RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 ERCC8Q13216 396 aa18.39■□□□□ 0.53
GTF2A1-201ENST00000298173 PPP1R14DQ9NXH3 145 aa18.39■□□□□ 0.53
GTF2A1-201ENST00000298173 ZFP30Q9Y2G7 519 aa18.39■□□□□ 0.53
GTF2A1-201ENST00000298173 VWFP04275 2813 aa18.39■□□□□ 0.53
GTF2A1-201ENST00000298173 B4DEV8 164 aa18.38■□□□□ 0.53
GTF2A1-201ENST00000298173 GCGP01275 180 aa18.38■□□□□ 0.53
GTF2A1-201ENST00000298173 DEFB1P60022 68 aa18.38■□□□□ 0.53
GTF2A1-201ENST00000298173 TMEM183AQ8IXX5 376 aa18.38■□□□□ 0.53
GTF2A1-201ENST00000298173 ISOC2Q96AB3 205 aa18.38■□□□□ 0.53
GTF2A1-201ENST00000298173 RHEBQ15382 184 aa18.38■□□□□ 0.53
GTF2A1-201ENST00000298173 PSMG4Q5JS54 123 aa18.38■□□□□ 0.53
GTF2A1-201ENST00000298173 OR8A1Q8NGG7 326 aa18.38■□□□□ 0.53
GTF2A1-201ENST00000298173 OR4C46A6NHA9 309 aa18.37■□□□□ 0.53
GTF2A1-201ENST00000298173 NHLRC2Q8NBF2 726 aa18.37■□□□□ 0.53
GTF2A1-201ENST00000298173 COL6A5A8TX70 2615 aa18.36■□□□□ 0.53
GTF2A1-201ENST00000298173 STAB1Q9NY15 2570 aa18.36■□□□□ 0.53
GTF2A1-201ENST00000298173 F6UB75 175 aa18.36■□□□□ 0.53
GTF2A1-201ENST00000298173 INSL3P51460 131 aa18.36■□□□□ 0.53
GTF2A1-201ENST00000298173 COX8CQ7Z4L0 72 aa18.36■□□□□ 0.53
GTF2A1-201ENST00000298173 PRR25Q96S07 402 aa18.36■□□□□ 0.53
GTF2A1-201ENST00000298173 TRRAPQ9Y4A5 3859 aa18.36■□□□□ 0.53
GTF2A1-201ENST00000298173 NPIPB6E9PJ23 425 aa18.35■□□□□ 0.53
GTF2A1-201ENST00000298173 ZNF705DP0CH99 300 aaPredicted RBP18.35■□□□□ 0.53
GTF2A1-201ENST00000298173 ZNF705BP0CI00 300 aaPredicted RBP18.35■□□□□ 0.53
GTF2A1-201ENST00000298173 OR5I1Q13606 314 aa18.35■□□□□ 0.53
GTF2A1-201ENST00000298173 LINC00477Q96M19 166 aa18.35■□□□□ 0.53
GTF2A1-201ENST00000298173 ASCL2Q99929 193 aa18.35■□□□□ 0.53
GTF2A1-201ENST00000298173 ZNF492Q9P255 531 aa18.35■□□□□ 0.53
GTF2A1-201ENST00000298173 SAPCD1Q5SSQ6 148 aa18.34■□□□□ 0.53
GTF2A1-201ENST00000298173 OR10J6PQ8NGY7 276 aa18.34■□□□□ 0.53
GTF2A1-201ENST00000298173 SCO1O75880 301 aa18.34■□□□□ 0.53
GTF2A1-201ENST00000298173 Q8TAT8 98 aa18.34■□□□□ 0.53
GTF2A1-201ENST00000298173 RPS10P5Q9NQ39 176 aa18.34■□□□□ 0.53
GTF2A1-201ENST00000298173 A0A087WWC5 75 aa18.33■□□□□ 0.52
GTF2A1-201ENST00000298173 ZNF138P52744 262 aa18.33■□□□□ 0.52
GTF2A1-201ENST00000298173 RNF212Q495C1 297 aa18.33■□□□□ 0.52
GTF2A1-201ENST00000298173 TMEM78Q5T7P6 136 aa18.33■□□□□ 0.52
GTF2A1-201ENST00000298173 C9orf66Q5T8R8 295 aa18.33■□□□□ 0.52
GTF2A1-201ENST00000298173 GDF5OSQ5U4N7 250 aa18.33■□□□□ 0.52
GTF2A1-201ENST00000298173 GPR61Q9BZJ8 451 aa18.33■□□□□ 0.52
GTF2A1-201ENST00000298173 MGST1P10620 155 aaKnown RBP18.32■□□□□ 0.52
GTF2A1-201ENST00000298173 MAP6D1Q9H9H5 199 aa18.32■□□□□ 0.52
GTF2A1-201ENST00000298173 A0A0J9YX75 114 aa18.31■□□□□ 0.52
GTF2A1-201ENST00000298173 DEFB131AP59861 70 aa18.31■□□□□ 0.52
GTF2A1-201ENST00000298173 BEAN1Q3B7T3 259 aa18.31■□□□□ 0.52
GTF2A1-201ENST00000298173 LURAP1LQ8IV03 231 aa18.31■□□□□ 0.52
GTF2A1-201ENST00000298173 SFRP2Q96HF1 295 aa18.31■□□□□ 0.52
GTF2A1-201ENST00000298173 C8orf49Q96NF6 230 aa18.31■□□□□ 0.52
GTF2A1-201ENST00000298173 SAV1Q9H4B6 383 aaPredicted RBP18.31■□□□□ 0.52
GTF2A1-201ENST00000298173 LENEPQ9Y5L5 61 aa18.31■□□□□ 0.52
GTF2A1-201ENST00000298173 CT45A10P0DMU9 189 aa18.31■□□□□ 0.52
GTF2A1-201ENST00000298173 CD33P20138 364 aa18.31■□□□□ 0.52
GTF2A1-201ENST00000298173 HIST1H1AQ02539 215 aaPredicted RBP18.31■□□□□ 0.52
GTF2A1-201ENST00000298173 LINC00322Q6ZN03 302 aaPredicted RBP18.31■□□□□ 0.52
GTF2A1-201ENST00000298173 FOXI2Q6ZQN5 318 aa18.31■□□□□ 0.52
GTF2A1-201ENST00000298173 ZC2HC1AQ96GY0 325 aa18.31■□□□□ 0.52
GTF2A1-201ENST00000298173 FAM19A4Q96LR4 140 aa18.31■□□□□ 0.52
GTF2A1-201ENST00000298173 MCRIP2Q9BUT9 160 aaKnown RBP18.31■□□□□ 0.52
GTF2A1-201ENST00000298173 TMEM242Q9NWH2 141 aa18.31■□□□□ 0.52
GTF2A1-201ENST00000298173 AGRNO00468 2067 aa18.31■□□□□ 0.52
GTF2A1-201ENST00000298173 MT-ND4LP03901 98 aa18.3■□□□□ 0.52
GTF2A1-201ENST00000298173 ODF3L2Q3SX64 289 aa18.29■□□□□ 0.52
GTF2A1-201ENST00000298173 FAM231DQ6ZW35 169 aa18.29■□□□□ 0.52
GTF2A1-201ENST00000298173 ANAPC16Q96DE5 110 aa18.29■□□□□ 0.52
GTF2A1-201ENST00000298173 CTDSP1Q9GZU7 261 aa18.29■□□□□ 0.52
GTF2A1-201ENST00000298173 BIN3Q9NQY0 253 aa18.29■□□□□ 0.52
GTF2A1-201ENST00000298173 NOTCH3Q9UM47 2321 aa18.29■□□□□ 0.52
GTF2A1-201ENST00000298173 CRIP1P50238 77 aa18.28■□□□□ 0.52
GTF2A1-201ENST00000298173 RNASE7Q9H1E1 156 aaKnown RBP18.28■□□□□ 0.52
GTF2A1-201ENST00000298173 OSTCQ9NRP0 149 aa18.28■□□□□ 0.52
GTF2A1-201ENST00000298173 TRBV7-9A0A0J9YWB2 115 aa18.28■□□□□ 0.52
GTF2A1-201ENST00000298173 C19orf71A6NCJ1 209 aa18.28■□□□□ 0.52
GTF2A1-201ENST00000298173 EBLN2Q6P2I7 272 aa18.28■□□□□ 0.52
GTF2A1-201ENST00000298173 NDFIP1Q9BT67 221 aa18.28■□□□□ 0.52
GTF2A1-201ENST00000298173 WIPF1O43516 503 aa18.27■□□□□ 0.52
GTF2A1-201ENST00000298173 ERVFC1-1P60608 527 aa18.27■□□□□ 0.52
GTF2A1-201ENST00000298173 OR10G8Q8NGN5 311 aa18.27■□□□□ 0.52
GTF2A1-201ENST00000298173 FAM110AQ9BQ89 295 aa18.27■□□□□ 0.52
GTF2A1-201ENST00000298173 CMC4P56277 68 aaPredicted RBP18.26■□□□□ 0.51
GTF2A1-201ENST00000298173 PRR27Q6MZM9 219 aa18.26■□□□□ 0.51
GTF2A1-201ENST00000298173 NUDT10Q8NFP7 164 aa18.26■□□□□ 0.51
GTF2A1-201ENST00000298173 NUDT11Q96G61 164 aa18.26■□□□□ 0.51
GTF2A1-201ENST00000298173 MDFIQ99750 246 aa18.26■□□□□ 0.51
GTF2A1-201ENST00000298173 A8MTW9 85 aa18.25■□□□□ 0.51
GTF2A1-201ENST00000298173 PPP1R2P9O14990 202 aa18.25■□□□□ 0.51
GTF2A1-201ENST00000298173 DUSP14O95147 198 aaKnown RBP18.25■□□□□ 0.51
GTF2A1-201ENST00000298173 ZNF124Q15973 351 aa18.25■□□□□ 0.51
GTF2A1-201ENST00000298173 IBA57Q5T440 356 aaKnown RBP18.25■□□□□ 0.51
GTF2A1-201ENST00000298173 C19orf73Q9NVV2 129 aa18.25■□□□□ 0.51
GTF2A1-201ENST00000298173 HLA-DRB4P13762 266 aa18.25■□□□□ 0.51
GTF2A1-201ENST00000298173 CRISP2P16562 243 aa18.25■□□□□ 0.51
GTF2A1-201ENST00000298173 ZNF80P51504 273 aaPredicted RBP18.25■□□□□ 0.51
GTF2A1-201ENST00000298173 SMUG1Q53HV7 270 aa18.25■□□□□ 0.51
GTF2A1-201ENST00000298173 ZFAND2AQ8N6M9 145 aa18.25■□□□□ 0.51
GTF2A1-201ENST00000298173 V9GYV3 84 aa18.25■□□□□ 0.51
GTF2A1-201ENST00000298173 HLA-DRB4X5D2U9 266 aa18.25■□□□□ 0.51
GTF2A1-201ENST00000298173 KNCNA6PVL3 124 aa18.24■□□□□ 0.51
GTF2A1-201ENST00000298173 H3BMM0 161 aa18.24■□□□□ 0.51
GTF2A1-201ENST00000298173 IGLL1P15814 213 aa18.24■□□□□ 0.51
GTF2A1-201ENST00000298173 TMEM88Q6PEY1 159 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms