RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 ODF3Q96PU9 254 aa11.92□□□□□ -0.5
LRRC42-201ENST00000319223 TMPRSS5Q9H3S3 457 aa11.92□□□□□ -0.5
LRRC42-201ENST00000319223 OTORQ9NRC9 128 aa11.92□□□□□ -0.5
LRRC42-201ENST00000319223 CXorf65A6NEN9 183 aa11.91□□□□□ -0.5
LRRC42-201ENST00000319223 DIRC3C9JPN6 131 aa11.91□□□□□ -0.5
LRRC42-201ENST00000319223 CXorf1O96002 111 aa11.91□□□□□ -0.5
LRRC42-201ENST00000319223 EMP1P54849 157 aa11.91□□□□□ -0.5
LRRC42-201ENST00000319223 HBE1P02100 147 aa11.91□□□□□ -0.5
LRRC42-201ENST00000319223 SEC11BP0C7V7 166 aa11.91□□□□□ -0.5
LRRC42-201ENST00000319223 AZU1P20160 251 aa11.91□□□□□ -0.5
LRRC42-201ENST00000319223 TSPOP30536 169 aa11.91□□□□□ -0.5
LRRC42-201ENST00000319223 CSN1S1P47710 185 aa11.91□□□□□ -0.5
LRRC42-201ENST00000319223 GNG5P63218 68 aa11.91□□□□□ -0.5
LRRC42-201ENST00000319223 RRN3P1Q2M238 152 aa11.91□□□□□ -0.5
LRRC42-201ENST00000319223 Q8TAT8 98 aa11.91□□□□□ -0.5
LRRC42-201ENST00000319223 LINC01587Q99440 93 aa11.91□□□□□ -0.5
LRRC42-201ENST00000319223 RPH3ALQ9UNE2 315 aa11.91□□□□□ -0.5
LRRC42-201ENST00000319223 LOC102723971A0A1B0GUV8 181 aa11.9□□□□□ -0.5
LRRC42-201ENST00000319223 LEPP41159 167 aa11.9□□□□□ -0.5
LRRC42-201ENST00000319223 ZNF767PQ75MW2 155 aa11.9□□□□□ -0.5
LRRC42-201ENST00000319223 IQCF2Q8IXL9 164 aa11.9□□□□□ -0.5
LRRC42-201ENST00000319223 ZNF492Q9P255 531 aa11.9□□□□□ -0.5
LRRC42-201ENST00000319223 TRAV12-3A0A0B4J271 114 aa11.89□□□□□ -0.51
LRRC42-201ENST00000319223 TMEM78Q5T7P6 136 aa11.89□□□□□ -0.51
LRRC42-201ENST00000319223 PRR9Q5T870 116 aa11.89□□□□□ -0.51
LRRC42-201ENST00000319223 RXFP4Q8TDU9 374 aa11.89□□□□□ -0.51
LRRC42-201ENST00000319223 TMED6Q8WW62 240 aa11.89□□□□□ -0.51
LRRC42-201ENST00000319223 TMEM167BQ9NRX6 74 aa11.89□□□□□ -0.51
LRRC42-201ENST00000319223 RBAKDNA6NC62 111 aa11.89□□□□□ -0.51
LRRC42-201ENST00000319223 KLLNB2CW77 178 aa11.89□□□□□ -0.51
LRRC42-201ENST00000319223 HTN1P15515 57 aa11.89□□□□□ -0.51
LRRC42-201ENST00000319223 BTN1A1Q13410 526 aa11.89□□□□□ -0.51
LRRC42-201ENST00000319223 Q6ZQT7 251 aa11.89□□□□□ -0.51
LRRC42-201ENST00000319223 ZFAND2AQ8N6M9 145 aa11.89□□□□□ -0.51
LRRC42-201ENST00000319223 STOML3Q8TAV4 291 aa11.89□□□□□ -0.51
LRRC42-201ENST00000319223 CMTM2Q8TAZ6 248 aa11.89□□□□□ -0.51
LRRC42-201ENST00000319223 PHLDA1Q8WV24 401 aaPredicted RBP11.89□□□□□ -0.51
LRRC42-201ENST00000319223 TENM2Q9NT68 2774 aa11.88□□□□□ -0.51
LRRC42-201ENST00000319223 MAP1LC3B2A6NCE7 125 aa11.88□□□□□ -0.51
LRRC42-201ENST00000319223 GGTLC3B5MD39 225 aa11.88□□□□□ -0.51
LRRC42-201ENST00000319223 TPT1P13693 172 aaKnown RBP11.88□□□□□ -0.51
LRRC42-201ENST00000319223 CRISP2P16562 243 aa11.88□□□□□ -0.51
LRRC42-201ENST00000319223 ZNF138P52744 262 aa11.88□□□□□ -0.51
LRRC42-201ENST00000319223 FAM74A1Q5RGS3 127 aa11.88□□□□□ -0.51
LRRC42-201ENST00000319223 GOLT1AQ6ZVE7 132 aa11.88□□□□□ -0.51
LRRC42-201ENST00000319223 TMEM256Q8N2U0 113 aa11.88□□□□□ -0.51
LRRC42-201ENST00000319223 MAP1LC3BQ9GZQ8 125 aa11.88□□□□□ -0.51
LRRC42-201ENST00000319223 YTHDF2Q9Y5A9 579 aaKnown RBP11.88□□□□□ -0.51
LRRC42-201ENST00000319223 PLAC8L1A1L4L8 177 aa11.87□□□□□ -0.51
LRRC42-201ENST00000319223 SLC25A5P05141 298 aaKnown RBP11.87□□□□□ -0.51
LRRC42-201ENST00000319223 SUMO1P63165 101 aaKnown RBP11.87□□□□□ -0.51
LRRC42-201ENST00000319223 C12orf74Q32Q52 190 aa11.87□□□□□ -0.51
LRRC42-201ENST00000319223 C9orf62Q8N4C0 152 aa11.87□□□□□ -0.51
LRRC42-201ENST00000319223 FAM213BQ8TBF2 198 aa11.87□□□□□ -0.51
LRRC42-201ENST00000319223 TRAV8-1A0A0A6YYK1 113 aa11.86□□□□□ -0.51
LRRC42-201ENST00000319223 C7orf71A4D174 169 aa11.86□□□□□ -0.51
LRRC42-201ENST00000319223 ZNF324O75467 553 aaPredicted RBP11.86□□□□□ -0.51
LRRC42-201ENST00000319223 RNASE4P34096 147 aaKnown RBP11.86□□□□□ -0.51
LRRC42-201ENST00000319223 TAS2R60P59551 318 aa11.86□□□□□ -0.51
LRRC42-201ENST00000319223 UBE2G2P60604 165 aa11.86□□□□□ -0.51
LRRC42-201ENST00000319223 EIF5AP63241 154 aaKnown RBP11.86□□□□□ -0.51
LRRC42-201ENST00000319223 FAM222AQ5U5X8 452 aa11.86□□□□□ -0.51
LRRC42-201ENST00000319223 CEMP1Q6PRD7 247 aaPredicted RBP11.86□□□□□ -0.51
LRRC42-201ENST00000319223 Q6ZTC4 211 aa11.86□□□□□ -0.51
LRRC42-201ENST00000319223 SGK494Q96LW2 274 aa11.86□□□□□ -0.51
LRRC42-201ENST00000319223 C20orf144Q9BQM9 153 aa11.86□□□□□ -0.51
LRRC42-201ENST00000319223 DKK2Q9UBU2 259 aa11.86□□□□□ -0.51
LRRC42-201ENST00000319223 TMEM189A5PLL7 270 aa11.86□□□□□ -0.51
LRRC42-201ENST00000319223 H7BYZ3 331 aa11.86□□□□□ -0.51
LRRC42-201ENST00000319223 KMT2CQ8NEZ4 4911 aaKnown RBP11.85□□□□□ -0.51
LRRC42-201ENST00000319223 UMAD1C9J7I0 102 aa11.85□□□□□ -0.51
LRRC42-201ENST00000319223 GPX1P07203 203 aa11.85□□□□□ -0.51
LRRC42-201ENST00000319223 SPART-AS1P0CW21 52 aa11.85□□□□□ -0.51
LRRC42-201ENST00000319223 ARL6IP6Q8N6S5 226 aa11.85□□□□□ -0.51
LRRC42-201ENST00000319223 TVP23CQ96ET8 276 aa11.85□□□□□ -0.51
LRRC42-201ENST00000319223 A0A1B0GV50 99 aa11.84□□□□□ -0.51
LRRC42-201ENST00000319223 A0A1W2PRE2 83 aa11.84□□□□□ -0.51
LRRC42-201ENST00000319223 TCRAP04437 139 aa11.84□□□□□ -0.51
LRRC42-201ENST00000319223 NMBP08949 121 aa11.84□□□□□ -0.51
LRRC42-201ENST00000319223 ZFP69Q49AA0 526 aa11.84□□□□□ -0.51
LRRC42-201ENST00000319223 C5orf17Q8NAS9 161 aa11.84□□□□□ -0.51
LRRC42-201ENST00000319223 SFT2D1Q8WV19 159 aa11.84□□□□□ -0.51
LRRC42-201ENST00000319223 MBD3L1Q8WWY6 194 aa11.84□□□□□ -0.51
LRRC42-201ENST00000319223 EPDR1Q9UM22 224 aa11.84□□□□□ -0.51
LRRC42-201ENST00000319223 NUPR2A6NF83 97 aa11.83□□□□□ -0.52
LRRC42-201ENST00000319223 FAM74A7A6NL05 159 aa11.83□□□□□ -0.52
LRRC42-201ENST00000319223 NKX2-5P52952 324 aaPredicted RBP11.83□□□□□ -0.52
LRRC42-201ENST00000319223 RNASE8Q8TDE3 154 aaKnown RBP11.83□□□□□ -0.52
LRRC42-201ENST00000319223 NIPSNAP3BQ9BS92 247 aa11.83□□□□□ -0.52
LRRC42-201ENST00000319223 TRBV7-9A0A0J9YWB2 115 aa11.83□□□□□ -0.52
LRRC42-201ENST00000319223 SLC51BQ86UW2 128 aa11.83□□□□□ -0.52
LRRC42-201ENST00000319223 IGLV2-11P01706 119 aa11.82□□□□□ -0.52
LRRC42-201ENST00000319223 DPPA3Q6W0C5 159 aa11.82□□□□□ -0.52
LRRC42-201ENST00000319223 LINC00479Q96M42 142 aa11.82□□□□□ -0.52
LRRC42-201ENST00000319223 TMEM263Q8WUH6 116 aaKnown RBP11.81□□□□□ -0.52
LRRC42-201ENST00000319223 C16orf74Q96GX8 76 aa11.81□□□□□ -0.52
LRRC42-201ENST00000319223 PYGO2Q9BRQ0 406 aa11.81□□□□□ -0.52
LRRC42-201ENST00000319223 LENEPQ9Y5L5 61 aa11.81□□□□□ -0.52
LRRC42-201ENST00000319223 H2AFB1P0C5Y9 115 aa11.8□□□□□ -0.52
LRRC42-201ENST00000319223 TP53TG3Q9ULZ0 132 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms