RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 PLGLAQ15195 96 aa12.27□□□□□ -0.44
UBAP1-201ENST00000297661 K7ERJ3 54 aa12.27□□□□□ -0.45
UBAP1-201ENST00000297661 CRYGCP07315 174 aa12.27□□□□□ -0.45
UBAP1-201ENST00000297661 GP9P14770 177 aa12.27□□□□□ -0.45
UBAP1-201ENST00000297661 PRNTQ86SH4 94 aa12.27□□□□□ -0.45
UBAP1-201ENST00000297661 BCL6BQ8N143 479 aaPredicted RBP12.27□□□□□ -0.45
UBAP1-201ENST00000297661 ZNF414Q96IQ9 312 aa12.27□□□□□ -0.45
UBAP1-201ENST00000297661 SIGLEC8Q9NYZ4 499 aa12.27□□□□□ -0.45
UBAP1-201ENST00000297661 CKS1BP61024 79 aa12.26□□□□□ -0.45
UBAP1-201ENST00000297661 PPP1R27Q86WC6 154 aa12.26□□□□□ -0.45
UBAP1-201ENST00000297661 FAM90A27PA6NNH2 459 aa12.26□□□□□ -0.45
UBAP1-201ENST00000297661 TEX22C9J3V5 150 aa12.26□□□□□ -0.45
UBAP1-201ENST00000297661 BUB1B-PAK6H3BSN5 160 aa12.26□□□□□ -0.45
UBAP1-201ENST00000297661 J3QR89 54 aa12.26□□□□□ -0.45
UBAP1-201ENST00000297661 WFDC2Q14508 124 aa12.26□□□□□ -0.45
UBAP1-201ENST00000297661 TPPP3Q9BW30 176 aa12.26□□□□□ -0.45
UBAP1-201ENST00000297661 SPANXB1Q9NS25 103 aaPredicted RBP12.26□□□□□ -0.45
UBAP1-201ENST00000297661 KAAG1Q9UBP8 84 aa12.26□□□□□ -0.45
UBAP1-201ENST00000297661 WNK2Q9Y3S1 2297 aa12.26□□□□□ -0.45
UBAP1-201ENST00000297661 IGLV1-47P01700 117 aa12.25□□□□□ -0.45
UBAP1-201ENST00000297661 PLA2G2AP14555 144 aa12.25□□□□□ -0.45
UBAP1-201ENST00000297661 FOXI2Q6ZQN5 318 aa12.25□□□□□ -0.45
UBAP1-201ENST00000297661 C8orf31Q8N9H6 132 aa12.25□□□□□ -0.45
UBAP1-201ENST00000297661 RPEQ96AT9 228 aa12.25□□□□□ -0.45
UBAP1-201ENST00000297661 C17orf77Q96MU5 243 aa12.25□□□□□ -0.45
UBAP1-201ENST00000297661 TRGV9Q99603 122 aa12.25□□□□□ -0.45
UBAP1-201ENST00000297661 SPATA25Q9BR10 227 aa12.25□□□□□ -0.45
UBAP1-201ENST00000297661 ONECUT1Q9UBC0 465 aa12.25□□□□□ -0.45
UBAP1-201ENST00000297661 USP9YO00507 2555 aaPredicted RBP12.25□□□□□ -0.45
UBAP1-201ENST00000297661 D6R8Y8 96 aa12.25□□□□□ -0.45
UBAP1-201ENST00000297661 ADORA2A-AS1P86434 159 aa12.25□□□□□ -0.45
UBAP1-201ENST00000297661 AKAP6Q13023 2319 aa12.25□□□□□ -0.45
UBAP1-201ENST00000297661 KLF17Q5JT82 389 aaPredicted RBP12.25□□□□□ -0.45
UBAP1-201ENST00000297661 NBPF19A0A087WUL8 3843 aa12.25□□□□□ -0.45
UBAP1-201ENST00000297661 CRYGBP07316 175 aa12.24□□□□□ -0.45
UBAP1-201ENST00000297661 GATD1Q8NB37 220 aa12.24□□□□□ -0.45
UBAP1-201ENST00000297661 DOPEY1Q5JWR5 2465 aa12.24□□□□□ -0.45
UBAP1-201ENST00000297661 ZNF785A8K8V0 405 aa12.24□□□□□ -0.45
UBAP1-201ENST00000297661 CNIH1O95406 144 aa12.24□□□□□ -0.45
UBAP1-201ENST00000297661 GOLT1AQ6ZVE7 132 aa12.24□□□□□ -0.45
UBAP1-201ENST00000297661 DKK2Q9UBU2 259 aa12.24□□□□□ -0.45
UBAP1-201ENST00000297661 CSMD2Q7Z408 3487 aa12.24□□□□□ -0.45
UBAP1-201ENST00000297661 TRAV26-1A0A087WT03 109 aa12.24□□□□□ -0.45
UBAP1-201ENST00000297661 IGLV2-11P01706 119 aa12.24□□□□□ -0.45
UBAP1-201ENST00000297661 HBDP02042 147 aa12.24□□□□□ -0.45
UBAP1-201ENST00000297661 CD3EP07766 207 aa12.24□□□□□ -0.45
UBAP1-201ENST00000297661 SRSF1Q07955 248 aaKnown RBP eCLIP12.24□□□□□ -0.45
UBAP1-201ENST00000297661 C8orf46Q8TAG6 207 aa12.24□□□□□ -0.45
UBAP1-201ENST00000297661 IFI27L1Q96BM0 104 aa12.24□□□□□ -0.45
UBAP1-201ENST00000297661 HIGD1AQ9Y241 93 aa12.24□□□□□ -0.45
UBAP1-201ENST00000297661 SERTM2A0A1B0GWG4 89 aa12.23□□□□□ -0.45
UBAP1-201ENST00000297661 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.23□□□□□ -0.45
UBAP1-201ENST00000297661 PHLDA1Q8WV24 401 aaPredicted RBP12.23□□□□□ -0.45
UBAP1-201ENST00000297661 SH2D6Q7Z4S9 175 aa12.23□□□□□ -0.45
UBAP1-201ENST00000297661 SPAG8Q99932 426 aaPredicted RBP12.23□□□□□ -0.45
UBAP1-201ENST00000297661 TTTY13Q9BZ97 58 aa12.23□□□□□ -0.45
UBAP1-201ENST00000297661 NGBQ9NPG2 151 aa12.23□□□□□ -0.45
UBAP1-201ENST00000297661 HECTD1Q9ULT8 2610 aa12.22□□□□□ -0.45
UBAP1-201ENST00000297661 F8W1H4 67 aa12.22□□□□□ -0.45
UBAP1-201ENST00000297661 TIMM23O14925 209 aa12.22□□□□□ -0.45
UBAP1-201ENST00000297661 ETDBQ3ZM63 59 aa12.22□□□□□ -0.45
UBAP1-201ENST00000297661 WFDC3Q8IUB2 231 aa12.22□□□□□ -0.45
UBAP1-201ENST00000297661 PRELID3AQ96N28 172 aa12.22□□□□□ -0.45
UBAP1-201ENST00000297661 VKORC1Q9BQB6 163 aa12.22□□□□□ -0.45
UBAP1-201ENST00000297661 SLC25A39Q9BZJ4 359 aaPredicted RBP12.22□□□□□ -0.45
UBAP1-201ENST00000297661 NHP2Q9NX24 153 aaKnown RBP12.22□□□□□ -0.45
UBAP1-201ENST00000297661 A0A1B0GW15 77 aa12.22□□□□□ -0.45
UBAP1-201ENST00000297661 KLRD1Q13241 179 aa12.22□□□□□ -0.45
UBAP1-201ENST00000297661 IGKV2D-26A0A0A0MRZ7 120 aa12.21□□□□□ -0.45
UBAP1-201ENST00000297661 CRYBA4P53673 196 aa12.21□□□□□ -0.45
UBAP1-201ENST00000297661 ARPC1AQ92747 370 aa12.21□□□□□ -0.45
UBAP1-201ENST00000297661 RASL11BQ9BPW5 248 aa12.21□□□□□ -0.45
UBAP1-201ENST00000297661 CHAC1Q9BUX1 264 aa12.21□□□□□ -0.45
UBAP1-201ENST00000297661 K7EMI3 77 aa12.21□□□□□ -0.46
UBAP1-201ENST00000297661 OTORQ9NRC9 128 aa12.21□□□□□ -0.46
UBAP1-201ENST00000297661 CELSR2Q9HCU4 2923 aa12.21□□□□□ -0.46
UBAP1-201ENST00000297661 B9A039 149 aa12.2□□□□□ -0.46
UBAP1-201ENST00000297661 I3L2K1 104 aa12.2□□□□□ -0.46
UBAP1-201ENST00000297661 J3QKU1 62 aa12.2□□□□□ -0.46
UBAP1-201ENST00000297661 NDUFS7O75251 213 aa12.2□□□□□ -0.46
UBAP1-201ENST00000297661 IGKV1-17P01599 117 aa12.2□□□□□ -0.46
UBAP1-201ENST00000297661 CT45A10P0DMU9 189 aa12.2□□□□□ -0.46
UBAP1-201ENST00000297661 TCTEX1D4Q5JR98 221 aa12.2□□□□□ -0.46
UBAP1-201ENST00000297661 AMN1Q8IY45 258 aa12.2□□□□□ -0.46
UBAP1-201ENST00000297661 HIGD1BQ9P298 99 aa12.2□□□□□ -0.46
UBAP1-201ENST00000297661 ZNF493Q6ZR52 646 aa12.2□□□□□ -0.46
UBAP1-201ENST00000297661 E9PLD3 99 aa12.19□□□□□ -0.46
UBAP1-201ENST00000297661 H3BMG7 143 aa12.19□□□□□ -0.46
UBAP1-201ENST00000297661 K7EQM0 130 aa12.19□□□□□ -0.46
UBAP1-201ENST00000297661 PAX8Q06710 450 aa12.19□□□□□ -0.46
UBAP1-201ENST00000297661 PVRIGQ6DKI7 326 aa12.19□□□□□ -0.46
UBAP1-201ENST00000297661 ORMDL3Q8N138 153 aa12.19□□□□□ -0.46
UBAP1-201ENST00000297661 TMEM213A2RRL7 107 aa12.19□□□□□ -0.46
UBAP1-201ENST00000297661 ATP5G2Q06055 141 aa12.19□□□□□ -0.46
UBAP1-201ENST00000297661 ZNF672Q499Z4 452 aaPredicted RBP12.19□□□□□ -0.46
UBAP1-201ENST00000297661 PTPN13Q12923 2485 aa12.19□□□□□ -0.46
UBAP1-201ENST00000297661 IGHV3-23P01764 117 aa12.18□□□□□ -0.46
UBAP1-201ENST00000297661 FAM104BQ5XKR9 115 aa12.18□□□□□ -0.46
UBAP1-201ENST00000297661 U3KQK5 164 aa12.18□□□□□ -0.46
UBAP1-201ENST00000297661 ZFHX3Q15911 3703 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms