RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 IGHV4-30-4P0DP06 118 aa9.95□□□□□ -0.82
SLX4-201ENST00000294008 IGHV4-31P0DP07 118 aa9.95□□□□□ -0.82
SLX4-201ENST00000294008 PRR4Q16378 134 aa9.95□□□□□ -0.82
SLX4-201ENST00000294008 Q8NFD4 153 aa9.95□□□□□ -0.82
SLX4-201ENST00000294008 M0R2N4 97 aa9.95□□□□□ -0.82
SLX4-201ENST00000294008 COX7A2LO14548 114 aa9.95□□□□□ -0.82
SLX4-201ENST00000294008 ZNF664Q8N3J9 261 aa9.95□□□□□ -0.82
SLX4-201ENST00000294008 ERVH48-1M5A8F1 160 aa9.95□□□□□ -0.82
SLX4-201ENST00000294008 DEFB135Q30KP9 77 aa9.95□□□□□ -0.82
SLX4-201ENST00000294008 MLST8Q9BVC4 326 aa9.95□□□□□ -0.82
SLX4-201ENST00000294008 MRPS18CQ9Y3D5 142 aaKnown RBP9.95□□□□□ -0.82
SLX4-201ENST00000294008 ELANEP08246 267 aa9.94□□□□□ -0.82
SLX4-201ENST00000294008 A0A087WZ39 114 aa9.94□□□□□ -0.82
SLX4-201ENST00000294008 Q86TA4 180 aa9.94□□□□□ -0.82
SLX4-201ENST00000294008 HIGD2AQ9BW72 106 aa9.94□□□□□ -0.82
SLX4-201ENST00000294008 IGHV2-70DA0A0C4DH43 119 aa9.94□□□□□ -0.82
SLX4-201ENST00000294008 GGNQ86UU5 652 aa9.94□□□□□ -0.82
SLX4-201ENST00000294008 SPTBN2O15020 2390 aa9.94□□□□□ -0.82
SLX4-201ENST00000294008 THADAQ6YHU6 1953 aa9.94□□□□□ -0.82
SLX4-201ENST00000294008 SRRM5B3KS81 715 aa9.94□□□□□ -0.82
SLX4-201ENST00000294008 MST1P26927 711 aa9.94□□□□□ -0.82
SLX4-201ENST00000294008 CTHRC1Q96CG8 243 aa9.94□□□□□ -0.82
SLX4-201ENST00000294008 FBLN5Q9UBX5 448 aa9.94□□□□□ -0.82
SLX4-201ENST00000294008 TRBV5-3A0A0A0MS03 114 aa9.94□□□□□ -0.82
SLX4-201ENST00000294008 NDUFC2O95298 119 aa9.94□□□□□ -0.82
SLX4-201ENST00000294008 NTF4P34130 210 aa9.94□□□□□ -0.82
SLX4-201ENST00000294008 DEFB112Q30KQ8 113 aa9.94□□□□□ -0.82
SLX4-201ENST00000294008 IGKV1-16P04430 117 aa9.93□□□□□ -0.82
SLX4-201ENST00000294008 ZNF134P52741 427 aa9.93□□□□□ -0.82
SLX4-201ENST00000294008 K7ERJ3 54 aa9.93□□□□□ -0.82
SLX4-201ENST00000294008 ATP5G1P05496 136 aa9.93□□□□□ -0.82
SLX4-201ENST00000294008 C3orf79P0CE67 100 aa9.93□□□□□ -0.82
SLX4-201ENST00000294008 LTBP4Q8N2S1 1624 aa9.93□□□□□ -0.82
SLX4-201ENST00000294008 SPINK6Q6UWN8 80 aa9.93□□□□□ -0.82
SLX4-201ENST00000294008 RNF5Q99942 180 aa9.93□□□□□ -0.82
SLX4-201ENST00000294008 HIST1H2BKO60814 126 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 HIST1H2BJP06899 126 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 HIST1H2BOP23527 126 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 HIST1H2BBP33778 126 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 HIST1H2BDP58876 126 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 HIST1H2BCP62807 126 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 HIST2H2BEQ16778 126 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.92□□□□□ -0.82
SLX4-201ENST00000294008 HIST1H2BHQ93079 126 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 HIST1H2BNQ99877 126 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 HIST1H2BMQ99879 126 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 WDR83OSQ9Y284 106 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 DOCK5Q9H7D0 1870 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 GNRH2O43555 120 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 ATP6V0E2Q8NHE4 81 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 NACAE9PAV3 2078 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 MYOFQ9NZM1 2061 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 UBE2D3P61077 147 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 C3orf22Q8N5N4 141 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 MRPL53Q96EL3 112 aaKnown RBP9.92□□□□□ -0.82
SLX4-201ENST00000294008 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.92□□□□□ -0.82
SLX4-201ENST00000294008 PRR20EP86478 221 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 PRR20CP86479 221 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 PRR20DP86480 221 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 PRR20BP86481 221 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 PRR20AP86496 221 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 IFITM3Q01628 133 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 SLC25A29Q8N8R3 303 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 UBE2CO00762 179 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 CXCL1P09341 107 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 PCP2Q8IVA1 136 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 BRK1Q8WUW1 75 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 SHANK2-AS3Q9BTD1 123 aa9.92□□□□□ -0.82
SLX4-201ENST00000294008 POLR2AP24928 1970 aaKnown RBP9.92□□□□□ -0.82
SLX4-201ENST00000294008 KIAA1217Q5T5P2 1943 aa9.91□□□□□ -0.82
SLX4-201ENST00000294008 MPDZO75970 2070 aa9.91□□□□□ -0.82
SLX4-201ENST00000294008 LINC00473A8K010 186 aa9.91□□□□□ -0.82
SLX4-201ENST00000294008 Q6ZWC4 215 aa9.91□□□□□ -0.82
SLX4-201ENST00000294008 PLXNB2O15031 1838 aa9.91□□□□□ -0.82
SLX4-201ENST00000294008 FAM231BA6NCW3 169 aa9.91□□□□□ -0.82
SLX4-201ENST00000294008 WIPF3A6NGB9 483 aa9.91□□□□□ -0.82
SLX4-201ENST00000294008 HIGD2BQ4VC39 106 aa9.91□□□□□ -0.82
SLX4-201ENST00000294008 ZNF407Q9C0G0 2248 aa9.91□□□□□ -0.82
SLX4-201ENST00000294008 PSMB8P28062 276 aa9.91□□□□□ -0.82
SLX4-201ENST00000294008 DYSFO75923 2080 aa9.91□□□□□ -0.82
SLX4-201ENST00000294008 IGKV1D-8A0A087WSZ0 117 aa9.91□□□□□ -0.82
SLX4-201ENST00000294008 A0A087WV48 116 aa9.91□□□□□ -0.82
SLX4-201ENST00000294008 BVES-AS1Q5T3Y7 98 aa9.91□□□□□ -0.82
SLX4-201ENST00000294008 NRGNQ92686 78 aa9.91□□□□□ -0.82
SLX4-201ENST00000294008 CACNA1BQ00975 2339 aa9.91□□□□□ -0.82
SLX4-201ENST00000294008 KLK12Q9UKR0 248 aa9.9□□□□□ -0.82
SLX4-201ENST00000294008 IGLV3-21P80748 117 aaPredicted RBP9.9□□□□□ -0.82
SLX4-201ENST00000294008 HIST1H2BLQ99880 126 aa9.9□□□□□ -0.82
SLX4-201ENST00000294008 TRPM3Q9HCF6 1732 aaPredicted RBP9.9□□□□□ -0.82
SLX4-201ENST00000294008 USP17L23D6RBM5 183 aa9.9□□□□□ -0.82
SLX4-201ENST00000294008 LAIR2Q6ISS4 152 aa9.9□□□□□ -0.82
SLX4-201ENST00000294008 ATRAIDQ6UW56 229 aa9.9□□□□□ -0.82
SLX4-201ENST00000294008 A0A1B0GTI1 187 aa9.9□□□□□ -0.83
SLX4-201ENST00000294008 J3QLI3 93 aa9.9□□□□□ -0.83
SLX4-201ENST00000294008 HOXB4P17483 251 aaPredicted RBP9.9□□□□□ -0.83
SLX4-201ENST00000294008 SMAD5-AS1Q9Y6J3 95 aa9.9□□□□□ -0.83
SLX4-201ENST00000294008 X6R8D5 127 aa9.9□□□□□ -0.83
SLX4-201ENST00000294008 IGKV1D-17A0A075B6S4 117 aa9.9□□□□□ -0.83
SLX4-201ENST00000294008 FAM110AQ9BQ89 295 aa9.89□□□□□ -0.83
SLX4-201ENST00000294008 KIAA2026Q5HYC2 2103 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms