RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 GOLT1BQ9Y3E0 138 aa11.54□□□□□ -0.56
CHFR-202ENST00000315585 TMSB15BA0A087X1C1 80 aa11.54□□□□□ -0.56
CHFR-202ENST00000315585 D6R8Y8 96 aa11.54□□□□□ -0.56
CHFR-202ENST00000315585 LINC01545Q5VT33 79 aa11.54□□□□□ -0.56
CHFR-202ENST00000315585 C5orf56Q8N8D9 126 aa11.54□□□□□ -0.56
CHFR-202ENST00000315585 VGLL1Q99990 258 aa11.54□□□□□ -0.56
CHFR-202ENST00000315585 CFAP46Q8IYW2 2715 aa11.54□□□□□ -0.56
CHFR-202ENST00000315585 ORM1P02763 201 aa11.53□□□□□ -0.56
CHFR-202ENST00000315585 CKS2P33552 79 aa11.53□□□□□ -0.56
CHFR-202ENST00000315585 HIST1H1AQ02539 215 aaPredicted RBP11.53□□□□□ -0.56
CHFR-202ENST00000315585 ZNF124Q15973 351 aa11.53□□□□□ -0.56
CHFR-202ENST00000315585 MAJINQ3KP22 176 aa11.53□□□□□ -0.56
CHFR-202ENST00000315585 SLC25A34Q6PIV7 304 aa11.53□□□□□ -0.56
CHFR-202ENST00000315585 CLEC19AQ6UXS0 136 aa11.53□□□□□ -0.56
CHFR-202ENST00000315585 PMCHL2Q9BQD1 86 aa11.53□□□□□ -0.56
CHFR-202ENST00000315585 ZNF747Q9BV97 191 aa11.53□□□□□ -0.56
CHFR-202ENST00000315585 CNFNQ9BYD5 112 aa11.53□□□□□ -0.56
CHFR-202ENST00000315585 IGLC6P0CF74 106 aa11.52□□□□□ -0.56
CHFR-202ENST00000315585 ZNF138P52744 262 aa11.52□□□□□ -0.56
CHFR-202ENST00000315585 TRAV40A0A0B4J280 105 aa11.52□□□□□ -0.57
CHFR-202ENST00000315585 CRIP2P52943 208 aaPredicted RBP11.52□□□□□ -0.57
CHFR-202ENST00000315585 LINC01559Q495D7 138 aa11.52□□□□□ -0.57
CHFR-202ENST00000315585 Q71RC1 249 aaPredicted RBP11.52□□□□□ -0.57
CHFR-202ENST00000315585 MEGF9Q9H1U4 602 aa11.52□□□□□ -0.57
CHFR-202ENST00000315585 IGHG4P01861 327 aa11.51□□□□□ -0.57
CHFR-202ENST00000315585 PRR31Q5SQ13 230 aa11.51□□□□□ -0.57
CHFR-202ENST00000315585 TMEM78Q5T7P6 136 aa11.51□□□□□ -0.57
CHFR-202ENST00000315585 AMN1Q8IY45 258 aa11.51□□□□□ -0.57
CHFR-202ENST00000315585 DPF1Q92782 380 aa11.51□□□□□ -0.57
CHFR-202ENST00000315585 CCDC140Q96MF4 163 aa11.51□□□□□ -0.57
CHFR-202ENST00000315585 BEX4Q9NWD9 120 aaPredicted RBP11.51□□□□□ -0.57
CHFR-202ENST00000315585 TMEM213A2RRL7 107 aa11.51□□□□□ -0.57
CHFR-202ENST00000315585 IFI27P40305 119 aaPredicted RBP11.51□□□□□ -0.57
CHFR-202ENST00000315585 PSMG4Q5JS54 123 aa11.51□□□□□ -0.57
CHFR-202ENST00000315585 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.51□□□□□ -0.57
CHFR-202ENST00000315585 C12orf54Q6X4T0 127 aa11.51□□□□□ -0.57
CHFR-202ENST00000315585 NPFFR1Q9GZQ6 430 aa11.51□□□□□ -0.57
CHFR-202ENST00000315585 PPP1R14DQ9NXH3 145 aa11.51□□□□□ -0.57
CHFR-202ENST00000315585 TRAV41A0A0B4J266 112 aa11.5□□□□□ -0.57
CHFR-202ENST00000315585 IGHV3-35A0A0C4DH35 117 aa11.5□□□□□ -0.57
CHFR-202ENST00000315585 MRPL51Q4U2R6 128 aaKnown RBP11.5□□□□□ -0.57
CHFR-202ENST00000315585 Q8TAT8 98 aa11.5□□□□□ -0.57
CHFR-202ENST00000315585 ORAOV1Q8WV07 137 aa11.5□□□□□ -0.57
CHFR-202ENST00000315585 NRGNQ92686 78 aa11.5□□□□□ -0.57
CHFR-202ENST00000315585 SIGLEC8Q9NYZ4 499 aa11.5□□□□□ -0.57
CHFR-202ENST00000315585 HBDP02042 147 aa11.5□□□□□ -0.57
CHFR-202ENST00000315585 LINC00173Q6ZV60 143 aa11.5□□□□□ -0.57
CHFR-202ENST00000315585 SMIM15Q7Z3B0 74 aa11.5□□□□□ -0.57
CHFR-202ENST00000315585 LINC01356Q8N9X3 169 aa11.5□□□□□ -0.57
CHFR-202ENST00000315585 WNK2Q9Y3S1 2297 aa11.5□□□□□ -0.57
CHFR-202ENST00000315585 G3V318 75 aa11.49□□□□□ -0.57
CHFR-202ENST00000315585 H3BUA1 57 aa11.49□□□□□ -0.57
CHFR-202ENST00000315585 BRI3O95415 125 aa11.49□□□□□ -0.57
CHFR-202ENST00000315585 HINT1P49773 126 aaPredicted RBP11.49□□□□□ -0.57
CHFR-202ENST00000315585 LRRC75A-AS1Q8N1F1 130 aa11.49□□□□□ -0.57
CHFR-202ENST00000315585 STPG4Q8N801 248 aa11.49□□□□□ -0.57
CHFR-202ENST00000315585 LENEPQ9Y5L5 61 aa11.49□□□□□ -0.57
CHFR-202ENST00000315585 TCF21O43680 179 aa11.49□□□□□ -0.57
CHFR-202ENST00000315585 FOSL1P15407 271 aa11.49□□□□□ -0.57
CHFR-202ENST00000315585 ZNF80P51504 273 aaPredicted RBP11.49□□□□□ -0.57
CHFR-202ENST00000315585 MAP1LC3AQ9H492 121 aa11.49□□□□□ -0.57
CHFR-202ENST00000315585 U3KQE9 123 aa11.49□□□□□ -0.57
CHFR-202ENST00000315585 CLPSL1A2RUU4 121 aa11.48□□□□□ -0.57
CHFR-202ENST00000315585 J3QLI3 93 aa11.48□□□□□ -0.57
CHFR-202ENST00000315585 ZNF738Q8NE65 137 aa11.48□□□□□ -0.57
CHFR-202ENST00000315585 NXT2Q9NPJ8 142 aaKnown RBP11.48□□□□□ -0.57
CHFR-202ENST00000315585 TIMM8BQ9Y5J9 83 aaPredicted RBP11.48□□□□□ -0.57
CHFR-202ENST00000315585 DCHS2Q6V1P9 2916 aa11.48□□□□□ -0.57
CHFR-202ENST00000315585 LOC389332A0A1B0GUA5 103 aa11.48□□□□□ -0.57
CHFR-202ENST00000315585 LGALS9BQ3B8N2 356 aa11.48□□□□□ -0.57
CHFR-202ENST00000315585 LGALS9CQ6DKI2 356 aa11.48□□□□□ -0.57
CHFR-202ENST00000315585 USMG5Q96IX5 58 aa11.48□□□□□ -0.57
CHFR-202ENST00000315585 SCRT2Q9NQ03 307 aa11.48□□□□□ -0.57
CHFR-202ENST00000315585 IGHV3OR16-10A0A075B7F0 116 aa11.47□□□□□ -0.57
CHFR-202ENST00000315585 IGHV3OR16-8A0A075B7F1 116 aa11.47□□□□□ -0.57
CHFR-202ENST00000315585 hDV102S1A0JD36 115 aa11.47□□□□□ -0.57
CHFR-202ENST00000315585 H0Y8G0 127 aa11.47□□□□□ -0.57
CHFR-202ENST00000315585 HLA-DMBP28068 263 aa11.47□□□□□ -0.57
CHFR-202ENST00000315585 IGFL4Q6B9Z1 124 aa11.47□□□□□ -0.57
CHFR-202ENST00000315585 BRD3OSQ6XYD6 125 aa11.47□□□□□ -0.57
CHFR-202ENST00000315585 C9orf47Q6ZRZ4 202 aa11.47□□□□□ -0.57
CHFR-202ENST00000315585 C9orf139Q6ZV77 190 aa11.47□□□□□ -0.57
CHFR-202ENST00000315585 OR1N2Q8NGR9 330 aa11.47□□□□□ -0.57
CHFR-202ENST00000315585 TFPI2P48307 235 aa11.47□□□□□ -0.57
CHFR-202ENST00000315585 LOXL1Q08397 574 aaPredicted RBP11.47□□□□□ -0.57
CHFR-202ENST00000315585 AKAP6Q13023 2319 aa11.46□□□□□ -0.57
CHFR-202ENST00000315585 TRGV3P03979 118 aa11.46□□□□□ -0.57
CHFR-202ENST00000315585 IGF1P05019 195 aa11.46□□□□□ -0.57
CHFR-202ENST00000315585 ERCC8Q13216 396 aa11.46□□□□□ -0.57
CHFR-202ENST00000315585 DEFB113Q30KQ7 82 aa11.46□□□□□ -0.57
CHFR-202ENST00000315585 C8orf86Q6ZUL3 223 aa11.46□□□□□ -0.57
CHFR-202ENST00000315585 NDUFA4O00483 81 aa11.46□□□□□ -0.58
CHFR-202ENST00000315585 IGHV4-38-2P0DP08 117 aa11.46□□□□□ -0.58
CHFR-202ENST00000315585 C16orf92Q96LL3 132 aa11.46□□□□□ -0.58
CHFR-202ENST00000315585 AGPAT4-IT1Q9H0P7 198 aa11.46□□□□□ -0.58
CHFR-202ENST00000315585 ZNF462Q96JM2 2506 aa11.46□□□□□ -0.58
CHFR-202ENST00000315585 USP9XQ93008 2570 aaPredicted RBP11.45□□□□□ -0.58
CHFR-202ENST00000315585 ARL3P36405 182 aa11.45□□□□□ -0.58
CHFR-202ENST00000315585 CACNG7P62955 275 aa11.45□□□□□ -0.58
CHFR-202ENST00000315585 C19orf54Q5BKX5 351 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms