RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 FAM231AP0DMU4 169 aa6.75□□□□□ -1.33
HMHB1-201ENST00000289448 FAM231CP0DMU5 169 aa6.75□□□□□ -1.33
HMHB1-201ENST00000289448 HTN3P15516 51 aa6.75□□□□□ -1.33
HMHB1-201ENST00000289448 FHITP49789 147 aa6.75□□□□□ -1.33
HMHB1-201ENST00000289448 RAB2AP61019 212 aa6.75□□□□□ -1.33
HMHB1-201ENST00000289448 HIST1H1AQ02539 215 aaPredicted RBP6.75□□□□□ -1.33
HMHB1-201ENST00000289448 PSG3Q16557 428 aa6.75□□□□□ -1.33
HMHB1-201ENST00000289448 TOR2AQ5JU69 321 aa6.75□□□□□ -1.33
HMHB1-201ENST00000289448 TMEM208Q9BTX3 173 aa6.75□□□□□ -1.33
HMHB1-201ENST00000289448 NPCDR1Q9BY65 106 aa6.75□□□□□ -1.33
HMHB1-201ENST00000289448 PCLOQ9Y6V0 5065 aa6.75□□□□□ -1.33
HMHB1-201ENST00000289448 RYR1P21817 5038 aa6.74□□□□□ -1.33
HMHB1-201ENST00000289448 TEX48A0A1B0GUV7 120 aa6.74□□□□□ -1.33
HMHB1-201ENST00000289448 H3BTX0 84 aa6.74□□□□□ -1.33
HMHB1-201ENST00000289448 M0R2N4 97 aa6.74□□□□□ -1.33
HMHB1-201ENST00000289448 SLC17A3O00476 420 aa6.74□□□□□ -1.33
HMHB1-201ENST00000289448 RTL8CO15255 209 aa6.74□□□□□ -1.33
HMHB1-201ENST00000289448 INSP01308 110 aa6.74□□□□□ -1.33
HMHB1-201ENST00000289448 DAD1P61803 113 aa6.74□□□□□ -1.33
HMHB1-201ENST00000289448 FFAR4Q5NUL3 377 aa6.74□□□□□ -1.33
HMHB1-201ENST00000289448 TMEM88Q6PEY1 159 aa6.74□□□□□ -1.33
HMHB1-201ENST00000289448 LINC00305Q7Z4B0 112 aa6.74□□□□□ -1.33
HMHB1-201ENST00000289448 RPUSD4Q96CM3 377 aaKnown RBP6.74□□□□□ -1.33
HMHB1-201ENST00000289448 FAM210BQ96KR6 192 aa6.74□□□□□ -1.33
HMHB1-201ENST00000289448 TRAV5A0A0B4J249 113 aa6.73□□□□□ -1.33
HMHB1-201ENST00000289448 A0A1B0GVY2 172 aa6.73□□□□□ -1.33
HMHB1-201ENST00000289448 PRAC2D3DTV9 90 aa6.73□□□□□ -1.33
HMHB1-201ENST00000289448 H3BQ15 152 aa6.73□□□□□ -1.33
HMHB1-201ENST00000289448 RHOBP62745 196 aa6.73□□□□□ -1.33
HMHB1-201ENST00000289448 KIR3DS1Q14943 382 aa6.73□□□□□ -1.33
HMHB1-201ENST00000289448 ACOT6Q3I5F7 207 aaPredicted RBP6.73□□□□□ -1.33
HMHB1-201ENST00000289448 SFT2D1Q8WV19 159 aa6.73□□□□□ -1.33
HMHB1-201ENST00000289448 MBD3L1Q8WWY6 194 aa6.73□□□□□ -1.33
HMHB1-201ENST00000289448 KRTAP17-1Q9BYP8 105 aa6.73□□□□□ -1.33
HMHB1-201ENST00000289448 ACTR3CQ9C0K3 210 aaPredicted RBP6.73□□□□□ -1.33
HMHB1-201ENST00000289448 ZNF331Q9NQX6 463 aaPredicted RBP6.73□□□□□ -1.33
HMHB1-201ENST00000289448 IGLV2-18A0A075B6J9 118 aa6.72□□□□□ -1.33
HMHB1-201ENST00000289448 CTXND1A0A1B0GTU2 59 aa6.72□□□□□ -1.33
HMHB1-201ENST00000289448 COX7A2P2O60397 106 aa6.72□□□□□ -1.33
HMHB1-201ENST00000289448 IGLC2P0DOY2 106 aa6.72□□□□□ -1.33
HMHB1-201ENST00000289448 DEFB130BP0DP73 79 aa6.72□□□□□ -1.33
HMHB1-201ENST00000289448 DEFB130AP0DP74 79 aa6.72□□□□□ -1.33
HMHB1-201ENST00000289448 M6PRP20645 277 aa6.72□□□□□ -1.33
HMHB1-201ENST00000289448 TSPOP30536 169 aa6.72□□□□□ -1.33
HMHB1-201ENST00000289448 RPL29P47914 159 aaKnown RBP6.72□□□□□ -1.33
HMHB1-201ENST00000289448 PEA15Q15121 130 aa6.72□□□□□ -1.33
HMHB1-201ENST00000289448 MIC13Q5XKP0 118 aa6.72□□□□□ -1.33
HMHB1-201ENST00000289448 S100A7AQ86SG5 101 aa6.72□□□□□ -1.33
HMHB1-201ENST00000289448 LINC01587Q99440 93 aa6.72□□□□□ -1.33
HMHB1-201ENST00000289448 SMDT1Q9H4I9 107 aa6.72□□□□□ -1.33
HMHB1-201ENST00000289448 DNAJC4Q9NNZ3 241 aa6.72□□□□□ -1.33
HMHB1-201ENST00000289448 PXMP4Q9Y6I8 212 aa6.72□□□□□ -1.33
HMHB1-201ENST00000289448 TMEM218A2RU14 115 aa6.71□□□□□ -1.34
HMHB1-201ENST00000289448 MAP1LC3B2A6NCE7 125 aa6.71□□□□□ -1.34
HMHB1-201ENST00000289448 LYRM9A8MSI8 78 aa6.71□□□□□ -1.34
HMHB1-201ENST00000289448 TAS2R60P59551 318 aa6.71□□□□□ -1.34
HMHB1-201ENST00000289448 B2MP61769 119 aa6.71□□□□□ -1.34
HMHB1-201ENST00000289448 ZNF726P1Q15940 193 aa6.71□□□□□ -1.34
HMHB1-201ENST00000289448 GUK1Q16774 197 aa6.71□□□□□ -1.34
HMHB1-201ENST00000289448 LGALS9BQ3B8N2 356 aa6.71□□□□□ -1.34
HMHB1-201ENST00000289448 C10orf113Q5VZT2 155 aa6.71□□□□□ -1.34
HMHB1-201ENST00000289448 LCN15Q6UWW0 184 aa6.71□□□□□ -1.34
HMHB1-201ENST00000289448 Q6ZR54 194 aa6.71□□□□□ -1.34
HMHB1-201ENST00000289448 LINC00336Q6ZUF6 198 aa6.71□□□□□ -1.34
HMHB1-201ENST00000289448 BPIFA4PQ86YQ2 179 aa6.71□□□□□ -1.34
HMHB1-201ENST00000289448 OR10G4Q8NGN3 311 aa6.71□□□□□ -1.34
HMHB1-201ENST00000289448 OR10G9Q8NGN4 311 aa6.71□□□□□ -1.34
HMHB1-201ENST00000289448 OR10G7Q8NGN6 311 aa6.71□□□□□ -1.34
HMHB1-201ENST00000289448 MAP1LC3BQ9GZQ8 125 aa6.71□□□□□ -1.34
HMHB1-201ENST00000289448 TREM1Q9NP99 234 aa6.71□□□□□ -1.34
HMHB1-201ENST00000289448 SLC39A9Q9NUM3 307 aa6.71□□□□□ -1.34
HMHB1-201ENST00000289448 PPP1R14DQ9NXH3 145 aa6.71□□□□□ -1.34
HMHB1-201ENST00000289448 NACAE9PAV3 2078 aa6.7□□□□□ -1.34
HMHB1-201ENST00000289448 HTN1P15515 57 aa6.7□□□□□ -1.34
HMHB1-201ENST00000289448 TAGLN2P37802 199 aaKnown RBP6.7□□□□□ -1.34
HMHB1-201ENST00000289448 CDKN1BP46527 198 aa6.7□□□□□ -1.34
HMHB1-201ENST00000289448 CDC34P49427 236 aaPredicted RBP6.7□□□□□ -1.34
HMHB1-201ENST00000289448 RNF212Q495C1 297 aa6.7□□□□□ -1.34
HMHB1-201ENST00000289448 UBE2DNLQ8IWF7 75 aa6.7□□□□□ -1.34
HMHB1-201ENST00000289448 CCDC28AQ8IWP9 274 aa6.7□□□□□ -1.34
HMHB1-201ENST00000289448 TMEM256Q8N2U0 113 aa6.7□□□□□ -1.34
HMHB1-201ENST00000289448 RNASE8Q8TDE3 154 aaKnown RBP6.7□□□□□ -1.34
HMHB1-201ENST00000289448 SLC50A1Q9BRV3 221 aa6.7□□□□□ -1.34
HMHB1-201ENST00000289448 ZNF586Q9NXT0 402 aa6.7□□□□□ -1.34
HMHB1-201ENST00000289448 RNF24Q9Y225 148 aa6.7□□□□□ -1.34
HMHB1-201ENST00000289448 A0A1B0GV50 99 aa6.69□□□□□ -1.34
HMHB1-201ENST00000289448 RBFOX3A6NFN3 312 aa6.69□□□□□ -1.34
HMHB1-201ENST00000289448 PRSS29PA6NIE9 313 aa6.69□□□□□ -1.34
HMHB1-201ENST00000289448 IFNA1P01562 189 aa6.69□□□□□ -1.34
HMHB1-201ENST00000289448 CT45A10P0DMU9 189 aa6.69□□□□□ -1.34
HMHB1-201ENST00000289448 CCL20P78556 96 aa6.69□□□□□ -1.34
HMHB1-201ENST00000289448 SRSF3P84103 164 aaKnown RBP6.69□□□□□ -1.34
HMHB1-201ENST00000289448 GCSAMLQ5JQS6 135 aa6.69□□□□□ -1.34
HMHB1-201ENST00000289448 ZNF506Q5JVG8 444 aa6.69□□□□□ -1.34
HMHB1-201ENST00000289448 GFI1BQ5VTD9 330 aa6.69□□□□□ -1.34
HMHB1-201ENST00000289448 FAM122CQ6P4D5 195 aa6.69□□□□□ -1.34
HMHB1-201ENST00000289448 OR10J6PQ8NGY7 276 aa6.69□□□□□ -1.34
HMHB1-201ENST00000289448 RAB24Q969Q5 203 aa6.69□□□□□ -1.34
HMHB1-201ENST00000289448 SEC11CQ9BY50 192 aa6.69□□□□□ -1.34
HMHB1-201ENST00000289448 EIF5A2Q9GZV4 153 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms