RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 ZNF502Q8TBZ5 544 aa7.29□□□□□ -1.24
TMEM39A-201ENST00000319172 CD7P09564 240 aa7.29□□□□□ -1.24
TMEM39A-201ENST00000319172 HOXA5P20719 270 aa7.29□□□□□ -1.24
TMEM39A-201ENST00000319172 C9orf139Q6ZV77 190 aa7.29□□□□□ -1.24
TMEM39A-201ENST00000319172 LYPD1Q8N2G4 141 aa7.29□□□□□ -1.24
TMEM39A-201ENST00000319172 CFHR4Q92496 578 aa7.29□□□□□ -1.24
TMEM39A-201ENST00000319172 VPREB3Q9UKI3 123 aa7.29□□□□□ -1.24
TMEM39A-201ENST00000319172 TRAV9-1A0A075B6T8 112 aa7.29□□□□□ -1.24
TMEM39A-201ENST00000319172 SNCGO76070 127 aa7.29□□□□□ -1.24
TMEM39A-201ENST00000319172 ZNF138P52744 262 aa7.29□□□□□ -1.24
TMEM39A-201ENST00000319172 C19orf54Q5BKX5 351 aa7.29□□□□□ -1.24
TMEM39A-201ENST00000319172 ATOH7Q8N100 152 aa7.29□□□□□ -1.24
TMEM39A-201ENST00000319172 TMEM191AQ9H0A3 160 aa7.29□□□□□ -1.24
TMEM39A-201ENST00000319172 FREM2Q5SZK8 3169 aa7.28□□□□□ -1.24
TMEM39A-201ENST00000319172 CTSGP08311 255 aa7.28□□□□□ -1.24
TMEM39A-201ENST00000319172 NUP35Q8NFH5 326 aa7.28□□□□□ -1.24
TMEM39A-201ENST00000319172 PRELID3AQ96N28 172 aa7.28□□□□□ -1.24
TMEM39A-201ENST00000319172 RNF114Q9Y508 228 aa7.28□□□□□ -1.24
TMEM39A-201ENST00000319172 LY96Q9Y6Y9 160 aa7.28□□□□□ -1.24
TMEM39A-201ENST00000319172 FBLL1A6NHQ2 334 aaKnown RBP7.28□□□□□ -1.24
TMEM39A-201ENST00000319172 H3BVH4 76 aa7.28□□□□□ -1.24
TMEM39A-201ENST00000319172 TNFRSF13BO14836 293 aaPredicted RBP7.28□□□□□ -1.24
TMEM39A-201ENST00000319172 FSTL3O95633 263 aa7.28□□□□□ -1.24
TMEM39A-201ENST00000319172 PFN1P07737 140 aaKnown RBP7.28□□□□□ -1.24
TMEM39A-201ENST00000319172 PDE6HQ13956 83 aa7.28□□□□□ -1.24
TMEM39A-201ENST00000319172 MAP1LC3AQ9H492 121 aa7.28□□□□□ -1.24
TMEM39A-201ENST00000319172 NRN1Q9NPD7 142 aa7.28□□□□□ -1.24
TMEM39A-201ENST00000319172 AP5S1Q9NUS5 200 aa7.28□□□□□ -1.24
TMEM39A-201ENST00000319172 HECTD1Q9ULT8 2610 aa7.28□□□□□ -1.24
TMEM39A-201ENST00000319172 SH2D1AO60880 128 aa7.28□□□□□ -1.24
TMEM39A-201ENST00000319172 HNRNPA3P51991 378 aaKnown RBP7.28□□□□□ -1.24
TMEM39A-201ENST00000319172 FANCD2OSQ96PS1 177 aa7.28□□□□□ -1.24
TMEM39A-201ENST00000319172 HSPB8Q9UJY1 196 aa7.28□□□□□ -1.24
TMEM39A-201ENST00000319172 OVOL1O14753 267 aa7.27□□□□□ -1.24
TMEM39A-201ENST00000319172 CRYGCP07315 174 aa7.27□□□□□ -1.24
TMEM39A-201ENST00000319172 SCGB1C2P0DMR2 95 aa7.27□□□□□ -1.24
TMEM39A-201ENST00000319172 FXYD7P58549 80 aa7.27□□□□□ -1.24
TMEM39A-201ENST00000319172 C8orf49Q96NF6 230 aa7.27□□□□□ -1.24
TMEM39A-201ENST00000319172 TRAV21A0A0B4J279 112 aa7.27□□□□□ -1.25
TMEM39A-201ENST00000319172 RPLP1P05386 114 aaKnown RBP7.27□□□□□ -1.25
TMEM39A-201ENST00000319172 SCGB1A1P11684 91 aa7.27□□□□□ -1.25
TMEM39A-201ENST00000319172 HERVK_113P61574 105 aa7.27□□□□□ -1.25
TMEM39A-201ENST00000319172 DEFB136Q30KP8 78 aa7.27□□□□□ -1.25
TMEM39A-201ENST00000319172 Q6AWC8 147 aa7.27□□□□□ -1.25
TMEM39A-201ENST00000319172 WFDC11Q8NEX6 87 aa7.27□□□□□ -1.25
TMEM39A-201ENST00000319172 KIR2DL4Q99706 377 aa7.27□□□□□ -1.25
TMEM39A-201ENST00000319172 C5orf52A6NGY3 159 aa7.27□□□□□ -1.25
TMEM39A-201ENST00000319172 NUDT3O95989 172 aa7.27□□□□□ -1.25
TMEM39A-201ENST00000319172 APOHP02749 345 aaPredicted RBP7.27□□□□□ -1.25
TMEM39A-201ENST00000319172 SMAGPQ0VAQ4 97 aa7.27□□□□□ -1.25
TMEM39A-201ENST00000319172 LYZL1Q6UWQ5 148 aa7.27□□□□□ -1.25
TMEM39A-201ENST00000319172 C8orf86Q6ZUL3 223 aa7.27□□□□□ -1.25
TMEM39A-201ENST00000319172 SPANXA1Q9NS26 97 aa7.27□□□□□ -1.25
TMEM39A-201ENST00000319172 LY6LH3BQJ8 138 aa7.27□□□□□ -1.25
TMEM39A-201ENST00000319172 NDUFS6O75380 124 aaKnown RBP7.27□□□□□ -1.25
TMEM39A-201ENST00000319172 ZNF324O75467 553 aaPredicted RBP7.27□□□□□ -1.25
TMEM39A-201ENST00000319172 PKIAP61925 76 aa7.27□□□□□ -1.25
TMEM39A-201ENST00000319172 C11orf52Q96A22 123 aa7.27□□□□□ -1.25
TMEM39A-201ENST00000319172 FAM167A-AS1Q96KT0 104 aa7.27□□□□□ -1.25
TMEM39A-201ENST00000319172 MIEN1Q9BRT3 115 aa7.27□□□□□ -1.25
TMEM39A-201ENST00000319172 VCX2Q9H322 139 aa7.27□□□□□ -1.25
TMEM39A-201ENST00000319172 INS-IGF2F8WCM5 200 aa7.26□□□□□ -1.25
TMEM39A-201ENST00000319172 ACTL10Q5JWF8 245 aa7.26□□□□□ -1.25
TMEM39A-201ENST00000319172 SAMD13Q5VXD3 122 aa7.26□□□□□ -1.25
TMEM39A-201ENST00000319172 OR11H1Q8NG94 326 aa7.26□□□□□ -1.25
TMEM39A-201ENST00000319172 C18orf15Q96N68 181 aa7.26□□□□□ -1.25
TMEM39A-201ENST00000319172 GNB1LQ9BYB4 327 aa7.26□□□□□ -1.25
TMEM39A-201ENST00000319172 IGKV1D-37A0A075B6S9 117 aa7.26□□□□□ -1.25
TMEM39A-201ENST00000319172 NDUFA4O00483 81 aa7.26□□□□□ -1.25
TMEM39A-201ENST00000319172 FOLR2P14207 255 aa7.26□□□□□ -1.25
TMEM39A-201ENST00000319172 RPL35AP18077 110 aaKnown RBP7.26□□□□□ -1.25
TMEM39A-201ENST00000319172 KRTAP10-9P60411 292 aa7.26□□□□□ -1.25
TMEM39A-201ENST00000319172 SRSF9Q13242 221 aaKnown RBP eCLIP7.26□□□□□ -1.25
TMEM39A-201ENST00000319172 TMEM256Q8N2U0 113 aa7.26□□□□□ -1.25
TMEM39A-201ENST00000319172 ZNF414Q96IQ9 312 aa7.26□□□□□ -1.25
TMEM39A-201ENST00000319172 TMEM14CQ9P0S9 112 aa7.26□□□□□ -1.25
TMEM39A-201ENST00000319172 TNFRSF18Q9Y5U5 241 aa7.26□□□□□ -1.25
TMEM39A-201ENST00000319172 TRAV12-3A0A0B4J271 114 aa7.26□□□□□ -1.25
TMEM39A-201ENST00000319172 DUSP14O95147 198 aaKnown RBP7.26□□□□□ -1.25
TMEM39A-201ENST00000319172 PRSS46E5RG02 174 aa7.25□□□□□ -1.25
TMEM39A-201ENST00000319172 K7EN84 100 aa7.25□□□□□ -1.25
TMEM39A-201ENST00000319172 ORMDL3Q8N138 153 aa7.25□□□□□ -1.25
TMEM39A-201ENST00000319172 OR1N2Q8NGR9 330 aa7.25□□□□□ -1.25
TMEM39A-201ENST00000319172 VGLL1Q99990 258 aa7.25□□□□□ -1.25
TMEM39A-201ENST00000319172 A0A1B0GUS0 222 aa7.25□□□□□ -1.25
TMEM39A-201ENST00000319172 NCR2O95944 276 aa7.25□□□□□ -1.25
TMEM39A-201ENST00000319172 RIPPLY3P57055 190 aa7.25□□□□□ -1.25
TMEM39A-201ENST00000319172 KCNS1Q96KK3 526 aa7.25□□□□□ -1.25
TMEM39A-201ENST00000319172 GP9P14770 177 aa7.25□□□□□ -1.25
TMEM39A-201ENST00000319172 OR10AG1Q8NH19 301 aa7.25□□□□□ -1.25
TMEM39A-201ENST00000319172 EVI2AP22794 236 aa7.24□□□□□ -1.25
TMEM39A-201ENST00000319172 DEFB131AP59861 70 aa7.24□□□□□ -1.25
TMEM39A-201ENST00000319172 TMEM97Q5BJF2 176 aa7.24□□□□□ -1.25
TMEM39A-201ENST00000319172 ARMS2P0C7Q2 107 aa7.24□□□□□ -1.25
TMEM39A-201ENST00000319172 TCTEX1D4Q5JR98 221 aa7.24□□□□□ -1.25
TMEM39A-201ENST00000319172 DEFB104AQ8WTQ1 72 aa7.24□□□□□ -1.25
TMEM39A-201ENST00000319172 V9GYV3 84 aa7.24□□□□□ -1.25
TMEM39A-201ENST00000319172 F6UB75 175 aa7.24□□□□□ -1.25
TMEM39A-201ENST00000319172 CRYGBP07316 175 aa7.24□□□□□ -1.25
TMEM39A-201ENST00000319172 VAMP3Q15836 100 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms