RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 MRPL32Q9BYC8 188 aaKnown RBP10.49□□□□□ -0.73
KCNIP3-201ENST00000295225 C7orf69Q9H7B7 122 aa10.49□□□□□ -0.73
KCNIP3-201ENST00000295225 NUDT3O95989 172 aa10.48□□□□□ -0.73
KCNIP3-201ENST00000295225 P01737 135 aa10.48□□□□□ -0.73
KCNIP3-201ENST00000295225 SUB1P53999 127 aaKnown RBP eCLIP10.48□□□□□ -0.73
KCNIP3-201ENST00000295225 C12orf54Q6X4T0 127 aa10.48□□□□□ -0.73
KCNIP3-201ENST00000295225 AP1S3Q96PC3 154 aa10.48□□□□□ -0.73
KCNIP3-201ENST00000295225 UTP20O75691 2785 aaKnown RBP10.48□□□□□ -0.73
KCNIP3-201ENST00000295225 TRAV9-1A0A075B6T8 112 aa10.48□□□□□ -0.73
KCNIP3-201ENST00000295225 TRBV9A0A0B4J1U6 114 aa10.48□□□□□ -0.73
KCNIP3-201ENST00000295225 C7orf71A4D174 169 aa10.48□□□□□ -0.73
KCNIP3-201ENST00000295225 SHISA9B4DS77 424 aa10.48□□□□□ -0.73
KCNIP3-201ENST00000295225 FAM106CPP0CH98 169 aa10.48□□□□□ -0.73
KCNIP3-201ENST00000295225 COL8A1P27658 744 aa10.48□□□□□ -0.73
KCNIP3-201ENST00000295225 FAM106AQ4KMX7 169 aa10.48□□□□□ -0.73
KCNIP3-201ENST00000295225 BAALCQ8WXS3 180 aa10.48□□□□□ -0.73
KCNIP3-201ENST00000295225 TMEM133Q9H2Q1 129 aa10.48□□□□□ -0.73
KCNIP3-201ENST00000295225 A8MZ25 164 aa10.47□□□□□ -0.73
KCNIP3-201ENST00000295225 CA7P43166 264 aa10.47□□□□□ -0.73
KCNIP3-201ENST00000295225 DLX6P56179 175 aa10.47□□□□□ -0.73
KCNIP3-201ENST00000295225 IGHV1-3A0A0C4DH29 117 aa10.47□□□□□ -0.73
KCNIP3-201ENST00000295225 LOC389332A0A1B0GUA5 103 aa10.47□□□□□ -0.73
KCNIP3-201ENST00000295225 TINCRA0A1B0GVN0 87 aa10.47□□□□□ -0.73
KCNIP3-201ENST00000295225 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.47□□□□□ -0.73
KCNIP3-201ENST00000295225 FNDC10F2Z333 226 aa10.47□□□□□ -0.73
KCNIP3-201ENST00000295225 TCRAP04437 139 aa10.47□□□□□ -0.73
KCNIP3-201ENST00000295225 HES1Q14469 280 aa10.47□□□□□ -0.73
KCNIP3-201ENST00000295225 TMEM155Q4W5P6 130 aa10.47□□□□□ -0.73
KCNIP3-201ENST00000295225 PPP1R27Q86WC6 154 aa10.47□□□□□ -0.73
KCNIP3-201ENST00000295225 NUP37Q8NFH4 326 aa10.47□□□□□ -0.73
KCNIP3-201ENST00000295225 VSTM2AQ8TAG5 236 aa10.47□□□□□ -0.73
KCNIP3-201ENST00000295225 GP9P14770 177 aa10.47□□□□□ -0.73
KCNIP3-201ENST00000295225 MEF2CQ06413 473 aaPredicted RBP10.47□□□□□ -0.73
KCNIP3-201ENST00000295225 SRSF12Q8WXF0 261 aaKnown RBP10.47□□□□□ -0.73
KCNIP3-201ENST00000295225 C2orf70A6NJV1 201 aa10.46□□□□□ -0.73
KCNIP3-201ENST00000295225 MYCNOSP40205 109 aa10.46□□□□□ -0.73
KCNIP3-201ENST00000295225 C3orf36Q3SXR2 165 aa10.46□□□□□ -0.73
KCNIP3-201ENST00000295225 TMEM97Q5BJF2 176 aa10.46□□□□□ -0.73
KCNIP3-201ENST00000295225 OXLD1Q5BKU9 147 aa10.46□□□□□ -0.73
KCNIP3-201ENST00000295225 BVES-AS1Q5T3Y7 98 aa10.46□□□□□ -0.73
KCNIP3-201ENST00000295225 WFDC3Q8IUB2 231 aa10.46□□□□□ -0.73
KCNIP3-201ENST00000295225 TEX45Q8NA69 505 aa10.46□□□□□ -0.73
KCNIP3-201ENST00000295225 RPP21Q9H633 154 aaKnown RBP10.46□□□□□ -0.73
KCNIP3-201ENST00000295225 IGHV3OR16-13A0A075B7E8 117 aa10.46□□□□□ -0.74
KCNIP3-201ENST00000295225 IGHV3-74A0A0B4J1X5 117 aa10.46□□□□□ -0.74
KCNIP3-201ENST00000295225 TIMM23O14925 209 aa10.46□□□□□ -0.74
KCNIP3-201ENST00000295225 ARMS2P0C7Q2 107 aa10.46□□□□□ -0.74
KCNIP3-201ENST00000295225 RPEQ96AT9 228 aa10.46□□□□□ -0.74
KCNIP3-201ENST00000295225 C8orf49Q96NF6 230 aa10.46□□□□□ -0.74
KCNIP3-201ENST00000295225 CENPEQ02224 2701 aa10.46□□□□□ -0.74
KCNIP3-201ENST00000295225 CCDC179H3BU77 68 aa10.45□□□□□ -0.74
KCNIP3-201ENST00000295225 SLC25A39Q9BZJ4 359 aaPredicted RBP10.45□□□□□ -0.74
KCNIP3-201ENST00000295225 MAP1LC3AQ9H492 121 aa10.45□□□□□ -0.74
KCNIP3-201ENST00000295225 IGHV1-24A0A0C4DH33 117 aa10.45□□□□□ -0.74
KCNIP3-201ENST00000295225 TEX22C9J3V5 150 aa10.45□□□□□ -0.74
KCNIP3-201ENST00000295225 NHLRC4P0CG21 123 aaPredicted RBP10.45□□□□□ -0.74
KCNIP3-201ENST00000295225 MPV17L2Q567V2 206 aa10.45□□□□□ -0.74
KCNIP3-201ENST00000295225 THAP8Q8NA92 274 aa10.45□□□□□ -0.74
KCNIP3-201ENST00000295225 OR2K2Q8NGT1 345 aa10.45□□□□□ -0.74
KCNIP3-201ENST00000295225 SPAG8Q99932 426 aaPredicted RBP10.45□□□□□ -0.74
KCNIP3-201ENST00000295225 J3KT08 172 aa10.44□□□□□ -0.74
KCNIP3-201ENST00000295225 CHEK1O14757 476 aa10.44□□□□□ -0.74
KCNIP3-201ENST00000295225 EVI2AP22794 236 aa10.44□□□□□ -0.74
KCNIP3-201ENST00000295225 HBBP68871 147 aa10.44□□□□□ -0.74
KCNIP3-201ENST00000295225 ADAMTSL5Q6ZMM2 481 aa10.44□□□□□ -0.74
KCNIP3-201ENST00000295225 LCNL1Q6ZST4 164 aa10.44□□□□□ -0.74
KCNIP3-201ENST00000295225 HIGD1AQ9Y241 93 aa10.44□□□□□ -0.74
KCNIP3-201ENST00000295225 FAM231BA6NCW3 169 aa10.44□□□□□ -0.74
KCNIP3-201ENST00000295225 OR4C46A6NHA9 309 aa10.44□□□□□ -0.74
KCNIP3-201ENST00000295225 BUB1B-PAK6H3BSN5 160 aa10.44□□□□□ -0.74
KCNIP3-201ENST00000295225 IL4P05112 153 aa10.44□□□□□ -0.74
KCNIP3-201ENST00000295225 HLA-DMBP28068 263 aa10.44□□□□□ -0.74
KCNIP3-201ENST00000295225 ZNF415Q09FC8 603 aa10.44□□□□□ -0.74
KCNIP3-201ENST00000295225 C8orf31Q8N9H6 132 aa10.44□□□□□ -0.74
KCNIP3-201ENST00000295225 RASL11BQ9BPW5 248 aa10.44□□□□□ -0.74
KCNIP3-201ENST00000295225 MLST8Q9BVC4 326 aa10.44□□□□□ -0.74
KCNIP3-201ENST00000295225 HIVEP3Q5T1R4 2406 aa10.44□□□□□ -0.74
KCNIP3-201ENST00000295225 IGKV1-17P01599 117 aa10.44□□□□□ -0.74
KCNIP3-201ENST00000295225 LOXL1Q08397 574 aaPredicted RBP10.44□□□□□ -0.74
KCNIP3-201ENST00000295225 IGHV3-66A0A0C4DH42 116 aa10.43□□□□□ -0.74
KCNIP3-201ENST00000295225 TMEM89A2RUT3 159 aa10.43□□□□□ -0.74
KCNIP3-201ENST00000295225 FAM120AOSQ5T036 256 aa10.43□□□□□ -0.74
KCNIP3-201ENST00000295225 Q8TAT8 98 aa10.43□□□□□ -0.74
KCNIP3-201ENST00000295225 FAM110DQ8TAY7 271 aaPredicted RBP10.43□□□□□ -0.74
KCNIP3-201ENST00000295225 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.43□□□□□ -0.74
KCNIP3-201ENST00000295225 PPIFP30405 207 aaKnown RBP10.43□□□□□ -0.74
KCNIP3-201ENST00000295225 EMP1P54849 157 aa10.43□□□□□ -0.74
KCNIP3-201ENST00000295225 TMEM75Q8N9X5 138 aa10.43□□□□□ -0.74
KCNIP3-201ENST00000295225 C8orf46Q8TAG6 207 aa10.43□□□□□ -0.74
KCNIP3-201ENST00000295225 A0A1B0GXF2 115 aa10.42□□□□□ -0.74
KCNIP3-201ENST00000295225 A6NDN8 102 aa10.42□□□□□ -0.74
KCNIP3-201ENST00000295225 SMKR1H3BMG3 65 aa10.42□□□□□ -0.74
KCNIP3-201ENST00000295225 ST20Q9HBF5 79 aa10.42□□□□□ -0.74
KCNIP3-201ENST00000295225 NCR2O95944 276 aa10.42□□□□□ -0.74
KCNIP3-201ENST00000295225 LTAP01374 205 aa10.42□□□□□ -0.74
KCNIP3-201ENST00000295225 IGLV1-47P01700 117 aa10.42□□□□□ -0.74
KCNIP3-201ENST00000295225 IGLV2-11P01706 119 aa10.42□□□□□ -0.74
KCNIP3-201ENST00000295225 Q86TA4 180 aa10.42□□□□□ -0.74
KCNIP3-201ENST00000295225 OR8B3Q8NGG8 313 aa10.42□□□□□ -0.74
KCNIP3-201ENST00000295225 F11RQ9Y624 299 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms