RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 NPIPB6E9PJ23 425 aa11.34□□□□□ -0.59
SCUBE2-201ENST00000309263 H3BRM9 83 aa11.34□□□□□ -0.59
SCUBE2-201ENST00000309263 K7EP34 96 aa11.34□□□□□ -0.59
SCUBE2-201ENST00000309263 SIGLEC15Q6ZMC9 328 aa11.34□□□□□ -0.59
SCUBE2-201ENST00000309263 UFC1Q9Y3C8 167 aa11.34□□□□□ -0.59
SCUBE2-201ENST00000309263 SMIM13P0DJ93 91 aa11.34□□□□□ -0.59
SCUBE2-201ENST00000309263 LINC00574Q9H8X3 128 aa11.34□□□□□ -0.59
SCUBE2-201ENST00000309263 JMJD1CQ15652 2540 aa11.33□□□□□ -0.59
SCUBE2-201ENST00000309263 VSTM5A8MXK1 200 aa11.33□□□□□ -0.6
SCUBE2-201ENST00000309263 FXYD2P54710 66 aa11.33□□□□□ -0.6
SCUBE2-201ENST00000309263 FAM169BQ8N8A8 192 aa11.33□□□□□ -0.6
SCUBE2-201ENST00000309263 TIMM23O14925 209 aa11.33□□□□□ -0.6
SCUBE2-201ENST00000309263 LINC01560Q8TB33 94 aa11.33□□□□□ -0.6
SCUBE2-201ENST00000309263 DCHS2Q6V1P9 2916 aa11.33□□□□□ -0.6
SCUBE2-201ENST00000309263 NDUFS7O75251 213 aa11.33□□□□□ -0.6
SCUBE2-201ENST00000309263 SHANK2-AS3Q9BTD1 123 aa11.33□□□□□ -0.6
SCUBE2-201ENST00000309263 AGRNO00468 2067 aa11.33□□□□□ -0.6
SCUBE2-201ENST00000309263 EPG5Q9HCE0 2579 aa11.32□□□□□ -0.6
SCUBE2-201ENST00000309263 A0A1W2PPM0 123 aa11.32□□□□□ -0.6
SCUBE2-201ENST00000309263 FGF6P10767 208 aa11.32□□□□□ -0.6
SCUBE2-201ENST00000309263 PIP4P2Q8N4L2 257 aa11.32□□□□□ -0.6
SCUBE2-201ENST00000309263 IGKV2D-26A0A0A0MRZ7 120 aa11.32□□□□□ -0.6
SCUBE2-201ENST00000309263 TEX48A0A1B0GUV7 120 aa11.32□□□□□ -0.6
SCUBE2-201ENST00000309263 TEX22C9J3V5 150 aa11.32□□□□□ -0.6
SCUBE2-201ENST00000309263 EGR2P11161 476 aaPredicted RBP11.32□□□□□ -0.6
SCUBE2-201ENST00000309263 MRGPRG-AS1Q2M3A8 158 aa11.32□□□□□ -0.6
SCUBE2-201ENST00000309263 ZNF491Q8N8L2 437 aa11.32□□□□□ -0.6
SCUBE2-201ENST00000309263 HIVEP2P31629 2446 aa11.32□□□□□ -0.6
SCUBE2-201ENST00000309263 APOBEC3AP31941 199 aaPredicted RBP11.32□□□□□ -0.6
SCUBE2-201ENST00000309263 TMEM155Q4W5P6 130 aa11.32□□□□□ -0.6
SCUBE2-201ENST00000309263 GFRALQ6UXV0 394 aa11.32□□□□□ -0.6
SCUBE2-201ENST00000309263 BOD1L2Q8IYS8 172 aa11.32□□□□□ -0.6
SCUBE2-201ENST00000309263 PPIAL4CA0A0B4J2A2 164 aa11.31□□□□□ -0.6
SCUBE2-201ENST00000309263 PPIAL4GP0DN37 164 aa11.31□□□□□ -0.6
SCUBE2-201ENST00000309263 AMTNQ6UX39 209 aa11.31□□□□□ -0.6
SCUBE2-201ENST00000309263 RNASE6Q93091 150 aaKnown RBP11.31□□□□□ -0.6
SCUBE2-201ENST00000309263 VGLL1Q99990 258 aa11.31□□□□□ -0.6
SCUBE2-201ENST00000309263 CRYBG3Q68DQ2 2970 aa11.31□□□□□ -0.6
SCUBE2-201ENST00000309263 INS-IGF2F8WCM5 200 aa11.31□□□□□ -0.6
SCUBE2-201ENST00000309263 ZC2HC1BQ5TFG8 222 aa11.31□□□□□ -0.6
SCUBE2-201ENST00000309263 MSRB2Q9Y3D2 182 aa11.31□□□□□ -0.6
SCUBE2-201ENST00000309263 ACANP16112 2415 aa11.31□□□□□ -0.6
SCUBE2-201ENST00000309263 I3L2K1 104 aa11.31□□□□□ -0.6
SCUBE2-201ENST00000309263 ERCC8Q13216 396 aa11.31□□□□□ -0.6
SCUBE2-201ENST00000309263 MAP1LC3AQ9H492 121 aa11.31□□□□□ -0.6
SCUBE2-201ENST00000309263 LGALS9BQ3B8N2 356 aa11.3□□□□□ -0.6
SCUBE2-201ENST00000309263 LGALS9CQ6DKI2 356 aa11.3□□□□□ -0.6
SCUBE2-201ENST00000309263 OR9G4Q8NGQ1 327 aa11.3□□□□□ -0.6
SCUBE2-201ENST00000309263 IGHV3OR16-10A0A075B7F0 116 aa11.3□□□□□ -0.6
SCUBE2-201ENST00000309263 BUB1B-PAK6H3BSN5 160 aa11.3□□□□□ -0.6
SCUBE2-201ENST00000309263 PRRG2O14669 202 aa11.3□□□□□ -0.6
SCUBE2-201ENST00000309263 RBPJQ06330 500 aa11.3□□□□□ -0.6
SCUBE2-201ENST00000309263 OR4X2Q8NGF9 303 aa11.3□□□□□ -0.6
SCUBE2-201ENST00000309263 G3V4G9 280 aa11.29□□□□□ -0.6
SCUBE2-201ENST00000309263 K7EIM0 57 aa11.29□□□□□ -0.6
SCUBE2-201ENST00000309263 KLRD1Q13241 179 aa11.29□□□□□ -0.6
SCUBE2-201ENST00000309263 Q5PR19 223 aa11.29□□□□□ -0.6
SCUBE2-201ENST00000309263 SAMD13Q5VXD3 122 aa11.29□□□□□ -0.6
SCUBE2-201ENST00000309263 TRAV26-2A0A0B4J265 109 aa11.29□□□□□ -0.6
SCUBE2-201ENST00000309263 SPRY2O43597 315 aa11.29□□□□□ -0.6
SCUBE2-201ENST00000309263 NDUFA3O95167 84 aa11.29□□□□□ -0.6
SCUBE2-201ENST00000309263 ZNF80P51504 273 aaPredicted RBP11.29□□□□□ -0.6
SCUBE2-201ENST00000309263 RPS20P60866 119 aaKnown RBP11.29□□□□□ -0.6
SCUBE2-201ENST00000309263 NPFFR1Q9GZQ6 430 aa11.29□□□□□ -0.6
SCUBE2-201ENST00000309263 A0A0G2JNJ9 132 aa11.29□□□□□ -0.6
SCUBE2-201ENST00000309263 Q6AWC8 147 aa11.29□□□□□ -0.6
SCUBE2-201ENST00000309263 CHAC1Q9BUX1 264 aa11.29□□□□□ -0.6
SCUBE2-201ENST00000309263 Q9UFV3 132 aa11.29□□□□□ -0.6
SCUBE2-201ENST00000309263 TRAV40A0A0B4J280 105 aa11.28□□□□□ -0.6
SCUBE2-201ENST00000309263 SCGB2A2Q13296 93 aa11.28□□□□□ -0.6
SCUBE2-201ENST00000309263 UFSP1Q6NVU6 142 aa11.28□□□□□ -0.6
SCUBE2-201ENST00000309263 RNF182Q8N6D2 247 aa11.28□□□□□ -0.6
SCUBE2-201ENST00000309263 TMEM158Q8WZ71 300 aa11.28□□□□□ -0.6
SCUBE2-201ENST00000309263 TMEM14CQ9P0S9 112 aa11.28□□□□□ -0.6
SCUBE2-201ENST00000309263 PKD1L2Q7Z442 2459 aa11.28□□□□□ -0.6
SCUBE2-201ENST00000309263 FN1P02751 2386 aaKnown RBP11.28□□□□□ -0.6
SCUBE2-201ENST00000309263 H3BRN7 92 aa11.28□□□□□ -0.6
SCUBE2-201ENST00000309263 ADAMTSL5Q6ZMM2 481 aa11.27□□□□□ -0.6
SCUBE2-201ENST00000309263 HIF1ANQ9NWT6 349 aa11.27□□□□□ -0.6
SCUBE2-201ENST00000309263 A0A1B0GW15 77 aa11.27□□□□□ -0.61
SCUBE2-201ENST00000309263 SH2D6Q7Z4S9 175 aa11.27□□□□□ -0.61
SCUBE2-201ENST00000309263 H3BMG7 143 aa11.27□□□□□ -0.61
SCUBE2-201ENST00000309263 ETDBQ3ZM63 59 aa11.27□□□□□ -0.61
SCUBE2-201ENST00000309263 LINC00311Q8N616 119 aa11.27□□□□□ -0.61
SCUBE2-201ENST00000309263 PRR25Q96S07 402 aa11.27□□□□□ -0.61
SCUBE2-201ENST00000309263 TMEM8BA6NDV4 472 aa11.26□□□□□ -0.61
SCUBE2-201ENST00000309263 HIST1H4GQ99525 98 aa11.26□□□□□ -0.61
SCUBE2-201ENST00000309263 IGKCP01834 107 aa11.26□□□□□ -0.61
SCUBE2-201ENST00000309263 ABHD17AQ96GS6 310 aa11.26□□□□□ -0.61
SCUBE2-201ENST00000309263 TNFRSF6BO95407 300 aa11.25□□□□□ -0.61
SCUBE2-201ENST00000309263 MFAP4P55083 255 aa11.25□□□□□ -0.61
SCUBE2-201ENST00000309263 WFDC2Q14508 124 aa11.25□□□□□ -0.61
SCUBE2-201ENST00000309263 OR5A1Q8NGJ0 315 aa11.25□□□□□ -0.61
SCUBE2-201ENST00000309263 WFDC12Q8WWY7 111 aa11.25□□□□□ -0.61
SCUBE2-201ENST00000309263 CLEC2AQ6UVW9 174 aa11.25□□□□□ -0.61
SCUBE2-201ENST00000309263 NUP37Q8NFH4 326 aa11.25□□□□□ -0.61
SCUBE2-201ENST00000309263 TSSC4Q9Y5U2 329 aaPredicted RBP11.25□□□□□ -0.61
SCUBE2-201ENST00000309263 IGFL2Q6UWQ7 119 aa11.25□□□□□ -0.61
SCUBE2-201ENST00000309263 ARPC1AQ92747 370 aa11.25□□□□□ -0.61
SCUBE2-201ENST00000309263 TRBV25-1A0A075B6N4 114 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms