RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 HIST1H1EP10412 219 aaKnown RBP13.55□□□□□ -0.24
CXCL3-201ENST00000296026 IL15RAQ13261 267 aa13.55□□□□□ -0.24
CXCL3-201ENST00000296026 ATP6V1FQ16864 119 aa13.55□□□□□ -0.24
CXCL3-201ENST00000296026 MAPKAPK5-AS1Q8N8E1 139 aa13.55□□□□□ -0.24
CXCL3-201ENST00000296026 C11orf72Q8NBR9 251 aa13.55□□□□□ -0.24
CXCL3-201ENST00000296026 ZNF680Q8NEM1 530 aa13.55□□□□□ -0.24
CXCL3-201ENST00000296026 LINC00477Q96M19 166 aa13.55□□□□□ -0.24
CXCL3-201ENST00000296026 AGPAT4-IT1Q9H0P7 198 aa13.55□□□□□ -0.24
CXCL3-201ENST00000296026 PRELID1Q9Y255 219 aa13.55□□□□□ -0.24
CXCL3-201ENST00000296026 A0A1W2PPQ1 181 aa13.54□□□□□ -0.24
CXCL3-201ENST00000296026 ZNF324O75467 553 aaPredicted RBP13.54□□□□□ -0.24
CXCL3-201ENST00000296026 CD300CQ08708 224 aa13.54□□□□□ -0.24
CXCL3-201ENST00000296026 BTN1A1Q13410 526 aa13.54□□□□□ -0.24
CXCL3-201ENST00000296026 PDE6HQ13956 83 aa13.54□□□□□ -0.24
CXCL3-201ENST00000296026 EXOC3-AS1Q8N2X6 119 aa13.54□□□□□ -0.24
CXCL3-201ENST00000296026 EIF4E3Q8N5X7 224 aaKnown RBP13.54□□□□□ -0.24
CXCL3-201ENST00000296026 BLNKQ8WV28 456 aa13.54□□□□□ -0.24
CXCL3-201ENST00000296026 VSIG2Q96IQ7 327 aa13.54□□□□□ -0.24
CXCL3-201ENST00000296026 FAM19A4Q96LR4 140 aa13.54□□□□□ -0.24
CXCL3-201ENST00000296026 GPN1Q9HCN4 374 aaPredicted RBP13.54□□□□□ -0.24
CXCL3-201ENST00000296026 A0A096LPF7 62 aa13.53□□□□□ -0.24
CXCL3-201ENST00000296026 TRGV1A0A0A0MS02 117 aa13.53□□□□□ -0.24
CXCL3-201ENST00000296026 RNASE4P34096 147 aaKnown RBP13.53□□□□□ -0.24
CXCL3-201ENST00000296026 ANXA2RQ3ZCQ2 193 aa13.53□□□□□ -0.24
CXCL3-201ENST00000296026 GCSAMLQ5JQS6 135 aa13.53□□□□□ -0.24
CXCL3-201ENST00000296026 C18orf15Q96N68 181 aa13.53□□□□□ -0.24
CXCL3-201ENST00000296026 LINC00467Q9BRT7 94 aa13.53□□□□□ -0.24
CXCL3-201ENST00000296026 FUT9Q9Y231 359 aa13.53□□□□□ -0.24
CXCL3-201ENST00000296026 MPDU1O75352 247 aa13.52□□□□□ -0.25
CXCL3-201ENST00000296026 GPX1P07203 203 aa13.52□□□□□ -0.25
CXCL3-201ENST00000296026 NPCDR1Q9BY65 106 aa13.52□□□□□ -0.25
CXCL3-201ENST00000296026 AAMDCQ9H7C9 122 aa13.52□□□□□ -0.25
CXCL3-201ENST00000296026 KLF12Q9Y4X4 402 aa13.52□□□□□ -0.25
CXCL3-201ENST00000296026 ICAM4Q14773 271 aa13.51□□□□□ -0.25
CXCL3-201ENST00000296026 C9orf47Q6ZRZ4 202 aa13.51□□□□□ -0.25
CXCL3-201ENST00000296026 SLC25A2Q9BXI2 301 aa13.51□□□□□ -0.25
CXCL3-201ENST00000296026 HSPG2P98160 4391 aa13.5□□□□□ -0.25
CXCL3-201ENST00000296026 IGKV2-40A0A087WW87 121 aaPredicted RBP13.5□□□□□ -0.25
CXCL3-201ENST00000296026 FAM240BA0A1B0GVZ2 78 aa13.5□□□□□ -0.25
CXCL3-201ENST00000296026 SPINK4O60575 86 aa13.5□□□□□ -0.25
CXCL3-201ENST00000296026 IGKV2D-40P01614 121 aaPredicted RBP13.5□□□□□ -0.25
CXCL3-201ENST00000296026 CRISP2P16562 243 aa13.5□□□□□ -0.25
CXCL3-201ENST00000296026 BTF3P20290 206 aaKnown RBP13.5□□□□□ -0.25
CXCL3-201ENST00000296026 TCL1AP56279 114 aa13.5□□□□□ -0.25
CXCL3-201ENST00000296026 FAM122CQ6P4D5 195 aa13.5□□□□□ -0.25
CXCL3-201ENST00000296026 CCDC32Q9BV29 185 aa13.5□□□□□ -0.25
CXCL3-201ENST00000296026 NMBP08949 121 aa13.49□□□□□ -0.25
CXCL3-201ENST00000296026 KRTAP10-2P60368 255 aa13.49□□□□□ -0.25
CXCL3-201ENST00000296026 NHLH2Q02577 135 aa13.49□□□□□ -0.25
CXCL3-201ENST00000296026 TMEM78Q5T7P6 136 aa13.49□□□□□ -0.25
CXCL3-201ENST00000296026 ZFAND2AQ8N6M9 145 aa13.49□□□□□ -0.25
CXCL3-201ENST00000296026 THAP6Q8TBB0 222 aa13.49□□□□□ -0.25
CXCL3-201ENST00000296026 VGLL1Q99990 258 aa13.49□□□□□ -0.25
CXCL3-201ENST00000296026 RGS13O14921 159 aa13.48□□□□□ -0.25
CXCL3-201ENST00000296026 NBEAP1P0C6P0 100 aa13.48□□□□□ -0.25
CXCL3-201ENST00000296026 IBA57Q5T440 356 aaKnown RBP13.48□□□□□ -0.25
CXCL3-201ENST00000296026 PRR9Q5T870 116 aa13.48□□□□□ -0.25
CXCL3-201ENST00000296026 MIR17HGQ75NE6 70 aa13.48□□□□□ -0.25
CXCL3-201ENST00000296026 OR5C1Q8NGR4 320 aa13.48□□□□□ -0.25
CXCL3-201ENST00000296026 FAM167A-AS1Q96KT0 104 aa13.48□□□□□ -0.25
CXCL3-201ENST00000296026 NDUFA13Q9P0J0 144 aa13.48□□□□□ -0.25
CXCL3-201ENST00000296026 TP53TG3Q9ULZ0 132 aa13.48□□□□□ -0.25
CXCL3-201ENST00000296026 LINC00315P59091 139 aa13.47□□□□□ -0.25
CXCL3-201ENST00000296026 Q6ZQT7 251 aa13.47□□□□□ -0.25
CXCL3-201ENST00000296026 Q8N1X5 172 aa13.47□□□□□ -0.25
CXCL3-201ENST00000296026 ST6GAL2Q96JF0 529 aa13.47□□□□□ -0.25
CXCL3-201ENST00000296026 OR51M1Q9H341 326 aa13.47□□□□□ -0.25
CXCL3-201ENST00000296026 MRPL16Q9NX20 251 aaKnown RBP13.47□□□□□ -0.25
CXCL3-201ENST00000296026 ZNF492Q9P255 531 aa13.47□□□□□ -0.25
CXCL3-201ENST00000296026 IGHV1OR15-1A0A075B7D0 117 aa13.46□□□□□ -0.25
CXCL3-201ENST00000296026 SIVA1O15304 175 aa13.46□□□□□ -0.25
CXCL3-201ENST00000296026 PAX4O43316 350 aa13.46□□□□□ -0.25
CXCL3-201ENST00000296026 IGHV3-53P01767 116 aa13.46□□□□□ -0.25
CXCL3-201ENST00000296026 MZT2BQ6NZ67 158 aa13.46□□□□□ -0.25
CXCL3-201ENST00000296026 ICOSQ9Y6W8 199 aa13.46□□□□□ -0.25
CXCL3-201ENST00000296026 LRP1BQ9NZR2 4599 aa13.45□□□□□ -0.26
CXCL3-201ENST00000296026 SIX6O95475 246 aa13.45□□□□□ -0.26
CXCL3-201ENST00000296026 OR10J4P0C629 311 aa13.45□□□□□ -0.26
CXCL3-201ENST00000296026 ARPC5LQ9BPX5 153 aa13.45□□□□□ -0.26
CXCL3-201ENST00000296026 SLC25A31Q9H0C2 315 aa13.45□□□□□ -0.26
CXCL3-201ENST00000296026 E5RGE8 158 aa13.44□□□□□ -0.26
CXCL3-201ENST00000296026 NXPH4O95158 308 aa13.44□□□□□ -0.26
CXCL3-201ENST00000296026 ZNF138P52744 262 aa13.44□□□□□ -0.26
CXCL3-201ENST00000296026 Q8TAT8 98 aa13.44□□□□□ -0.26
CXCL3-201ENST00000296026 FXYD5Q96DB9 178 aa13.44□□□□□ -0.26
CXCL3-201ENST00000296026 PAXXQ9BUH6 204 aa13.44□□□□□ -0.26
CXCL3-201ENST00000296026 MRPL32Q9BYC8 188 aaKnown RBP13.44□□□□□ -0.26
CXCL3-201ENST00000296026 SCRT2Q9NQ03 307 aa13.44□□□□□ -0.26
CXCL3-201ENST00000296026 OR5AC2Q9NZP5 309 aa13.44□□□□□ -0.26
CXCL3-201ENST00000296026 PRO0255Q9UI72 69 aa13.44□□□□□ -0.26
CXCL3-201ENST00000296026 LRRC37A5PQ49AS3 106 aa13.43□□□□□ -0.26
CXCL3-201ENST00000296026 Q6ZRN7 208 aaPredicted RBP13.43□□□□□ -0.26
CXCL3-201ENST00000296026 PHYHIPLQ96FC7 376 aa13.43□□□□□ -0.26
CXCL3-201ENST00000296026 WDR61Q9GZS3 305 aaKnown RBP13.43□□□□□ -0.26
CXCL3-201ENST00000296026 KCNIP2Q9NS61 270 aa13.43□□□□□ -0.26
CXCL3-201ENST00000296026 CRYBA4P53673 196 aa13.42□□□□□ -0.26
CXCL3-201ENST00000296026 ZNF415Q09FC8 603 aa13.42□□□□□ -0.26
CXCL3-201ENST00000296026 SLAQ13239 276 aa13.42□□□□□ -0.26
CXCL3-201ENST00000296026 ASAH1Q13510 395 aa13.42□□□□□ -0.26
CXCL3-201ENST00000296026 C8orf49Q96NF6 230 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms