RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 CT83Q5H943 113 aa12.7□□□□□ -0.38
HIF3A-203ENST00000291300 Q8N2B8 174 aa12.7□□□□□ -0.38
HIF3A-203ENST00000291300 C12orf57Q99622 126 aa12.7□□□□□ -0.38
HIF3A-203ENST00000291300 SMR3AQ99954 134 aa12.7□□□□□ -0.38
HIF3A-203ENST00000291300 SSBP4Q9BWG4 385 aaPredicted RBP12.7□□□□□ -0.38
HIF3A-203ENST00000291300 TMEM89A2RUT3 159 aa12.69□□□□□ -0.38
HIF3A-203ENST00000291300 DNAJC9-AS1A6NH13 148 aa12.69□□□□□ -0.38
HIF3A-203ENST00000291300 SOCS3O14543 225 aa12.69□□□□□ -0.38
HIF3A-203ENST00000291300 SH2D1AO60880 128 aa12.69□□□□□ -0.38
HIF3A-203ENST00000291300 FABP4P15090 132 aa12.69□□□□□ -0.38
HIF3A-203ENST00000291300 CAMPP49913 170 aa12.69□□□□□ -0.38
HIF3A-203ENST00000291300 MEOX2P50222 304 aa12.69□□□□□ -0.38
HIF3A-203ENST00000291300 FOXE3Q13461 319 aa12.69□□□□□ -0.38
HIF3A-203ENST00000291300 ARL6IP6Q8N6S5 226 aa12.69□□□□□ -0.38
HIF3A-203ENST00000291300 AGPAT4-IT1Q9H0P7 198 aa12.69□□□□□ -0.38
HIF3A-203ENST00000291300 DAZ1Q9NQZ3 744 aaKnown RBP12.69□□□□□ -0.38
HIF3A-203ENST00000291300 IGHV4OR15-8A0A075B7B6 117 aa12.68□□□□□ -0.38
HIF3A-203ENST00000291300 A0A087WW49 117 aa12.68□□□□□ -0.38
HIF3A-203ENST00000291300 TMSB15BA0A087X1C1 80 aa12.68□□□□□ -0.38
HIF3A-203ENST00000291300 A0A1B0GXF2 115 aa12.68□□□□□ -0.38
HIF3A-203ENST00000291300 LINC00310P59036 64 aa12.68□□□□□ -0.38
HIF3A-203ENST00000291300 ZNF575Q86XF7 245 aa12.68□□□□□ -0.38
HIF3A-203ENST00000291300 C16orf92Q96LL3 132 aa12.68□□□□□ -0.38
HIF3A-203ENST00000291300 HIST1H2BLQ99880 126 aa12.68□□□□□ -0.38
HIF3A-203ENST00000291300 CD5LO43866 347 aa12.68□□□□□ -0.38
HIF3A-203ENST00000291300 OR10D4PQ8NGN7 298 aa12.68□□□□□ -0.38
HIF3A-203ENST00000291300 SMPXQ9UHP9 88 aa12.68□□□□□ -0.38
HIF3A-203ENST00000291300 ELANEP08246 267 aa12.67□□□□□ -0.38
HIF3A-203ENST00000291300 RPL11P62913 178 aaKnown RBP12.67□□□□□ -0.38
HIF3A-203ENST00000291300 DEFB136Q30KP8 78 aa12.67□□□□□ -0.38
HIF3A-203ENST00000291300 TCTEX1D4Q5JR98 221 aa12.67□□□□□ -0.38
HIF3A-203ENST00000291300 Q6ZQT7 251 aa12.67□□□□□ -0.38
HIF3A-203ENST00000291300 WIPF2Q8TF74 440 aaPredicted RBP12.67□□□□□ -0.38
HIF3A-203ENST00000291300 AMBPP02760 352 aa12.67□□□□□ -0.38
HIF3A-203ENST00000291300 WDR73Q6P4I2 378 aa12.67□□□□□ -0.38
HIF3A-203ENST00000291300 COX8CQ7Z4L0 72 aa12.67□□□□□ -0.38
HIF3A-203ENST00000291300 OR4B1Q8NGF8 309 aa12.67□□□□□ -0.38
HIF3A-203ENST00000291300 NOTCH2Q04721 2471 aa12.66□□□□□ -0.38
HIF3A-203ENST00000291300 TMEM213A2RRL7 107 aa12.66□□□□□ -0.38
HIF3A-203ENST00000291300 LGALS1P09382 135 aaKnown RBP12.66□□□□□ -0.38
HIF3A-203ENST00000291300 SAPCD1Q5SSQ6 148 aa12.66□□□□□ -0.38
HIF3A-203ENST00000291300 CDPF1Q6NVV7 123 aa12.66□□□□□ -0.38
HIF3A-203ENST00000291300 RBPMS2Q6ZRY4 209 aaKnown RBP12.66□□□□□ -0.38
HIF3A-203ENST00000291300 Q6ZSV7 163 aa12.66□□□□□ -0.38
HIF3A-203ENST00000291300 KLHDC1Q8N7A1 406 aa12.66□□□□□ -0.38
HIF3A-203ENST00000291300 RNF152Q8N8N0 203 aa12.66□□□□□ -0.38
HIF3A-203ENST00000291300 S100A8P05109 93 aa12.65□□□□□ -0.38
HIF3A-203ENST00000291300 CT45A10P0DMU9 189 aa12.65□□□□□ -0.38
HIF3A-203ENST00000291300 SYNJ2BPP57105 145 aa12.65□□□□□ -0.38
HIF3A-203ENST00000291300 FAM106AQ4KMX7 169 aa12.65□□□□□ -0.38
HIF3A-203ENST00000291300 FAM162BQ5T6X4 162 aa12.65□□□□□ -0.38
HIF3A-203ENST00000291300 GFRA4Q9GZZ7 299 aa12.65□□□□□ -0.38
HIF3A-203ENST00000291300 CRISP2P16562 243 aa12.65□□□□□ -0.38
HIF3A-203ENST00000291300 A0A1W2PS18 150 aa12.64□□□□□ -0.39
HIF3A-203ENST00000291300 F6UB75 175 aa12.64□□□□□ -0.39
HIF3A-203ENST00000291300 K7EMT4 169 aa12.64□□□□□ -0.39
HIF3A-203ENST00000291300 HLA-DQA1P01909 254 aa12.64□□□□□ -0.39
HIF3A-203ENST00000291300 APCSP02743 223 aa12.64□□□□□ -0.39
HIF3A-203ENST00000291300 MT-ND6P03923 174 aa12.64□□□□□ -0.39
HIF3A-203ENST00000291300 ARMS2P0C7Q2 107 aa12.64□□□□□ -0.39
HIF3A-203ENST00000291300 S100A2P29034 98 aa12.64□□□□□ -0.39
HIF3A-203ENST00000291300 PYY3Q5JQD4 70 aa12.64□□□□□ -0.39
HIF3A-203ENST00000291300 UBE2E2Q96LR5 201 aa12.64□□□□□ -0.39
HIF3A-203ENST00000291300 DUX3Q96PT4 197 aa12.64□□□□□ -0.39
HIF3A-203ENST00000291300 NRN1Q9NPD7 142 aa12.64□□□□□ -0.39
HIF3A-203ENST00000291300 MUC21A0A0G2JKD1 596 aa12.64□□□□□ -0.39
HIF3A-203ENST00000291300 MUC21A0A140T8X8 626 aa12.64□□□□□ -0.39
HIF3A-203ENST00000291300 RBAKDNA6NC62 111 aa12.64□□□□□ -0.39
HIF3A-203ENST00000291300 MUC21Q5SSG8 566 aa12.64□□□□□ -0.39
HIF3A-203ENST00000291300 ZNF738Q8NE65 137 aa12.64□□□□□ -0.39
HIF3A-203ENST00000291300 TPPP3Q9BW30 176 aa12.64□□□□□ -0.39
HIF3A-203ENST00000291300 OTOGQ6ZRI0 2925 aa12.63□□□□□ -0.39
HIF3A-203ENST00000291300 SRIP30626 198 aa12.63□□□□□ -0.39
HIF3A-203ENST00000291300 HOXD3P31249 432 aaPredicted RBP12.63□□□□□ -0.39
HIF3A-203ENST00000291300 FOXA3P55318 350 aaPredicted RBP12.63□□□□□ -0.39
HIF3A-203ENST00000291300 SSTP61278 116 aa12.63□□□□□ -0.39
HIF3A-203ENST00000291300 TMEM86BQ8N661 226 aa12.63□□□□□ -0.39
HIF3A-203ENST00000291300 MRPL53Q96EL3 112 aaKnown RBP12.63□□□□□ -0.39
HIF3A-203ENST00000291300 TMEM189A5PLL7 270 aa12.62□□□□□ -0.39
HIF3A-203ENST00000291300 HBBP68871 147 aa12.62□□□□□ -0.39
HIF3A-203ENST00000291300 PRR9Q5T870 116 aa12.62□□□□□ -0.39
HIF3A-203ENST00000291300 RASL11AQ6T310 242 aa12.62□□□□□ -0.39
HIF3A-203ENST00000291300 ATP5L2Q7Z4Y8 100 aa12.62□□□□□ -0.39
HIF3A-203ENST00000291300 PACRGQ96M98 296 aaPredicted RBP12.62□□□□□ -0.39
HIF3A-203ENST00000291300 C11orf21Q9P2W6 132 aa12.62□□□□□ -0.39
HIF3A-203ENST00000291300 FAM231BA6NCW3 169 aa12.62□□□□□ -0.39
HIF3A-203ENST00000291300 SERF1AO75920 110 aa12.62□□□□□ -0.39
HIF3A-203ENST00000291300 SLURP1P55000 103 aa12.62□□□□□ -0.39
HIF3A-203ENST00000291300 COX19Q49B96 90 aa12.62□□□□□ -0.39
HIF3A-203ENST00000291300 C9orf47Q6ZRZ4 202 aa12.62□□□□□ -0.39
HIF3A-203ENST00000291300 WFDC3Q8IUB2 231 aa12.62□□□□□ -0.39
HIF3A-203ENST00000291300 RCHY1Q96PM5 261 aa12.62□□□□□ -0.39
HIF3A-203ENST00000291300 FBLL1A6NHQ2 334 aaKnown RBP12.61□□□□□ -0.39
HIF3A-203ENST00000291300 A8MWP6 167 aa12.61□□□□□ -0.39
HIF3A-203ENST00000291300 SMIM6P0DI80 62 aa12.61□□□□□ -0.39
HIF3A-203ENST00000291300 ZNF138P52744 262 aa12.61□□□□□ -0.39
HIF3A-203ENST00000291300 IQCJQ1A5X6 159 aa12.61□□□□□ -0.39
HIF3A-203ENST00000291300 UFC1Q9Y3C8 167 aa12.61□□□□□ -0.39
HIF3A-203ENST00000291300 TMEM78Q5T7P6 136 aa12.61□□□□□ -0.39
HIF3A-203ENST00000291300 ADAMTSL5Q6ZMM2 481 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms