RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 C16orf92Q96LL3 132 aa14.82□□□□□ -0.04
HOXC4-201ENST00000303406 ZNF702PQ9H963 129 aa14.82□□□□□ -0.04
HOXC4-201ENST00000303406 DAZ1Q9NQZ3 744 aaKnown RBP14.82□□□□□ -0.04
HOXC4-201ENST00000303406 LENEPQ9Y5L5 61 aa14.82□□□□□ -0.04
HOXC4-201ENST00000303406 FABP5P3A8MUU1 101 aa14.82□□□□□ -0.04
HOXC4-201ENST00000303406 F2Z2F3 143 aa14.82□□□□□ -0.04
HOXC4-201ENST00000303406 SOCS3O14543 225 aa14.82□□□□□ -0.04
HOXC4-201ENST00000303406 ZNF138P52744 262 aa14.82□□□□□ -0.04
HOXC4-201ENST00000303406 SAMD13Q5VXD3 122 aa14.82□□□□□ -0.04
HOXC4-201ENST00000303406 TMEM86BQ8N661 226 aa14.82□□□□□ -0.04
HOXC4-201ENST00000303406 Q8TAT8 98 aa14.82□□□□□ -0.04
HOXC4-201ENST00000303406 IQCJQ1A5X6 159 aa14.81□□□□□ -0.04
HOXC4-201ENST00000303406 TMEM78Q5T7P6 136 aa14.81□□□□□ -0.04
HOXC4-201ENST00000303406 Q8N2B8 174 aa14.81□□□□□ -0.04
HOXC4-201ENST00000303406 RNF152Q8N8N0 203 aa14.81□□□□□ -0.04
HOXC4-201ENST00000303406 SSBP4Q9BWG4 385 aaPredicted RBP14.81□□□□□ -0.04
HOXC4-201ENST00000303406 AGPAT4-IT1Q9H0P7 198 aa14.81□□□□□ -0.04
HOXC4-201ENST00000303406 VPS13CQ709C8 3753 aa14.8□□□□□ -0.04
HOXC4-201ENST00000303406 HOXA3O43365 443 aaPredicted RBP14.8□□□□□ -0.04
HOXC4-201ENST00000303406 GPX1P07203 203 aa14.8□□□□□ -0.04
HOXC4-201ENST00000303406 ZNF80P51504 273 aaPredicted RBP14.8□□□□□ -0.04
HOXC4-201ENST00000303406 HIST1H1AQ02539 215 aaPredicted RBP14.8□□□□□ -0.04
HOXC4-201ENST00000303406 ERCC8Q13216 396 aa14.8□□□□□ -0.04
HOXC4-201ENST00000303406 LINC01559Q495D7 138 aa14.8□□□□□ -0.04
HOXC4-201ENST00000303406 CDPF1Q6NVV7 123 aa14.8□□□□□ -0.04
HOXC4-201ENST00000303406 ZNF493Q6ZR52 646 aa14.8□□□□□ -0.04
HOXC4-201ENST00000303406 LCNL1Q6ZST4 164 aa14.8□□□□□ -0.04
HOXC4-201ENST00000303406 SAMD10Q9BYL1 202 aa14.8□□□□□ -0.04
HOXC4-201ENST00000303406 SMPXQ9UHP9 88 aa14.8□□□□□ -0.04
HOXC4-201ENST00000303406 UFC1Q9Y3C8 167 aa14.8□□□□□ -0.04
HOXC4-201ENST00000303406 LOC102724200A0A096LPH7 203 aaPredicted RBP14.79□□□□□ -0.04
HOXC4-201ENST00000303406 OVOL1O14753 267 aa14.79□□□□□ -0.04
HOXC4-201ENST00000303406 ARMS2P0C7Q2 107 aa14.79□□□□□ -0.04
HOXC4-201ENST00000303406 CTRLP40313 264 aa14.79□□□□□ -0.04
HOXC4-201ENST00000303406 NRN1Q9NPD7 142 aa14.79□□□□□ -0.04
HOXC4-201ENST00000303406 SIGLECL1Q8N7X8 197 aa14.78□□□□□ -0.04
HOXC4-201ENST00000303406 RHPN1-AS1Q9BWJ2 59 aa14.78□□□□□ -0.04
HOXC4-201ENST00000303406 ZNF324O75467 553 aaPredicted RBP14.77□□□□□ -0.04
HOXC4-201ENST00000303406 IGLC6P0CF74 106 aa14.77□□□□□ -0.04
HOXC4-201ENST00000303406 PRB4P10163 310 aaPredicted RBP14.77□□□□□ -0.04
HOXC4-201ENST00000303406 IL17RELQ6ZVW7 336 aa14.77□□□□□ -0.04
HOXC4-201ENST00000303406 REC114Q7Z4M0 266 aa14.77□□□□□ -0.04
HOXC4-201ENST00000303406 LINC00477Q96M19 166 aa14.77□□□□□ -0.04
HOXC4-201ENST00000303406 RCHY1Q96PM5 261 aa14.77□□□□□ -0.04
HOXC4-201ENST00000303406 UTP20O75691 2785 aaKnown RBP14.77□□□□□ -0.04
HOXC4-201ENST00000303406 LGALS1P09382 135 aaKnown RBP14.76□□□□□ -0.05
HOXC4-201ENST00000303406 TM4SF20Q53R12 229 aa14.76□□□□□ -0.05
HOXC4-201ENST00000303406 LYZL1Q6UWQ5 148 aa14.76□□□□□ -0.05
HOXC4-201ENST00000303406 Q6ZWC4 215 aa14.76□□□□□ -0.05
HOXC4-201ENST00000303406 ZNF738Q8NE65 137 aa14.76□□□□□ -0.05
HOXC4-201ENST00000303406 C20orf173Q96LM9 149 aa14.76□□□□□ -0.05
HOXC4-201ENST00000303406 UBE2E2Q96LR5 201 aa14.76□□□□□ -0.05
HOXC4-201ENST00000303406 CNFNQ9BYD5 112 aa14.76□□□□□ -0.05
HOXC4-201ENST00000303406 PTPN13Q12923 2485 aa14.76□□□□□ -0.05
HOXC4-201ENST00000303406 TRBV7-9A0A0J9YWB2 115 aa14.75□□□□□ -0.05
HOXC4-201ENST00000303406 AMTP48728 403 aa14.75□□□□□ -0.05
HOXC4-201ENST00000303406 FER1L6-AS1Q8NA97 138 aa14.75□□□□□ -0.05
HOXC4-201ENST00000303406 USP9YO00507 2555 aaPredicted RBP14.75□□□□□ -0.05
HOXC4-201ENST00000303406 LGALS9O00182 355 aa14.74□□□□□ -0.05
HOXC4-201ENST00000303406 RPLP1P05386 114 aaKnown RBP14.74□□□□□ -0.05
HOXC4-201ENST00000303406 PKIAP61925 76 aa14.74□□□□□ -0.05
HOXC4-201ENST00000303406 WFDC11Q8NEX6 87 aa14.74□□□□□ -0.05
HOXC4-201ENST00000303406 CHCHD1Q96BP2 118 aaKnown RBP14.74□□□□□ -0.05
HOXC4-201ENST00000303406 NAGKQ9UJ70 344 aa14.74□□□□□ -0.05
HOXC4-201ENST00000303406 SVEP1Q4LDE5 3571 aa14.74□□□□□ -0.05
HOXC4-201ENST00000303406 ZNF575Q86XF7 245 aa14.73□□□□□ -0.05
HOXC4-201ENST00000303406 OR10J6PQ8NGY7 276 aa14.73□□□□□ -0.05
HOXC4-201ENST00000303406 FOXC2Q99958 501 aa14.73□□□□□ -0.05
HOXC4-201ENST00000303406 CSPG4Q6UVK1 2322 aa14.73□□□□□ -0.05
HOXC4-201ENST00000303406 NAV2Q8IVL1 2488 aa14.73□□□□□ -0.05
HOXC4-201ENST00000303406 CSMD1Q96PZ7 3565 aa14.72□□□□□ -0.05
HOXC4-201ENST00000303406 TMSB15BA0A087X1C1 80 aa14.72□□□□□ -0.05
HOXC4-201ENST00000303406 ORM1P02763 201 aa14.72□□□□□ -0.05
HOXC4-201ENST00000303406 C10orf99Q6UWK7 81 aa14.72□□□□□ -0.05
HOXC4-201ENST00000303406 HSBP1O75506 76 aa14.71□□□□□ -0.05
HOXC4-201ENST00000303406 SCGB1D1O95968 90 aa14.71□□□□□ -0.05
HOXC4-201ENST00000303406 CRYBG3Q68DQ2 2970 aa14.71□□□□□ -0.05
HOXC4-201ENST00000303406 KMT2BQ9UMN6 2715 aaPredicted RBP14.71□□□□□ -0.05
HOXC4-201ENST00000303406 TMEM213A2RRL7 107 aa14.71□□□□□ -0.06
HOXC4-201ENST00000303406 TSTD3H0UI37 97 aa14.71□□□□□ -0.06
HOXC4-201ENST00000303406 RAB4AP20338 218 aa14.71□□□□□ -0.06
HOXC4-201ENST00000303406 PMCHP20382 165 aa14.71□□□□□ -0.06
HOXC4-201ENST00000303406 ID1P41134 155 aa14.71□□□□□ -0.06
HOXC4-201ENST00000303406 NIT1Q86X76 327 aa14.71□□□□□ -0.06
HOXC4-201ENST00000303406 FAM19A4Q96LR4 140 aa14.71□□□□□ -0.06
HOXC4-201ENST00000303406 TPPP3Q9BW30 176 aa14.71□□□□□ -0.06
HOXC4-201ENST00000303406 LINC00587B1AMM8 73 aa14.7□□□□□ -0.06
HOXC4-201ENST00000303406 FAM104BQ5XKR9 115 aa14.7□□□□□ -0.06
HOXC4-201ENST00000303406 APRG1Q8IVJ8 170 aa14.7□□□□□ -0.06
HOXC4-201ENST00000303406 U3KQK5 164 aa14.7□□□□□ -0.06
HOXC4-201ENST00000303406 OR8A1Q8NGG7 326 aa14.69□□□□□ -0.06
HOXC4-201ENST00000303406 URB1-AS1Q96HZ7 61 aa14.69□□□□□ -0.06
HOXC4-201ENST00000303406 CELSR2Q9HCU4 2923 aa14.69□□□□□ -0.06
HOXC4-201ENST00000303406 POLQO75417 2590 aa14.68□□□□□ -0.06
HOXC4-201ENST00000303406 IGKV3D-20A0A0C4DH25 116 aa14.68□□□□□ -0.06
HOXC4-201ENST00000303406 RPL11P62913 178 aaKnown RBP14.68□□□□□ -0.06
HOXC4-201ENST00000303406 RNASEKQ6P5S7 137 aaKnown RBP14.68□□□□□ -0.06
HOXC4-201ENST00000303406 TMEM191AQ9H0A3 160 aa14.68□□□□□ -0.06
HOXC4-201ENST00000303406 TEX43Q6ZNM6 134 aa14.67□□□□□ -0.06
HOXC4-201ENST00000303406 DCANP1Q8TF63 244 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms