321117 PRSS33Q8NF86 280 aa10.07□□□□□ -0.8
DNMT3A-202ENST00000321117 GTSF1LQ9H1H1 148 aa10.07□□□□□ -0.8
DNMT3A-202ENST00000321117 ADAMTSL5Q6ZMM2 481 aa10.06□□□□□ -0.8
DNMT3A-202ENST00000321117 MTURNQ8N3F0 131 aa10.06□□□□□ -0.8
DNMT3A-202ENST00000321117 K7EIM0 57 aa10.06□□□□□ -0.8
DNMT3A-202ENST00000321117 PLNP26678 52 aa10.06□□□□□ -0.8
DNMT3A-202ENST00000321117 ID1P41134 155 aa10.06□□□□□ -0.8
DNMT3A-202ENST00000321117 TRANK1O15050 2925 aa10.06□□□□□ -0.8
DNMT3A-202ENST00000321117 ADAMTS20P59510 1910 aa10.06□□□□□ -0.8
DNMT3A-202ENST00000321117 HOXA3O43365 443 aaPredicted RBP10.06□□□□□ -0.8
DNMT3A-202ENST00000321117 EGR2P11161 476 aaPredicted RBP10.06□□□□□ -0.8
DNMT3A-202ENST00000321117 LGALS3P17931 250 aaKnown RBP10.06□□□□□ -0.8
DNMT3A-202ENST00000321117 VGLL1Q99990 258 aa10.06□□□□□ -0.8
DNMT3A-202ENST00000321117 DSCAMO60469 2012 aa10.06□□□□□ -0.8
DNMT3A-202ENST00000321117 SAP30O75446 220 aa10.05□□□□□ -0.8
DNMT3A-202ENST00000321117 RBX1P62877 108 aa10.05□□□□□ -0.8
DNMT3A-202ENST00000321117 FAM74A4Q5TZK3 123 aa10.05□□□□□ -0.8
DNMT3A-202ENST00000321117 CYSLTR1Q9Y271 337 aa10.05□□□□□ -0.8
DNMT3A-202ENST00000321117 ZNF815PA8K554 130 aa10.05□□□□□ -0.8
DNMT3A-202ENST00000321117 CRXO43186 299 aaPredicted RBP10.05□□□□□ -0.8
DNMT3A-202ENST00000321117 FAM159AQ6UWV7 190 aa10.05□□□□□ -0.8
DNMT3A-202ENST00000321117 UNC80Q8N2C7 3258 aa10.05□□□□□ -0.8
DNMT3A-202ENST00000321117 MYCNOSP40205 109 aa10.05□□□□□ -0.8
DNMT3A-202ENST00000321117 ZFHX2Q9C0A1 2572 aaPredicted RBP10.05□□□□□ -0.8
DNMT3A-202ENST00000321117 PRTN3P24158 256 aa10.04□□□□□ -0.8
DNMT3A-202ENST00000321117 TET2Q6N021 2002 aaPredicted RBP10.04□□□□□ -0.8
DNMT3A-202ENST00000321117 TRAV21A0A0B4J279 112 aa10.04□□□□□ -0.8
DNMT3A-202ENST00000321117 OOSP1A8MZH6 123 aa10.04□□□□□ -0.8
DNMT3A-202ENST00000321117 TEX22C9J3V5 150 aa10.04□□□□□ -0.8
DNMT3A-202ENST00000321117 M0R1W7 72 aa10.04□□□□□ -0.8
DNMT3A-202ENST00000321117 RNF182Q8N6D2 247 aa10.04□□□□□ -0.8
DNMT3A-202ENST00000321117 Q8N8P6 123 aa10.04□□□□□ -0.8
DNMT3A-202ENST00000321117 H7C1H1 209 aa10.04□□□□□ -0.8
DNMT3A-202ENST00000321117 TNRC6BQ9UPQ9 1833 aaKnown RBP10.04□□□□□ -0.8
DNMT3A-202ENST00000321117 IGHV3OR16-10A0A075B7F0 116 aa10.04□□□□□ -0.8
DNMT3A-202ENST00000321117 VWC2LB2RUY7 222 aa10.04□□□□□ -0.8
DNMT3A-202ENST00000321117 SPATA12Q7Z6I5 190 aa10.04□□□□□ -0.8
DNMT3A-202ENST00000321117 JMJD8Q96S16 334 aa10.04□□□□□ -0.8
DNMT3A-202ENST00000321117 HTN1P15515 57 aa10.03□□□□□ -0.8
DNMT3A-202ENST00000321117 RNASE4P34096 147 aaKnown RBP10.03□□□□□ -0.8
DNMT3A-202ENST00000321117 NPIPB6E9PJ23 425 aa10.03□□□□□ -0.8
DNMT3A-202ENST00000321117 HLA-DMBP28068 263 aa10.03□□□□□ -0.8
DNMT3A-202ENST00000321117 IL17RELQ6ZVW7 336 aa10.03□□□□□ -0.8
DNMT3A-202ENST00000321117 KHDC1LQ5JSQ8 128 aa10.03□□□□□ -0.8
DNMT3A-202ENST00000321117 MINOS1Q5TGZ0 78 aa10.03□□□□□ -0.8
DNMT3A-202ENST00000321117 GLMPQ8WWB7 406 aa10.03□□□□□ -0.8
DNMT3A-202ENST00000321117 MRPL35Q9NZE8 188 aaKnown RBP10.03□□□□□ -0.8
DNMT3A-202ENST00000321117 MINOS1-NBL1R4GNA1 71 aa10.03□□□□□ -0.8
DNMT3A-202ENST00000321117 CEACAM4O75871 244 aa10.02□□□□□ -0.8
DNMT3A-202ENST00000321117 CD300EQ496F6 205 aaPredicted RBP10.02□□□□□ -0.8
DNMT3A-202ENST00000321117 DTX2Q86UW9 622 aa10.02□□□□□ -0.8
DNMT3A-202ENST00000321117 BOD1L2Q8IYS8 172 aa10.02□□□□□ -0.8
DNMT3A-202ENST00000321117 K7ERJ3 54 aa10.02□□□□□ -0.81
DNMT3A-202ENST00000321117 IGLV1-47P01700 117 aa10.02□□□□□ -0.81
DNMT3A-202ENST00000321117 THBDP07204 575 aa10.02□□□□□ -0.81
DNMT3A-202ENST00000321117 LY6EQ16553 131 aa10.02□□□□□ -0.81
DNMT3A-202ENST00000321117 TRBV6-1A0A0K0K1D8 114 aa10.02□□□□□ -0.81
DNMT3A-202ENST00000321117 LOXL1Q08397 574 aaPredicted RBP10.02□□□□□ -0.81
DNMT3A-202ENST00000321117 PAPPA-AS1Q5QFB9 102 aa10.02□□□□□ -0.81
DNMT3A-202ENST00000321117 SYT8Q8NBV8 401 aa10.02□□□□□ -0.81
DNMT3A-202ENST00000321117 TGFAP01135 160 aa10.02□□□□□ -0.81
DNMT3A-202ENST00000321117 PRSS2P07478 247 aa10.02□□□□□ -0.81
DNMT3A-202ENST00000321117 NDPQ00604 133 aa10.02□□□□□ -0.81
DNMT3A-202ENST00000321117 ZNF56Q15929 161 aa10.02□□□□□ -0.81
DNMT3A-202ENST00000321117 CSTL1Q9H114 145 aa10.02□□□□□ -0.81
DNMT3A-202ENST00000321117 PAX8Q06710 450 aa10.01□□□□□ -0.81
DNMT3A-202ENST00000321117 ETDBQ3ZM63 59 aa10.01□□□□□ -0.81
DNMT3A-202ENST00000321117 FAM106AQ4KMX7 169 aa10.01□□□□□ -0.81
DNMT3A-202ENST00000321117 MSRB1Q9NZV6 116 aa10.01□□□□□ -0.81
DNMT3A-202ENST00000321117 C22orf34Q6ZV56 151 aa10.01□□□□□ -0.81
DNMT3A-202ENST00000321117 LINC00527Q9UJ94 153 aa10.01□□□□□ -0.81
DNMT3A-202ENST00000321117 OTOGLQ3ZCN5 2332 aa10.01□□□□□ -0.81
DNMT3A-202ENST00000321117 NOTCH3Q9UM47 2321 aa10.01□□□□□ -0.81
DNMT3A-202ENST00000321117 IGHV3-11P01762 117 aa10□□□□□ -0.81
DNMT3A-202ENST00000321117 DGAT2L7PQ6IED9 249 aa10□□□□□ -0.81
DNMT3A-202ENST00000321117 PIP4P1Q86T03 277 aa10□□□□□ -0.81
DNMT3A-202ENST00000321117 C14orf178Q8N769 122 aaPredicted RBP10□□□□□ -0.81
DNMT3A-202ENST00000321117 DPH3P1Q9H4G8 78 aa10□□□□□ -0.81
DNMT3A-202ENST00000321117 TRAV26-2A0A0B4J265 109 aa10□□□□□ -0.81
DNMT3A-202ENST00000321117 GATA1P15976 413 aaPredicted RBP10□□□□□ -0.81
DNMT3A-202ENST00000321117 IGFBPL1Q8WX77 278 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms