RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 KLK9Q9UKQ9 250 aa7.22□□□□□ -1.25
PTPRE-202ENST00000306042 CTSGP08311 255 aa7.22□□□□□ -1.25
PTPRE-202ENST00000306042 OR10AG1Q8NH19 301 aa7.22□□□□□ -1.25
PTPRE-202ENST00000306042 WIPF2Q8TF74 440 aaPredicted RBP7.22□□□□□ -1.25
PTPRE-202ENST00000306042 TNRC6BQ9UPQ9 1833 aaKnown RBP7.22□□□□□ -1.25
PTPRE-202ENST00000306042 TRAV25A0A0B4J276 109 aa7.21□□□□□ -1.25
PTPRE-202ENST00000306042 IZUMO1RA6ND01 250 aa7.21□□□□□ -1.25
PTPRE-202ENST00000306042 CRXO43186 299 aaPredicted RBP7.21□□□□□ -1.25
PTPRE-202ENST00000306042 CRYGCP07315 174 aa7.21□□□□□ -1.25
PTPRE-202ENST00000306042 CFHR3Q02985 330 aa7.21□□□□□ -1.25
PTPRE-202ENST00000306042 GPHB5Q86YW7 130 aa7.21□□□□□ -1.25
PTPRE-202ENST00000306042 UBE2CO00762 179 aa7.21□□□□□ -1.25
PTPRE-202ENST00000306042 ZNF876PQ49A33 203 aa7.21□□□□□ -1.25
PTPRE-202ENST00000306042 APRG1Q8IVJ8 170 aa7.21□□□□□ -1.25
PTPRE-202ENST00000306042 TEX22C9J3V5 150 aa7.21□□□□□ -1.26
PTPRE-202ENST00000306042 CYYR1Q96J86 154 aa7.21□□□□□ -1.26
PTPRE-202ENST00000306042 TMEM14CQ9P0S9 112 aa7.21□□□□□ -1.26
PTPRE-202ENST00000306042 IGHV1OR15-1A0A075B7D0 117 aa7.21□□□□□ -1.26
PTPRE-202ENST00000306042 GAGE12BA1L429 117 aa7.21□□□□□ -1.26
PTPRE-202ENST00000306042 GAGE7O76087 117 aa7.21□□□□□ -1.26
PTPRE-202ENST00000306042 GAGE12FP0CL80 117 aa7.21□□□□□ -1.26
PTPRE-202ENST00000306042 GAGE12GP0CL81 117 aa7.21□□□□□ -1.26
PTPRE-202ENST00000306042 GAGE12IP0CL82 117 aa7.21□□□□□ -1.26
PTPRE-202ENST00000306042 MALP21145 153 aa7.21□□□□□ -1.26
PTPRE-202ENST00000306042 IQCJQ1A5X6 159 aa7.21□□□□□ -1.26
PTPRE-202ENST00000306042 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.21□□□□□ -1.26
PTPRE-202ENST00000306042 OR10D4PQ8NGN7 298 aa7.21□□□□□ -1.26
PTPRE-202ENST00000306042 SPATA25Q9BR10 227 aa7.21□□□□□ -1.26
PTPRE-202ENST00000306042 CD300EQ496F6 205 aaPredicted RBP7.2□□□□□ -1.26
PTPRE-202ENST00000306042 NUDT10Q8NFP7 164 aa7.2□□□□□ -1.26
PTPRE-202ENST00000306042 NUDT11Q96G61 164 aa7.2□□□□□ -1.26
PTPRE-202ENST00000306042 TGIF2-C20orf24A0A0A6YYL0 155 aa7.2□□□□□ -1.26
PTPRE-202ENST00000306042 DIRC3C9JPN6 131 aa7.2□□□□□ -1.26
PTPRE-202ENST00000306042 LEPROTL1O95214 131 aa7.2□□□□□ -1.26
PTPRE-202ENST00000306042 GZMBP10144 247 aa7.2□□□□□ -1.26
PTPRE-202ENST00000306042 HINT1P49773 126 aaPredicted RBP7.2□□□□□ -1.26
PTPRE-202ENST00000306042 SSBP2P81877 361 aaPredicted RBP7.2□□□□□ -1.26
PTPRE-202ENST00000306042 Q86TA4 180 aa7.2□□□□□ -1.26
PTPRE-202ENST00000306042 TSKUQ8WUA8 353 aa7.2□□□□□ -1.26
PTPRE-202ENST00000306042 MKI67P46013 3256 aaKnown RBP7.2□□□□□ -1.26
PTPRE-202ENST00000306042 K7EMT4 169 aa7.2□□□□□ -1.26
PTPRE-202ENST00000306042 IGF1P05019 195 aa7.2□□□□□ -1.26
PTPRE-202ENST00000306042 FAM90A2PQ658T7 463 aa7.2□□□□□ -1.26
PTPRE-202ENST00000306042 SH2D6Q7Z4S9 175 aa7.2□□□□□ -1.26
PTPRE-202ENST00000306042 LINC01006Q8NI28 216 aa7.2□□□□□ -1.26
PTPRE-202ENST00000306042 LINC01548A6NM66 108 aa7.19□□□□□ -1.26
PTPRE-202ENST00000306042 TRGC2P03986 189 aa7.19□□□□□ -1.26
PTPRE-202ENST00000306042 SNRPEP62304 92 aaKnown RBP7.19□□□□□ -1.26
PTPRE-202ENST00000306042 DLX4Q92988 240 aaPredicted RBP7.19□□□□□ -1.26
PTPRE-202ENST00000306042 ALKBH7Q9BT30 221 aaPredicted RBP7.19□□□□□ -1.26
PTPRE-202ENST00000306042 SLC25A2Q9BXI2 301 aa7.19□□□□□ -1.26
PTPRE-202ENST00000306042 CBY1Q9Y3M2 126 aa7.19□□□□□ -1.26
PTPRE-202ENST00000306042 ARHGAP32A7KAX9 2087 aa7.19□□□□□ -1.26
PTPRE-202ENST00000306042 IGKV1-17P01599 117 aa7.19□□□□□ -1.26
PTPRE-202ENST00000306042 PPBPP02775 128 aa7.19□□□□□ -1.26
PTPRE-202ENST00000306042 AZU1P20160 251 aa7.19□□□□□ -1.26
PTPRE-202ENST00000306042 SRSF9Q13242 221 aaKnown RBP eCLIP7.19□□□□□ -1.26
PTPRE-202ENST00000306042 C5orf30Q96GV9 206 aa7.19□□□□□ -1.26
PTPRE-202ENST00000306042 SETD2Q9BYW2 2564 aaPredicted RBP7.19□□□□□ -1.26
PTPRE-202ENST00000306042 IFI27P40305 119 aaPredicted RBP7.19□□□□□ -1.26
PTPRE-202ENST00000306042 MTORP42345 2549 aa7.19□□□□□ -1.26
PTPRE-202ENST00000306042 CCL18P55774 89 aa7.19□□□□□ -1.26
PTPRE-202ENST00000306042 CHD9Q3L8U1 2897 aa7.19□□□□□ -1.26
PTPRE-202ENST00000306042 SCGB3A1Q96QR1 104 aa7.19□□□□□ -1.26
PTPRE-202ENST00000306042 VWC2LB2RUY7 222 aa7.19□□□□□ -1.26
PTPRE-202ENST00000306042 PFN1P07737 140 aaKnown RBP7.19□□□□□ -1.26
PTPRE-202ENST00000306042 CFAP161Q6P656 301 aa7.19□□□□□ -1.26
PTPRE-202ENST00000306042 CSTL1Q9H114 145 aa7.19□□□□□ -1.26
PTPRE-202ENST00000306042 NIT2Q9NQR4 276 aa7.19□□□□□ -1.26
PTPRE-202ENST00000306042 TOMM7Q9P0U1 55 aa7.19□□□□□ -1.26
PTPRE-202ENST00000306042 RHODO00212 210 aa7.18□□□□□ -1.26
PTPRE-202ENST00000306042 PHOX2AO14813 284 aa7.18□□□□□ -1.26
PTPRE-202ENST00000306042 AVPP01185 164 aa7.18□□□□□ -1.26
PTPRE-202ENST00000306042 ARMS2P0C7Q2 107 aa7.18□□□□□ -1.26
PTPRE-202ENST00000306042 MEIG1Q5JSS6 88 aa7.18□□□□□ -1.26
PTPRE-202ENST00000306042 LYZL1Q6UWQ5 148 aa7.18□□□□□ -1.26
PTPRE-202ENST00000306042 TMEM75Q8N9X5 138 aa7.18□□□□□ -1.26
PTPRE-202ENST00000306042 DERL1Q9BUN8 251 aa7.18□□□□□ -1.26
PTPRE-202ENST00000306042 TRAV9-1A0A075B6T8 112 aa7.18□□□□□ -1.26
PTPRE-202ENST00000306042 ADARB2-AS1A8MUL3 147 aa7.18□□□□□ -1.26
PTPRE-202ENST00000306042 F6UB75 175 aa7.18□□□□□ -1.26
PTPRE-202ENST00000306042 UTF1Q5T230 341 aa7.18□□□□□ -1.26
PTPRE-202ENST00000306042 TMEM70Q9BUB7 260 aa7.18□□□□□ -1.26
PTPRE-202ENST00000306042 FN1P02751 2386 aaKnown RBP7.18□□□□□ -1.26
PTPRE-202ENST00000306042 TNCP24821 2201 aa7.18□□□□□ -1.26
PTPRE-202ENST00000306042 APOHP02749 345 aaPredicted RBP7.18□□□□□ -1.26
PTPRE-202ENST00000306042 C14orf178Q8N769 122 aaPredicted RBP7.18□□□□□ -1.26
PTPRE-202ENST00000306042 EBI3Q14213 229 aa7.18□□□□□ -1.26
PTPRE-202ENST00000306042 LINC00479Q96M42 142 aa7.18□□□□□ -1.26
PTPRE-202ENST00000306042 ADAMTS20P59510 1910 aa7.18□□□□□ -1.26
PTPRE-202ENST00000306042 A0A087WWL8 130 aa7.17□□□□□ -1.26
PTPRE-202ENST00000306042 TMEM256Q8N2U0 113 aa7.17□□□□□ -1.26
PTPRE-202ENST00000306042 LY6LH3BQJ8 138 aa7.17□□□□□ -1.26
PTPRE-202ENST00000306042 C18orf15Q96N68 181 aa7.17□□□□□ -1.26
PTPRE-202ENST00000306042 H3BRM9 83 aa7.17□□□□□ -1.26
PTPRE-202ENST00000306042 IFITM2Q01629 132 aa7.17□□□□□ -1.26
PTPRE-202ENST00000306042 TMEM170BQ5T4T1 132 aa7.17□□□□□ -1.26
PTPRE-202ENST00000306042 ZNF414Q96IQ9 312 aa7.17□□□□□ -1.26
PTPRE-202ENST00000306042 SSBP4Q9BWG4 385 aaPredicted RBP7.17□□□□□ -1.26
PTPRE-202ENST00000306042 VCX2Q9H322 139 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms