RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 NXT2Q9NPJ8 142 aaKnown RBP4.85□□□□□ -1.63
PRKDC-201ENST00000314191 SRSF1Q07955 248 aaKnown RBP eCLIP4.85□□□□□ -1.633e-6■■■□□ 17.8
PRKDC-201ENST00000314191 KLF2Q9Y5W3 355 aaPredicted RBP4.85□□□□□ -1.63
PRKDC-201ENST00000314191 ATP5LO75964 103 aa4.85□□□□□ -1.63
PRKDC-201ENST00000314191 ST20Q9HBF5 79 aa4.85□□□□□ -1.63
PRKDC-201ENST00000314191 SMIM27A0A1W2PRY6 76 aa4.85□□□□□ -1.63
PRKDC-201ENST00000314191 hDV102S1A0JD36 115 aa4.85□□□□□ -1.63
PRKDC-201ENST00000314191 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.85□□□□□ -1.63
PRKDC-201ENST00000314191 TMEM170BQ5T4T1 132 aa4.85□□□□□ -1.63
PRKDC-201ENST00000314191 FANCD2OSQ96PS1 177 aa4.85□□□□□ -1.63
PRKDC-201ENST00000314191 HIST1H4GQ99525 98 aa4.84□□□□□ -1.63
PRKDC-201ENST00000314191 DNLZQ5SXM8 178 aa4.84□□□□□ -1.63
PRKDC-201ENST00000314191 PPBPP02775 128 aa4.84□□□□□ -1.63
PRKDC-201ENST00000314191 TNFRSF18Q9Y5U5 241 aa4.84□□□□□ -1.63
PRKDC-201ENST00000314191 A8MWP6 167 aa4.84□□□□□ -1.63
PRKDC-201ENST00000314191 NSUN5P1Q3KNT7 163 aa4.84□□□□□ -1.63
PRKDC-201ENST00000314191 TTC32Q5I0X7 151 aa4.84□□□□□ -1.63
PRKDC-201ENST00000314191 C8orf86Q6ZUL3 223 aa4.84□□□□□ -1.63
PRKDC-201ENST00000314191 IGF2BP2-AS1Q96M15 143 aa4.84□□□□□ -1.63
PRKDC-201ENST00000314191 LMO4P61968 165 aa4.84□□□□□ -1.63
PRKDC-201ENST00000314191 CFHR4Q92496 578 aa4.84□□□□□ -1.63
PRKDC-201ENST00000314191 ANXA2RQ3ZCQ2 193 aa4.84□□□□□ -1.63
PRKDC-201ENST00000314191 C14orf178Q8N769 122 aaPredicted RBP4.84□□□□□ -1.63
PRKDC-201ENST00000314191 LY6G5BQ8NDX9 201 aa4.84□□□□□ -1.63
PRKDC-201ENST00000314191 DOPEY1Q5JWR5 2465 aa4.84□□□□□ -1.63
PRKDC-201ENST00000314191 FAM231BA6NCW3 169 aa4.84□□□□□ -1.64
PRKDC-201ENST00000314191 PRAC2D3DTV9 90 aa4.84□□□□□ -1.64
PRKDC-201ENST00000314191 STHQ8IWL8 128 aa4.84□□□□□ -1.64
PRKDC-201ENST00000314191 TMEM158Q8WZ71 300 aa4.84□□□□□ -1.64
PRKDC-201ENST00000314191 WI2-2373I1.2A0A1W2PRP0 233 aa4.84□□□□□ -1.64
PRKDC-201ENST00000314191 GAGE10A6NGK3 116 aa4.84□□□□□ -1.64
PRKDC-201ENST00000314191 SYS1-DBNDD2H3BUS1 97 aa4.84□□□□□ -1.64
PRKDC-201ENST00000314191 EREGO14944 169 aa4.84□□□□□ -1.64
PRKDC-201ENST00000314191 IFI27P40305 119 aaPredicted RBP4.84□□□□□ -1.64
PRKDC-201ENST00000314191 DEFB131AP59861 70 aa4.83□□□□□ -1.64
PRKDC-201ENST00000314191 FAM104BQ5XKR9 115 aa4.83□□□□□ -1.64
PRKDC-201ENST00000314191 KLHL30-AS1Q8NEE0 82 aa4.83□□□□□ -1.64
PRKDC-201ENST00000314191 NDUFS6O75380 124 aaKnown RBP4.83□□□□□ -1.64
PRKDC-201ENST00000314191 IGHV3-73A0A0B4J1V6 119 aa4.83□□□□□ -1.64
PRKDC-201ENST00000314191 TMEM95Q3KNT9 176 aa4.83□□□□□ -1.64
PRKDC-201ENST00000314191 CT83Q5H943 113 aa4.83□□□□□ -1.64
PRKDC-201ENST00000314191 AJUBAQ96IF1 538 aa4.83□□□□□ -1.64
PRKDC-201ENST00000314191 EGR2P11161 476 aaPredicted RBP4.83□□□□□ -1.64
PRKDC-201ENST00000314191 F8P00451 2351 aa4.83□□□□□ -1.64
PRKDC-201ENST00000314191 AMMECR1LQ6DCA0 310 aa4.83□□□□□ -1.64
PRKDC-201ENST00000314191 C11orf71Q6IPW1 123 aa4.83□□□□□ -1.64
PRKDC-201ENST00000314191 TNFRSF6BO95407 300 aa4.83□□□□□ -1.64
PRKDC-201ENST00000314191 GATA3P23771 443 aa4.83□□□□□ -1.64
PRKDC-201ENST00000314191 EMP1P54849 157 aa4.83□□□□□ -1.64
PRKDC-201ENST00000314191 IGKV3OR2-268A0A0C4DH90 116 aa4.83□□□□□ -1.64
PRKDC-201ENST00000314191 HOXA3O43365 443 aaPredicted RBP4.83□□□□□ -1.64
PRKDC-201ENST00000314191 NUTF2P61970 127 aaKnown RBP4.83□□□□□ -1.64
PRKDC-201ENST00000314191 MRPL51Q4U2R6 128 aaKnown RBP4.83□□□□□ -1.64
PRKDC-201ENST00000314191 LINC01548A6NM66 108 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 KNCNA6PVL3 124 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 PSMB2P49721 201 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 MPV17L2Q567V2 206 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 TRAV26-2A0A0B4J265 109 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 COA6Q5JTJ3 125 aaKnown RBP4.82□□□□□ -1.64
PRKDC-201ENST00000314191 SMPXQ9UHP9 88 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 GTSCR1Q86UQ5 136 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 KLF12Q9Y4X4 402 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 SPINK13Q1W4C9 94 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 JMJD8Q96S16 334 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 DSCAML1Q8TD84 2053 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 A0A087WWL8 130 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 ORMDL2Q53FV1 153 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 OR2K2Q8NGT1 345 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 NDUFA4O00483 81 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 TMEM190Q8WZ59 177 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 ODF3BA8MYP8 253 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 NPYP01303 97 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 LGALS3P17931 250 aaKnown RBP4.82□□□□□ -1.64
PRKDC-201ENST00000314191 H7C2G1 150 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 PRSS2P07478 247 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 PRORYQ9H606 182 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 RRN3P1Q2M238 152 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 COPS9Q8WXC6 57 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 ZNF106Q9H2Y7 1883 aaKnown RBP4.82□□□□□ -1.64
PRKDC-201ENST00000314191 SAP30O75446 220 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 ZNF876PQ49A33 203 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 C5orf56Q8N8D9 126 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 DPH3P1Q9H4G8 78 aa4.82□□□□□ -1.64
PRKDC-201ENST00000314191 IGKCP01834 107 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 C1orf159Q96HA4 380 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 UBE2E2Q96LR5 201 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 H7C1H1 209 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 PRSS57Q6UWY2 283 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 TRGV2A0A075B6R0 118 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 DPM2O94777 84 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 IGHV3-53P01767 116 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 KLK9Q9UKQ9 250 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 PRRC2AP48634 2157 aaKnown RBP4.81□□□□□ -1.64
PRKDC-201ENST00000314191 TMEM238LA0A1B0GVL6 79 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 A6NJY4 79 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 SAMD13Q5VXD3 122 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 IGHV7-4-1A0A0J9YVY3 117 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 FABP2P12104 132 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 CYSLTR1Q9Y271 337 aa4.81□□□□□ -1.64
PRKDC-201ENST00000314191 LY6LH3BQJ8 138 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms