RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 H3BMG7 143 aa14.05□□□□□ -0.16
PCDHA13-201ENST00000289272 FOXI2Q6ZQN5 318 aa14.05□□□□□ -0.16
PCDHA13-201ENST00000289272 Q8TCH9 128 aa14.05□□□□□ -0.16
PCDHA13-201ENST00000289272 IGKV3OR2-268A0A0C4DH90 116 aa14.05□□□□□ -0.16
PCDHA13-201ENST00000289272 A0A1W2PPI3 338 aa14.05□□□□□ -0.16
PCDHA13-201ENST00000289272 IGKV3-20P01619 116 aa14.05□□□□□ -0.16
PCDHA13-201ENST00000289272 CITED1Q99966 193 aa14.05□□□□□ -0.16
PCDHA13-201ENST00000289272 BUB1B-PAK6H3BSN5 160 aa14.04□□□□□ -0.16
PCDHA13-201ENST00000289272 KLRD1Q13241 179 aa14.04□□□□□ -0.16
PCDHA13-201ENST00000289272 PHLDA1Q8WV24 401 aaPredicted RBP14.04□□□□□ -0.16
PCDHA13-201ENST00000289272 TRAV41A0A0B4J266 112 aa14.04□□□□□ -0.16
PCDHA13-201ENST00000289272 IGHV3OR16-8A0A075B7F1 116 aa14.04□□□□□ -0.16
PCDHA13-201ENST00000289272 ADARB2-AS1A8MUL3 147 aa14.04□□□□□ -0.16
PCDHA13-201ENST00000289272 HIST1H4AP62805 103 aaKnown RBP14.04□□□□□ -0.16
PCDHA13-201ENST00000289272 ZNF876PQ49A33 203 aa14.04□□□□□ -0.16
PCDHA13-201ENST00000289272 VMO1Q7Z5L0 202 aa14.04□□□□□ -0.16
PCDHA13-201ENST00000289272 GATA3P23771 443 aa14.03□□□□□ -0.16
PCDHA13-201ENST00000289272 ITLN2Q8WWU7 325 aaPredicted RBP14.03□□□□□ -0.16
PCDHA13-201ENST00000289272 PRADC1Q9BSG0 188 aa14.03□□□□□ -0.16
PCDHA13-201ENST00000289272 HEATR1Q9H583 2144 aaKnown RBP14.03□□□□□ -0.16
PCDHA13-201ENST00000289272 C15orf32Q32M92 178 aa14.03□□□□□ -0.16
PCDHA13-201ENST00000289272 GAGE2AQ6NT46 116 aa14.03□□□□□ -0.16
PCDHA13-201ENST00000289272 GLMPQ8WWB7 406 aa14.03□□□□□ -0.16
PCDHA13-201ENST00000289272 PRR25Q96S07 402 aa14.03□□□□□ -0.16
PCDHA13-201ENST00000289272 IGLL5B9A064 214 aa14.03□□□□□ -0.16
PCDHA13-201ENST00000289272 USMG5Q96IX5 58 aa14.03□□□□□ -0.16
PCDHA13-201ENST00000289272 SMIM2Q9BVW6 85 aa14.03□□□□□ -0.16
PCDHA13-201ENST00000289272 SOCS3O14543 225 aa14.02□□□□□ -0.16
PCDHA13-201ENST00000289272 ZNF407Q9C0G0 2248 aa14.02□□□□□ -0.16
PCDHA13-201ENST00000289272 ROS1P08922 2347 aa14.02□□□□□ -0.17
PCDHA13-201ENST00000289272 CD24P25063 80 aa14.02□□□□□ -0.17
PCDHA13-201ENST00000289272 MRPL35Q9NZE8 188 aaKnown RBP14.02□□□□□ -0.17
PCDHA13-201ENST00000289272 FER1L5A0AVI2 2057 aa14.02□□□□□ -0.17
PCDHA13-201ENST00000289272 Q8TAT8 98 aa14.02□□□□□ -0.17
PCDHA13-201ENST00000289272 TEX48A0A1B0GUV7 120 aa14.01□□□□□ -0.17
PCDHA13-201ENST00000289272 C15orf65H3BRN8 121 aa14.01□□□□□ -0.17
PCDHA13-201ENST00000289272 FGF6P10767 208 aa14.01□□□□□ -0.17
PCDHA13-201ENST00000289272 ZNF415Q09FC8 603 aa14.01□□□□□ -0.17
PCDHA13-201ENST00000289272 C14orf178Q8N769 122 aaPredicted RBP14.01□□□□□ -0.17
PCDHA13-201ENST00000289272 RNF138Q8WVD3 245 aa14.01□□□□□ -0.17
PCDHA13-201ENST00000289272 SRD5A1P18405 259 aa14.01□□□□□ -0.17
PCDHA13-201ENST00000289272 PIP4P1Q86T03 277 aa14.01□□□□□ -0.17
PCDHA13-201ENST00000289272 C8orf31Q8N9H6 132 aa14.01□□□□□ -0.17
PCDHA13-201ENST00000289272 RIF1Q5UIP0 2472 aaKnown RBP14.01□□□□□ -0.17
PCDHA13-201ENST00000289272 TCF15Q12870 199 aa14.01□□□□□ -0.17
PCDHA13-201ENST00000289272 C11orf1Q9H5F2 150 aa14.01□□□□□ -0.17
PCDHA13-201ENST00000289272 ZNF503-AS2A6NEH8 195 aa14.01□□□□□ -0.17
PCDHA13-201ENST00000289272 IGHV3-11P01762 117 aa14.01□□□□□ -0.17
PCDHA13-201ENST00000289272 IL17RELQ6ZVW7 336 aa14□□□□□ -0.17
PCDHA13-201ENST00000289272 ACACAQ13085 2346 aa14□□□□□ -0.17
PCDHA13-201ENST00000289272 NUPR1O60356 82 aa14□□□□□ -0.17
PCDHA13-201ENST00000289272 IGKV1-16P04430 117 aa14□□□□□ -0.17
PCDHA13-201ENST00000289272 LINC00158P58513 81 aa14□□□□□ -0.17
PCDHA13-201ENST00000289272 TP53TG1Q9Y2A0 90 aa14□□□□□ -0.17
PCDHA13-201ENST00000289272 WDR86Q86TI4 376 aa14□□□□□ -0.17
PCDHA13-201ENST00000289272 SELENOKQ9Y6D0 94 aa14□□□□□ -0.17
PCDHA13-201ENST00000289272 IGF2BP2-AS1Q96M15 143 aa13.99□□□□□ -0.17
PCDHA13-201ENST00000289272 IGHV3-64A0A075B6Q5 118 aa13.99□□□□□ -0.17
PCDHA13-201ENST00000289272 IGHV1-69DA0A0B4J2H0 117 aa13.99□□□□□ -0.17
PCDHA13-201ENST00000289272 ANKRD29Q8N6D5 301 aa13.99□□□□□ -0.17
PCDHA13-201ENST00000289272 TCTEX1D4Q5JR98 221 aa13.99□□□□□ -0.17
PCDHA13-201ENST00000289272 PRSS57Q6UWY2 283 aa13.99□□□□□ -0.17
PCDHA13-201ENST00000289272 RPL36AP83881 106 aaKnown RBP13.99□□□□□ -0.17
PCDHA13-201ENST00000289272 MLANAQ16655 118 aa13.99□□□□□ -0.17
PCDHA13-201ENST00000289272 STHQ8IWL8 128 aa13.99□□□□□ -0.17
PCDHA13-201ENST00000289272 RPL36ALQ969Q0 106 aaKnown RBP13.99□□□□□ -0.17
PCDHA13-201ENST00000289272 VWC2LB2RUY7 222 aa13.98□□□□□ -0.17
PCDHA13-201ENST00000289272 LINC01356Q8N9X3 169 aa13.98□□□□□ -0.17
PCDHA13-201ENST00000289272 RHODO00212 210 aa13.98□□□□□ -0.17
PCDHA13-201ENST00000289272 RBAKDNA6NC62 111 aa13.98□□□□□ -0.17
PCDHA13-201ENST00000289272 KRTAP27-1Q3LI81 207 aa13.98□□□□□ -0.17
PCDHA13-201ENST00000289272 ZNF493Q6ZR52 646 aa13.98□□□□□ -0.17
PCDHA13-201ENST00000289272 TEN1Q86WV5 123 aa13.98□□□□□ -0.17
PCDHA13-201ENST00000289272 MRPL53Q96EL3 112 aaKnown RBP13.98□□□□□ -0.17
PCDHA13-201ENST00000289272 ZC2HC1AQ96GY0 325 aa13.98□□□□□ -0.17
PCDHA13-201ENST00000289272 C15orf53Q8NAA6 179 aa13.97□□□□□ -0.17
PCDHA13-201ENST00000289272 C8orf49Q96NF6 230 aa13.97□□□□□ -0.17
PCDHA13-201ENST00000289272 SRRM4A7MD48 611 aaKnown RBP13.97□□□□□ -0.17
PCDHA13-201ENST00000289272 Q6ZR03 302 aa13.97□□□□□ -0.17
PCDHA13-201ENST00000289272 SPATA12Q7Z6I5 190 aa13.97□□□□□ -0.17
PCDHA13-201ENST00000289272 GATD1Q8NB37 220 aa13.97□□□□□ -0.17
PCDHA13-201ENST00000289272 TRBV6-1A0A0K0K1D8 114 aa13.97□□□□□ -0.17
PCDHA13-201ENST00000289272 KIAA1671Q9BY89 1806 aa13.97□□□□□ -0.17
PCDHA13-201ENST00000289272 I3L3M4 83 aa13.97□□□□□ -0.17
PCDHA13-201ENST00000289272 CRYBA4P53673 196 aa13.97□□□□□ -0.17
PCDHA13-201ENST00000289272 YPEL4Q96NS1 127 aa13.97□□□□□ -0.17
PCDHA13-201ENST00000289272 IGF2-ASQ6U949 168 aa13.96□□□□□ -0.17
PCDHA13-201ENST00000289272 COL4A3Q01955 1670 aa13.96□□□□□ -0.17
PCDHA13-201ENST00000289272 FAM110DQ8TAY7 271 aaPredicted RBP13.96□□□□□ -0.17
PCDHA13-201ENST00000289272 CFC1BP0CG36 223 aa13.96□□□□□ -0.17
PCDHA13-201ENST00000289272 CFC1P0CG37 223 aa13.96□□□□□ -0.17
PCDHA13-201ENST00000289272 MALP21145 153 aa13.96□□□□□ -0.17
PCDHA13-201ENST00000289272 LENEPQ9Y5L5 61 aa13.96□□□□□ -0.17
PCDHA13-201ENST00000289272 ZNF106Q9H2Y7 1883 aaKnown RBP13.96□□□□□ -0.18
PCDHA13-201ENST00000289272 TRBV25-1A0A075B6N4 114 aa13.96□□□□□ -0.18
PCDHA13-201ENST00000289272 DKK1O94907 266 aa13.95□□□□□ -0.18
PCDHA13-201ENST00000289272 C17orf58Q2M2W7 97 aa13.95□□□□□ -0.18
PCDHA13-201ENST00000289272 C8orf86Q6ZUL3 223 aa13.95□□□□□ -0.18
PCDHA13-201ENST00000289272 DTX2Q86UW9 622 aa13.95□□□□□ -0.18
PCDHA13-201ENST00000289272 E7EQL1 145 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms