RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 OSTCQ9NRP0 149 aa13.92□□□□□ -0.18
SEC61A2-201ENST00000298428 K7EQG2 157 aa13.91□□□□□ -0.18
SEC61A2-201ENST00000298428 RBPMS2Q6ZRY4 209 aaKnown RBP13.91□□□□□ -0.18
SEC61A2-201ENST00000298428 SNRPD3P62318 126 aaKnown RBP13.91□□□□□ -0.18
SEC61A2-201ENST00000298428 DEFB114Q30KQ6 69 aa13.91□□□□□ -0.18
SEC61A2-201ENST00000298428 SAPCD1Q5SSQ6 148 aa13.91□□□□□ -0.18
SEC61A2-201ENST00000298428 TMEM78Q5T7P6 136 aa13.91□□□□□ -0.18
SEC61A2-201ENST00000298428 FAM231DQ6ZW35 169 aa13.91□□□□□ -0.18
SEC61A2-201ENST00000298428 FAM24BQ8N5W8 94 aa13.91□□□□□ -0.18
SEC61A2-201ENST00000298428 PRR25Q96S07 402 aa13.91□□□□□ -0.18
SEC61A2-201ENST00000298428 TMEM61Q8N0U2 210 aa13.9□□□□□ -0.18
SEC61A2-201ENST00000298428 ZC2HC1AQ96GY0 325 aa13.9□□□□□ -0.18
SEC61A2-201ENST00000298428 C8orf49Q96NF6 230 aa13.9□□□□□ -0.18
SEC61A2-201ENST00000298428 NDFIP1Q9BT67 221 aa13.9□□□□□ -0.18
SEC61A2-201ENST00000298428 AGPAT4-IT1Q9H0P7 198 aa13.9□□□□□ -0.18
SEC61A2-201ENST00000298428 SIGLEC8Q9NYZ4 499 aa13.9□□□□□ -0.18
SEC61A2-201ENST00000298428 V9GYV3 84 aa13.9□□□□□ -0.18
SEC61A2-201ENST00000298428 COLCA2A8K830 154 aa13.89□□□□□ -0.19
SEC61A2-201ENST00000298428 ZNF688P0C7X2 276 aa13.89□□□□□ -0.19
SEC61A2-201ENST00000298428 ELOBQ15370 118 aa13.89□□□□□ -0.19
SEC61A2-201ENST00000298428 LINC00322Q6ZN03 302 aaPredicted RBP13.89□□□□□ -0.19
SEC61A2-201ENST00000298428 C9orf47Q6ZRZ4 202 aa13.89□□□□□ -0.19
SEC61A2-201ENST00000298428 OR10J6PQ8NGY7 276 aa13.89□□□□□ -0.19
SEC61A2-201ENST00000298428 YPEL4Q96NS1 127 aa13.89□□□□□ -0.19
SEC61A2-201ENST00000298428 GPR61Q9BZJ8 451 aa13.89□□□□□ -0.19
SEC61A2-201ENST00000298428 ZNF492Q9P255 531 aa13.89□□□□□ -0.19
SEC61A2-201ENST00000298428 WNK1Q9H4A3 2382 aa13.89□□□□□ -0.19
SEC61A2-201ENST00000298428 PF4P02776 101 aa13.89□□□□□ -0.19
SEC61A2-201ENST00000298428 ZNF705DP0CH99 300 aaPredicted RBP13.89□□□□□ -0.19
SEC61A2-201ENST00000298428 ZNF705BP0CI00 300 aaPredicted RBP13.89□□□□□ -0.19
SEC61A2-201ENST00000298428 S100PP25815 95 aa13.89□□□□□ -0.19
SEC61A2-201ENST00000298428 DEFB1P60022 68 aa13.89□□□□□ -0.19
SEC61A2-201ENST00000298428 CD300EQ496F6 205 aaPredicted RBP13.89□□□□□ -0.19
SEC61A2-201ENST00000298428 PSMG4Q5JS54 123 aa13.89□□□□□ -0.19
SEC61A2-201ENST00000298428 NUDT10Q8NFP7 164 aa13.89□□□□□ -0.19
SEC61A2-201ENST00000298428 NUDT11Q96G61 164 aa13.89□□□□□ -0.19
SEC61A2-201ENST00000298428 CITED1Q99966 193 aa13.89□□□□□ -0.19
SEC61A2-201ENST00000298428 ZNF705GA8MUZ8 300 aaPredicted RBP13.88□□□□□ -0.19
SEC61A2-201ENST00000298428 CT45A10P0DMU9 189 aa13.88□□□□□ -0.19
SEC61A2-201ENST00000298428 ZNF138P52744 262 aa13.88□□□□□ -0.19
SEC61A2-201ENST00000298428 DAZAP1Q96EP5 407 aaKnown RBP13.88□□□□□ -0.19
SEC61A2-201ENST00000298428 MAST4O15021 2626 aa13.88□□□□□ -0.19
SEC61A2-201ENST00000298428 C19orf71A6NCJ1 209 aa13.87□□□□□ -0.19
SEC61A2-201ENST00000298428 F6UB75 175 aa13.87□□□□□ -0.19
SEC61A2-201ENST00000298428 PFN1P07737 140 aaKnown RBP13.87□□□□□ -0.19
SEC61A2-201ENST00000298428 OR8A1Q8NGG7 326 aa13.87□□□□□ -0.19
SEC61A2-201ENST00000298428 IMMP2LQ96T52 175 aa13.87□□□□□ -0.19
SEC61A2-201ENST00000298428 TRAV2A0A0B4J234 112 aa13.87□□□□□ -0.19
SEC61A2-201ENST00000298428 NPIPB6E9PJ23 425 aa13.87□□□□□ -0.19
SEC61A2-201ENST00000298428 GATCO43716 136 aaKnown RBP13.87□□□□□ -0.19
SEC61A2-201ENST00000298428 HIST1H1AQ02539 215 aaPredicted RBP13.87□□□□□ -0.19
SEC61A2-201ENST00000298428 KRTAP24-1Q3LI83 254 aa13.87□□□□□ -0.19
SEC61A2-201ENST00000298428 KCNIP4Q6PIL6 250 aa13.87□□□□□ -0.19
SEC61A2-201ENST00000298428 COX8CQ7Z4L0 72 aa13.87□□□□□ -0.19
SEC61A2-201ENST00000298428 TGIF2-C20orf24A0A0A6YYL0 155 aa13.86□□□□□ -0.19
SEC61A2-201ENST00000298428 SAP30O75446 220 aa13.86□□□□□ -0.19
SEC61A2-201ENST00000298428 P01737 135 aa13.86□□□□□ -0.19
SEC61A2-201ENST00000298428 LINC00477Q96M19 166 aa13.86□□□□□ -0.19
SEC61A2-201ENST00000298428 PPP1R14DQ9NXH3 145 aa13.86□□□□□ -0.19
SEC61A2-201ENST00000298428 IL36BQ9NZH7 164 aa13.86□□□□□ -0.19
SEC61A2-201ENST00000298428 SMUG1Q53HV7 270 aa13.85□□□□□ -0.19
SEC61A2-201ENST00000298428 TRAV25A0A0B4J276 109 aa13.84□□□□□ -0.19
SEC61A2-201ENST00000298428 CA1P00915 261 aaPredicted RBP13.84□□□□□ -0.19
SEC61A2-201ENST00000298428 CXCL1P09341 107 aa13.84□□□□□ -0.19
SEC61A2-201ENST00000298428 CRIP1P50238 77 aa13.84□□□□□ -0.19
SEC61A2-201ENST00000298428 FAM3BP58499 235 aaPredicted RBP13.84□□□□□ -0.19
SEC61A2-201ENST00000298428 SPAG8Q99932 426 aaPredicted RBP13.84□□□□□ -0.19
SEC61A2-201ENST00000298428 A0A1W2PPQ1 181 aa13.84□□□□□ -0.19
SEC61A2-201ENST00000298428 LINC00482Q8N8I6 264 aa13.84□□□□□ -0.19
SEC61A2-201ENST00000298428 RPP21Q9H633 154 aaKnown RBP13.84□□□□□ -0.19
SEC61A2-201ENST00000298428 LENEPQ9Y5L5 61 aa13.84□□□□□ -0.19
SEC61A2-201ENST00000298428 FAM162BQ5T6X4 162 aa13.83□□□□□ -0.2
SEC61A2-201ENST00000298428 PRIMA1Q86XR5 153 aa13.83□□□□□ -0.2
SEC61A2-201ENST00000298428 TRBV24-1A0A075B6N3 115 aa13.82□□□□□ -0.2
SEC61A2-201ENST00000298428 IZUMO1RA6ND01 250 aa13.82□□□□□ -0.2
SEC61A2-201ENST00000298428 OR4C46A6NHA9 309 aa13.82□□□□□ -0.2
SEC61A2-201ENST00000298428 GDF5OSQ5U4N7 250 aa13.82□□□□□ -0.2
SEC61A2-201ENST00000298428 SH2D1AO60880 128 aa13.82□□□□□ -0.2
SEC61A2-201ENST00000298428 RAB5AP20339 215 aa13.82□□□□□ -0.2
SEC61A2-201ENST00000298428 ZNF80P51504 273 aaPredicted RBP13.82□□□□□ -0.2
SEC61A2-201ENST00000298428 CT83Q5H943 113 aa13.82□□□□□ -0.2
SEC61A2-201ENST00000298428 OR4B1Q8NGF8 309 aa13.82□□□□□ -0.2
SEC61A2-201ENST00000298428 FAM210BQ96KR6 192 aa13.82□□□□□ -0.2
SEC61A2-201ENST00000298428 TENM1Q9UKZ4 2725 aa13.81□□□□□ -0.2
SEC61A2-201ENST00000298428 CD33P20138 364 aa13.81□□□□□ -0.2
SEC61A2-201ENST00000298428 EBLN2Q6P2I7 272 aa13.81□□□□□ -0.2
SEC61A2-201ENST00000298428 PYGO2Q9BRQ0 406 aa13.81□□□□□ -0.2
SEC61A2-201ENST00000298428 ZNF256Q9Y2P7 627 aaPredicted RBP13.81□□□□□ -0.2
SEC61A2-201ENST00000298428 TMA7Q9Y2S6 64 aaKnown RBP13.81□□□□□ -0.2
SEC61A2-201ENST00000298428 ATRQ13535 2644 aa13.81□□□□□ -0.2
SEC61A2-201ENST00000298428 A0A0J9YX75 114 aa13.8□□□□□ -0.2
SEC61A2-201ENST00000298428 SMIM27A0A1W2PRY6 76 aa13.8□□□□□ -0.2
SEC61A2-201ENST00000298428 TCL1AP56279 114 aa13.8□□□□□ -0.2
SEC61A2-201ENST00000298428 DEFB131AP59861 70 aa13.8□□□□□ -0.2
SEC61A2-201ENST00000298428 OR2D3Q8NGH3 330 aa13.8□□□□□ -0.2
SEC61A2-201ENST00000298428 TSKUQ8WUA8 353 aa13.8□□□□□ -0.2
SEC61A2-201ENST00000298428 IGLV1-51P01701 117 aa13.8□□□□□ -0.2
SEC61A2-201ENST00000298428 FOXI2Q6ZQN5 318 aa13.8□□□□□ -0.2
SEC61A2-201ENST00000298428 SAV1Q9H4B6 383 aaPredicted RBP13.8□□□□□ -0.2
SEC61A2-201ENST00000298428 A8MWL6 223 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms