RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 IBA57Q5T440 356 aaKnown RBP10.9□□□□□ -0.66
TMEM41A-201ENST00000296254 UQCC1Q9NVA1 299 aa10.9□□□□□ -0.66
TMEM41A-201ENST00000296254 CCSO14618 274 aa10.89□□□□□ -0.67
TMEM41A-201ENST00000296254 PAX4O43316 350 aa10.89□□□□□ -0.67
TMEM41A-201ENST00000296254 CST7O76096 145 aa10.89□□□□□ -0.67
TMEM41A-201ENST00000296254 NDUFB4O95168 129 aa10.89□□□□□ -0.67
TMEM41A-201ENST00000296254 CRISP2P16562 243 aa10.89□□□□□ -0.67
TMEM41A-201ENST00000296254 CAV2P51636 162 aa10.89□□□□□ -0.67
TMEM41A-201ENST00000296254 PDE6HQ13956 83 aa10.89□□□□□ -0.67
TMEM41A-201ENST00000296254 VWC2Q2TAL6 325 aa10.89□□□□□ -0.67
TMEM41A-201ENST00000296254 LINC00477Q96M19 166 aa10.89□□□□□ -0.67
TMEM41A-201ENST00000296254 C11orf1Q9H5F2 150 aa10.89□□□□□ -0.67
TMEM41A-201ENST00000296254 SLC39A9Q9NUM3 307 aa10.89□□□□□ -0.67
TMEM41A-201ENST00000296254 TMEM14CQ9P0S9 112 aa10.89□□□□□ -0.67
TMEM41A-201ENST00000296254 PRO0255Q9UI72 69 aa10.89□□□□□ -0.67
TMEM41A-201ENST00000296254 PRELID1Q9Y255 219 aa10.89□□□□□ -0.67
TMEM41A-201ENST00000296254 UBE2L5PA0A1B0GUS4 154 aa10.88□□□□□ -0.67
TMEM41A-201ENST00000296254 CCDC160A6NGH7 325 aa10.88□□□□□ -0.67
TMEM41A-201ENST00000296254 CENPXA8MT69 81 aa10.88□□□□□ -0.67
TMEM41A-201ENST00000296254 MPDU1O75352 247 aa10.88□□□□□ -0.67
TMEM41A-201ENST00000296254 IGHV3-53P01767 116 aa10.88□□□□□ -0.67
TMEM41A-201ENST00000296254 DNAH10OSP0CZ25 163 aa10.88□□□□□ -0.67
TMEM41A-201ENST00000296254 INAFM2P0DMQ5 153 aa10.88□□□□□ -0.67
TMEM41A-201ENST00000296254 RNASE4P34096 147 aaKnown RBP10.88□□□□□ -0.67
TMEM41A-201ENST00000296254 RPL29P47914 159 aaKnown RBP10.88□□□□□ -0.67
TMEM41A-201ENST00000296254 BCAP31P51572 246 aa10.88□□□□□ -0.67
TMEM41A-201ENST00000296254 ZNF846Q147U1 533 aa10.88□□□□□ -0.67
TMEM41A-201ENST00000296254 Q5VSD8 79 aa10.88□□□□□ -0.67
TMEM41A-201ENST00000296254 NFE4Q86UQ8 179 aa10.88□□□□□ -0.67
TMEM41A-201ENST00000296254 SDHCQ99643 169 aaPredicted RBP10.88□□□□□ -0.67
TMEM41A-201ENST00000296254 VGLL1Q99990 258 aa10.88□□□□□ -0.67
TMEM41A-201ENST00000296254 AGPAT4-IT1Q9H0P7 198 aa10.88□□□□□ -0.67
TMEM41A-201ENST00000296254 MRPL16Q9NX20 251 aaKnown RBP10.88□□□□□ -0.67
TMEM41A-201ENST00000296254 LSM5Q9Y4Y9 91 aaKnown RBP10.88□□□□□ -0.67
TMEM41A-201ENST00000296254 TNFRSF18Q9Y5U5 241 aa10.88□□□□□ -0.67
TMEM41A-201ENST00000296254 A0A087WTM6 91 aa10.87□□□□□ -0.67
TMEM41A-201ENST00000296254 NMBP08949 121 aa10.87□□□□□ -0.67
TMEM41A-201ENST00000296254 HIST1H1EP10412 219 aaKnown RBP10.87□□□□□ -0.67
TMEM41A-201ENST00000296254 CRYBA4P53673 196 aa10.87□□□□□ -0.67
TMEM41A-201ENST00000296254 PRR9Q5T870 116 aa10.87□□□□□ -0.67
TMEM41A-201ENST00000296254 C9orf47Q6ZRZ4 202 aa10.87□□□□□ -0.67
TMEM41A-201ENST00000296254 C12orf45Q8N5I9 185 aaPredicted RBP10.87□□□□□ -0.67
TMEM41A-201ENST00000296254 ZFAND2AQ8N6M9 145 aa10.87□□□□□ -0.67
TMEM41A-201ENST00000296254 RBM38Q9H0Z9 239 aaKnown RBP10.87□□□□□ -0.67
TMEM41A-201ENST00000296254 C20orf85Q9H1P6 137 aa10.87□□□□□ -0.67
TMEM41A-201ENST00000296254 TP53TG3Q9ULZ0 132 aa10.87□□□□□ -0.67
TMEM41A-201ENST00000296254 IGKV2-40A0A087WW87 121 aaPredicted RBP10.86□□□□□ -0.67
TMEM41A-201ENST00000296254 FAM24AA6NFZ4 105 aa10.86□□□□□ -0.67
TMEM41A-201ENST00000296254 RGS13O14921 159 aa10.86□□□□□ -0.67
TMEM41A-201ENST00000296254 IGKV2D-40P01614 121 aaPredicted RBP10.86□□□□□ -0.67
TMEM41A-201ENST00000296254 GPX1P07203 203 aa10.86□□□□□ -0.67
TMEM41A-201ENST00000296254 PYYP10082 97 aa10.86□□□□□ -0.67
TMEM41A-201ENST00000296254 KRTAP10-1P60331 282 aa10.86□□□□□ -0.67
TMEM41A-201ENST00000296254 BAXQ07812 192 aa10.86□□□□□ -0.67
TMEM41A-201ENST00000296254 SLAQ13239 276 aa10.86□□□□□ -0.67
TMEM41A-201ENST00000296254 LYPD5Q6UWN5 251 aa10.86□□□□□ -0.67
TMEM41A-201ENST00000296254 EXOC3-AS1Q8N2X6 119 aa10.86□□□□□ -0.67
TMEM41A-201ENST00000296254 CHAC2Q8WUX2 184 aa10.86□□□□□ -0.67
TMEM41A-201ENST00000296254 FRZBQ92765 325 aa10.86□□□□□ -0.67
TMEM41A-201ENST00000296254 TIMM9Q9Y5J7 89 aa10.86□□□□□ -0.67
TMEM41A-201ENST00000296254 IGHV1OR15-1A0A075B7D0 117 aa10.85□□□□□ -0.67
TMEM41A-201ENST00000296254 FAM25EA8MYX2 175 aa10.85□□□□□ -0.67
TMEM41A-201ENST00000296254 SULT1A1P50225 295 aa10.85□□□□□ -0.67
TMEM41A-201ENST00000296254 FHL2Q14192 279 aa10.85□□□□□ -0.67
TMEM41A-201ENST00000296254 MRPL23Q16540 153 aaKnown RBP10.85□□□□□ -0.67
TMEM41A-201ENST00000296254 CNPY1Q3B7I2 92 aa10.85□□□□□ -0.67
TMEM41A-201ENST00000296254 TMEM78Q5T7P6 136 aa10.85□□□□□ -0.67
TMEM41A-201ENST00000296254 BLNKQ8WV28 456 aa10.85□□□□□ -0.67
TMEM41A-201ENST00000296254 C8orf49Q96NF6 230 aa10.85□□□□□ -0.67
TMEM41A-201ENST00000296254 ARPC5LQ9BPX5 153 aa10.85□□□□□ -0.67
TMEM41A-201ENST00000296254 AAMDCQ9H7C9 122 aa10.85□□□□□ -0.67
TMEM41A-201ENST00000296254 LYRM2Q9NU23 88 aaPredicted RBP10.85□□□□□ -0.67
TMEM41A-201ENST00000296254 HHLA3Q9XRX5 114 aa10.85□□□□□ -0.67
TMEM41A-201ENST00000296254 LY96Q9Y6Y9 160 aa10.85□□□□□ -0.67
TMEM41A-201ENST00000296254 IL7P13232 177 aa10.84□□□□□ -0.67
TMEM41A-201ENST00000296254 FGF7P21781 194 aa10.84□□□□□ -0.67
TMEM41A-201ENST00000296254 S100A11P31949 105 aa10.84□□□□□ -0.67
TMEM41A-201ENST00000296254 Q6ZQT7 251 aa10.84□□□□□ -0.67
TMEM41A-201ENST00000296254 NEGR1Q7Z3B1 354 aa10.84□□□□□ -0.67
TMEM41A-201ENST00000296254 TRAV9-2A0A087WT02 112 aa10.83□□□□□ -0.68
TMEM41A-201ENST00000296254 IGSF23A1L1A6 192 aa10.83□□□□□ -0.68
TMEM41A-201ENST00000296254 K7EP13 123 aa10.83□□□□□ -0.68
TMEM41A-201ENST00000296254 PRAF2O60831 178 aa10.83□□□□□ -0.68
TMEM41A-201ENST00000296254 IFNA5P01569 189 aa10.83□□□□□ -0.68
TMEM41A-201ENST00000296254 PVALBP20472 110 aaPredicted RBP10.83□□□□□ -0.68
TMEM41A-201ENST00000296254 HBG1P69891 147 aa10.83□□□□□ -0.68
TMEM41A-201ENST00000296254 HBG2P69892 147 aa10.83□□□□□ -0.68
TMEM41A-201ENST00000296254 ZNF415Q09FC8 603 aa10.83□□□□□ -0.68
TMEM41A-201ENST00000296254 ICAM4Q14773 271 aa10.83□□□□□ -0.68
TMEM41A-201ENST00000296254 GCSAMLQ5JQS6 135 aa10.83□□□□□ -0.68
TMEM41A-201ENST00000296254 FAM122CQ6P4D5 195 aa10.83□□□□□ -0.68
TMEM41A-201ENST00000296254 STX12Q86Y82 276 aa10.83□□□□□ -0.68
TMEM41A-201ENST00000296254 SLC25A2Q9BXI2 301 aa10.83□□□□□ -0.68
TMEM41A-201ENST00000296254 ZNF492Q9P255 531 aa10.83□□□□□ -0.68
TMEM41A-201ENST00000296254 SRRM2Q9UQ35 2752 aaKnown RBP10.83□□□□□ -0.68
TMEM41A-201ENST00000296254 FLG2Q5D862 2391 aaPredicted RBP10.82□□□□□ -0.68
TMEM41A-201ENST00000296254 C5orf51A6NDU8 294 aa10.82□□□□□ -0.68
TMEM41A-201ENST00000296254 S100A10P60903 97 aa10.82□□□□□ -0.68
TMEM41A-201ENST00000296254 WFDC10BQ8IUB3 73 aa10.82□□□□□ -0.68
TMEM41A-201ENST00000296254 TMEM252Q8N6L7 170 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms