RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 SMAGPQ0VAQ4 97 aa10.55□□□□□ -0.72
CASC4-201ENST00000299957 DGAT2L7PQ6IED9 249 aa10.55□□□□□ -0.72
CASC4-201ENST00000299957 NEGR1Q7Z3B1 354 aa10.55□□□□□ -0.72
CASC4-201ENST00000299957 DKK2Q9UBU2 259 aa10.55□□□□□ -0.72
CASC4-201ENST00000299957 CIDEAO60543 219 aa10.55□□□□□ -0.72
CASC4-201ENST00000299957 IGKV1-17P01599 117 aa10.55□□□□□ -0.72
CASC4-201ENST00000299957 ATP5J2P56134 94 aa10.55□□□□□ -0.72
CASC4-201ENST00000299957 TRAV40A0A0B4J280 105 aa10.55□□□□□ -0.72
CASC4-201ENST00000299957 RPS20P60866 119 aaKnown RBP10.55□□□□□ -0.72
CASC4-201ENST00000299957 FAM106AQ4KMX7 169 aa10.55□□□□□ -0.72
CASC4-201ENST00000299957 PCP2Q8IVA1 136 aa10.55□□□□□ -0.72
CASC4-201ENST00000299957 Q8N7P7 452 aa10.55□□□□□ -0.72
CASC4-201ENST00000299957 EEF1AKMT3Q96AZ1 226 aa10.55□□□□□ -0.72
CASC4-201ENST00000299957 MRPL16Q9NX20 251 aaKnown RBP10.55□□□□□ -0.72
CASC4-201ENST00000299957 ACANP16112 2415 aa10.55□□□□□ -0.72
CASC4-201ENST00000299957 IGKV3D-20A0A0C4DH25 116 aa10.54□□□□□ -0.72
CASC4-201ENST00000299957 K7ERJ3 54 aa10.54□□□□□ -0.72
CASC4-201ENST00000299957 ITGB1BP1O14713 200 aa10.54□□□□□ -0.72
CASC4-201ENST00000299957 IGLV2-8P01709 118 aa10.54□□□□□ -0.72
CASC4-201ENST00000299957 TTC9CQ8N5M4 171 aa10.54□□□□□ -0.72
CASC4-201ENST00000299957 SIGLEC8Q9NYZ4 499 aa10.54□□□□□ -0.72
CASC4-201ENST00000299957 POU2AF1Q16633 256 aa10.54□□□□□ -0.72
CASC4-201ENST00000299957 IL17RELQ6ZVW7 336 aa10.54□□□□□ -0.72
CASC4-201ENST00000299957 C11orf44Q8N8P7 122 aa10.54□□□□□ -0.72
CASC4-201ENST00000299957 IGF2BP2-AS1Q96M15 143 aa10.54□□□□□ -0.72
CASC4-201ENST00000299957 NUP37Q8NFH4 326 aa10.54□□□□□ -0.72
CASC4-201ENST00000299957 MRPS16Q9Y3D3 137 aaKnown RBP10.54□□□□□ -0.72
CASC4-201ENST00000299957 FNDC10F2Z333 226 aa10.53□□□□□ -0.72
CASC4-201ENST00000299957 MRPL51Q4U2R6 128 aaKnown RBP10.53□□□□□ -0.72
CASC4-201ENST00000299957 RUSC1-AS1Q66K80 236 aa10.53□□□□□ -0.72
CASC4-201ENST00000299957 A0A0U1RRA0 63 aa10.53□□□□□ -0.72
CASC4-201ENST00000299957 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.53□□□□□ -0.72
CASC4-201ENST00000299957 THBDP07204 575 aa10.53□□□□□ -0.72
CASC4-201ENST00000299957 EFNA4P52798 201 aa10.53□□□□□ -0.72
CASC4-201ENST00000299957 FAM159AQ6UWV7 190 aa10.53□□□□□ -0.72
CASC4-201ENST00000299957 ZNF491Q8N8L2 437 aa10.53□□□□□ -0.72
CASC4-201ENST00000299957 C1orf159Q96HA4 380 aa10.53□□□□□ -0.72
CASC4-201ENST00000299957 CST9LQ9H4G1 147 aa10.53□□□□□ -0.72
CASC4-201ENST00000299957 PRSS46E5RG02 174 aa10.53□□□□□ -0.72
CASC4-201ENST00000299957 LOXL1Q08397 574 aaPredicted RBP10.53□□□□□ -0.72
CASC4-201ENST00000299957 EIF4EBP1Q13541 118 aaPredicted RBP10.53□□□□□ -0.72
CASC4-201ENST00000299957 LINC00310P59036 64 aa10.52□□□□□ -0.72
CASC4-201ENST00000299957 ANKRD39Q53RE8 183 aa10.52□□□□□ -0.72
CASC4-201ENST00000299957 TEX36Q5VZQ5 186 aa10.52□□□□□ -0.72
CASC4-201ENST00000299957 RASL11AQ6T310 242 aa10.52□□□□□ -0.72
CASC4-201ENST00000299957 Q71RC1 249 aaPredicted RBP10.52□□□□□ -0.72
CASC4-201ENST00000299957 MAPK1IP1LQ8NDC0 245 aa10.52□□□□□ -0.72
CASC4-201ENST00000299957 GTSF1LQ9H1H1 148 aa10.52□□□□□ -0.72
CASC4-201ENST00000299957 IGHV3-73A0A0B4J1V6 119 aa10.52□□□□□ -0.73
CASC4-201ENST00000299957 IGKV3OR2-268A0A0C4DH90 116 aa10.52□□□□□ -0.73
CASC4-201ENST00000299957 Q6AWC8 147 aa10.52□□□□□ -0.73
CASC4-201ENST00000299957 BPESC1Q9GZL8 116 aa10.52□□□□□ -0.73
CASC4-201ENST00000299957 PSMB11A5LHX3 300 aa10.52□□□□□ -0.73
CASC4-201ENST00000299957 SAMD5Q5TGI4 173 aa10.52□□□□□ -0.73
CASC4-201ENST00000299957 FAM231DQ6ZW35 169 aa10.52□□□□□ -0.73
CASC4-201ENST00000299957 LINC00477Q96M19 166 aa10.52□□□□□ -0.73
CASC4-201ENST00000299957 C7orf69Q9H7B7 122 aa10.52□□□□□ -0.73
CASC4-201ENST00000299957 KALRNO60229 2985 aa10.52□□□□□ -0.73
CASC4-201ENST00000299957 CD7P09564 240 aa10.51□□□□□ -0.73
CASC4-201ENST00000299957 AMTNQ6UX39 209 aa10.51□□□□□ -0.73
CASC4-201ENST00000299957 DOPEY1Q5JWR5 2465 aa10.51□□□□□ -0.73
CASC4-201ENST00000299957 EPG5Q9HCE0 2579 aa10.51□□□□□ -0.73
CASC4-201ENST00000299957 ATP6V0E1O15342 81 aa10.51□□□□□ -0.73
CASC4-201ENST00000299957 IGKCP01834 107 aa10.51□□□□□ -0.73
CASC4-201ENST00000299957 SAA4P35542 130 aa10.51□□□□□ -0.73
CASC4-201ENST00000299957 BVES-AS1Q5T3Y7 98 aa10.51□□□□□ -0.73
CASC4-201ENST00000299957 IGKV1D-37A0A075B6S9 117 aa10.51□□□□□ -0.73
CASC4-201ENST00000299957 A0A087WWL8 130 aa10.51□□□□□ -0.73
CASC4-201ENST00000299957 DPM2O94777 84 aa10.51□□□□□ -0.73
CASC4-201ENST00000299957 EGR2P11161 476 aaPredicted RBP10.51□□□□□ -0.73
CASC4-201ENST00000299957 FAM104BQ5XKR9 115 aa10.51□□□□□ -0.73
CASC4-201ENST00000299957 DPF1Q92782 380 aa10.51□□□□□ -0.73
CASC4-201ENST00000299957 TNFRSF6BO95407 300 aa10.5□□□□□ -0.73
CASC4-201ENST00000299957 HERVK_113P61574 105 aa10.5□□□□□ -0.73
CASC4-201ENST00000299957 ZNF688P0C7X2 276 aa10.5□□□□□ -0.73
CASC4-201ENST00000299957 CGB3P0DN86 165 aa10.5□□□□□ -0.73
CASC4-201ENST00000299957 CGB7P0DN87 165 aa10.5□□□□□ -0.73
CASC4-201ENST00000299957 PRR25Q96S07 402 aa10.5□□□□□ -0.73
CASC4-201ENST00000299957 F6UB75 175 aa10.5□□□□□ -0.73
CASC4-201ENST00000299957 GP9P14770 177 aa10.5□□□□□ -0.73
CASC4-201ENST00000299957 ASIPP42127 132 aa10.5□□□□□ -0.73
CASC4-201ENST00000299957 SAP30O75446 220 aa10.5□□□□□ -0.73
CASC4-201ENST00000299957 OCIAD2Q56VL3 154 aa10.5□□□□□ -0.73
CASC4-201ENST00000299957 CLEC2AQ6UVW9 174 aa10.5□□□□□ -0.73
CASC4-201ENST00000299957 K7EP13 123 aa10.49□□□□□ -0.73
CASC4-201ENST00000299957 NEU4Q8WWR8 484 aaPredicted RBP10.49□□□□□ -0.73
CASC4-201ENST00000299957 TMEM8BA6NDV4 472 aa10.49□□□□□ -0.73
CASC4-201ENST00000299957 LTAP01374 205 aa10.49□□□□□ -0.73
CASC4-201ENST00000299957 NPC2P61916 151 aa10.49□□□□□ -0.73
CASC4-201ENST00000299957 ZNF479Q96JC4 524 aa10.49□□□□□ -0.73
CASC4-201ENST00000299957 ZNF747Q9BV97 191 aa10.49□□□□□ -0.73
CASC4-201ENST00000299957 MS4A6AQ9H2W1 248 aa10.49□□□□□ -0.73
CASC4-201ENST00000299957 FCN3O75636 299 aa10.48□□□□□ -0.73
CASC4-201ENST00000299957 ATP5LO75964 103 aa10.48□□□□□ -0.73
CASC4-201ENST00000299957 PAX8Q06710 450 aa10.48□□□□□ -0.73
CASC4-201ENST00000299957 C3orf36Q3SXR2 165 aa10.48□□□□□ -0.73
CASC4-201ENST00000299957 THAP8Q8NA92 274 aa10.48□□□□□ -0.73
CASC4-201ENST00000299957 TNFRSF14Q92956 283 aa10.48□□□□□ -0.73
CASC4-201ENST00000299957 TET2Q6N021 2002 aaPredicted RBP10.48□□□□□ -0.73
CASC4-201ENST00000299957 SHISA9B4DS77 424 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms