RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 H3BRN7 92 aa12.5□□□□□ -0.41
SMAD6-201ENST00000288840 FAM106AQ4KMX7 169 aa12.5□□□□□ -0.41
SMAD6-201ENST00000288840 AMMECR1LQ6DCA0 310 aa12.5□□□□□ -0.41
SMAD6-201ENST00000288840 SIGLEC15Q6ZMC9 328 aa12.5□□□□□ -0.41
SMAD6-201ENST00000288840 MBD6Q96DN6 1003 aa12.5□□□□□ -0.41
SMAD6-201ENST00000288840 FOXC2Q99958 501 aa12.5□□□□□ -0.41
SMAD6-201ENST00000288840 RELNP78509 3460 aa12.49□□□□□ -0.41
SMAD6-201ENST00000288840 DYNAPQ8N1N2 210 aa12.49□□□□□ -0.41
SMAD6-201ENST00000288840 CRYGCP07315 174 aa12.48□□□□□ -0.41
SMAD6-201ENST00000288840 GATA1P15976 413 aaPredicted RBP12.48□□□□□ -0.41
SMAD6-201ENST00000288840 H3BVH4 76 aa12.48□□□□□ -0.41
SMAD6-201ENST00000288840 ZFP36P26651 326 aaKnown RBP12.48□□□□□ -0.41
SMAD6-201ENST00000288840 ATP5J2P56134 94 aa12.48□□□□□ -0.41
SMAD6-201ENST00000288840 RPL24P83731 157 aaKnown RBP12.48□□□□□ -0.41
SMAD6-201ENST00000288840 EEF1AKMT3Q96AZ1 226 aa12.48□□□□□ -0.41
SMAD6-201ENST00000288840 IFI27L1Q96BM0 104 aa12.48□□□□□ -0.41
SMAD6-201ENST00000288840 ZNF492Q9P255 531 aa12.48□□□□□ -0.41
SMAD6-201ENST00000288840 GAGE10A6NGK3 116 aa12.48□□□□□ -0.41
SMAD6-201ENST00000288840 UCNP55089 124 aa12.48□□□□□ -0.41
SMAD6-201ENST00000288840 IL17RELQ6ZVW7 336 aa12.48□□□□□ -0.41
SMAD6-201ENST00000288840 EGR2P11161 476 aaPredicted RBP12.47□□□□□ -0.41
SMAD6-201ENST00000288840 DEFB1P60022 68 aa12.47□□□□□ -0.41
SMAD6-201ENST00000288840 IGF2-ASQ6U949 168 aa12.47□□□□□ -0.41
SMAD6-201ENST00000288840 MYOZ3Q8TDC0 251 aa12.47□□□□□ -0.41
SMAD6-201ENST00000288840 ABCA12Q86UK0 2595 aa12.47□□□□□ -0.41
SMAD6-201ENST00000288840 TRAV26-2A0A0B4J265 109 aa12.47□□□□□ -0.41
SMAD6-201ENST00000288840 LOXL1Q08397 574 aaPredicted RBP12.47□□□□□ -0.41
SMAD6-201ENST00000288840 PRR25Q96S07 402 aa12.47□□□□□ -0.41
SMAD6-201ENST00000288840 PET117Q6UWS5 81 aa12.47□□□□□ -0.41
SMAD6-201ENST00000288840 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.47□□□□□ -0.41
SMAD6-201ENST00000288840 PTPRBP23467 1997 aa12.46□□□□□ -0.41
SMAD6-201ENST00000288840 SMIM17P0DL12 118 aa12.46□□□□□ -0.41
SMAD6-201ENST00000288840 ESDP10768 282 aa12.46□□□□□ -0.41
SMAD6-201ENST00000288840 PHLDA3Q9Y5J5 127 aa12.46□□□□□ -0.41
SMAD6-201ENST00000288840 SMG1Q96Q15 3661 aaKnown RBP12.46□□□□□ -0.41
SMAD6-201ENST00000288840 HBDP02042 147 aa12.46□□□□□ -0.41
SMAD6-201ENST00000288840 FAM74A4Q5TZK3 123 aa12.46□□□□□ -0.41
SMAD6-201ENST00000288840 CLUHP3Q96NS8 147 aa12.46□□□□□ -0.41
SMAD6-201ENST00000288840 SIGLEC8Q9NYZ4 499 aa12.46□□□□□ -0.41
SMAD6-201ENST00000288840 H3BUT2 72 aa12.46□□□□□ -0.42
SMAD6-201ENST00000288840 NPYP01303 97 aa12.46□□□□□ -0.42
SMAD6-201ENST00000288840 MRPL51Q4U2R6 128 aaKnown RBP12.46□□□□□ -0.42
SMAD6-201ENST00000288840 WIPF2Q8TF74 440 aaPredicted RBP12.46□□□□□ -0.42
SMAD6-201ENST00000288840 RNF5Q99942 180 aa12.46□□□□□ -0.42
SMAD6-201ENST00000288840 ST20Q9HBF5 79 aa12.46□□□□□ -0.42
SMAD6-201ENST00000288840 KLF12Q9Y4X4 402 aa12.46□□□□□ -0.42
SMAD6-201ENST00000288840 LINC01548A6NM66 108 aa12.45□□□□□ -0.42
SMAD6-201ENST00000288840 PRAC2D3DTV9 90 aa12.45□□□□□ -0.42
SMAD6-201ENST00000288840 GNLYP22749 145 aa12.45□□□□□ -0.42
SMAD6-201ENST00000288840 MLST8Q9BVC4 326 aa12.45□□□□□ -0.42
SMAD6-201ENST00000288840 A1L4Q6 167 aa12.45□□□□□ -0.42
SMAD6-201ENST00000288840 C2orf70A6NJV1 201 aa12.45□□□□□ -0.42
SMAD6-201ENST00000288840 ADORA2A-AS1P86434 159 aa12.45□□□□□ -0.42
SMAD6-201ENST00000288840 NDUFA3O95167 84 aa12.45□□□□□ -0.42
SMAD6-201ENST00000288840 FANCD2OSQ96PS1 177 aa12.45□□□□□ -0.42
SMAD6-201ENST00000288840 C7orf69Q9H7B7 122 aa12.45□□□□□ -0.42
SMAD6-201ENST00000288840 Q6AWC8 147 aa12.44□□□□□ -0.42
SMAD6-201ENST00000288840 SFTA2Q6UW10 78 aa12.44□□□□□ -0.42
SMAD6-201ENST00000288840 SPATA12Q7Z6I5 190 aa12.44□□□□□ -0.42
SMAD6-201ENST00000288840 C8orf31Q8N9H6 132 aa12.44□□□□□ -0.42
SMAD6-201ENST00000288840 MAPK1IP1LQ8NDC0 245 aa12.44□□□□□ -0.42
SMAD6-201ENST00000288840 OR10J6PQ8NGY7 276 aa12.44□□□□□ -0.42
SMAD6-201ENST00000288840 HAX1O00165 279 aa12.44□□□□□ -0.42
SMAD6-201ENST00000288840 GTSCR1Q86UQ5 136 aa12.44□□□□□ -0.42
SMAD6-201ENST00000288840 C19orf71A6NCJ1 209 aa12.44□□□□□ -0.42
SMAD6-201ENST00000288840 M0R1W7 72 aa12.44□□□□□ -0.42
SMAD6-201ENST00000288840 RNASE4P34096 147 aaKnown RBP12.44□□□□□ -0.42
SMAD6-201ENST00000288840 CT83Q5H943 113 aa12.44□□□□□ -0.42
SMAD6-201ENST00000288840 GFRA4Q9GZZ7 299 aa12.44□□□□□ -0.42
SMAD6-201ENST00000288840 TMEM14CQ9P0S9 112 aa12.44□□□□□ -0.42
SMAD6-201ENST00000288840 RPS20P60866 119 aaKnown RBP12.43□□□□□ -0.42
SMAD6-201ENST00000288840 FAM104BQ5XKR9 115 aa12.43□□□□□ -0.42
SMAD6-201ENST00000288840 ZNF502Q8TBZ5 544 aa12.43□□□□□ -0.42
SMAD6-201ENST00000288840 COX11Q9Y6N1 276 aa12.43□□□□□ -0.42
SMAD6-201ENST00000288840 CTSGP08311 255 aa12.43□□□□□ -0.42
SMAD6-201ENST00000288840 TMEM97Q5BJF2 176 aa12.43□□□□□ -0.42
SMAD6-201ENST00000288840 TTTY13Q9BZ97 58 aa12.43□□□□□ -0.42
SMAD6-201ENST00000288840 INS-IGF2F8WCM5 200 aa12.43□□□□□ -0.42
SMAD6-201ENST00000288840 NBL1P41271 181 aa12.43□□□□□ -0.42
SMAD6-201ENST00000288840 IGHV7-81A0A0B4J1V7 117 aa12.42□□□□□ -0.42
SMAD6-201ENST00000288840 A6NDN8 102 aa12.42□□□□□ -0.42
SMAD6-201ENST00000288840 KLF5Q13887 457 aaPredicted RBP12.42□□□□□ -0.42
SMAD6-201ENST00000288840 A0A1B0GXF2 115 aa12.42□□□□□ -0.42
SMAD6-201ENST00000288840 CRIP1P50238 77 aa12.42□□□□□ -0.42
SMAD6-201ENST00000288840 LYPD1Q8N2G4 141 aa12.42□□□□□ -0.42
SMAD6-201ENST00000288840 PRSS22Q9GZN4 317 aa12.42□□□□□ -0.42
SMAD6-201ENST00000288840 CCL25O15444 150 aa12.41□□□□□ -0.42
SMAD6-201ENST00000288840 MYCNOSP40205 109 aa12.41□□□□□ -0.42
SMAD6-201ENST00000288840 SCGB1D4Q6XE38 83 aa12.41□□□□□ -0.42
SMAD6-201ENST00000288840 JKAMPQ9P055 326 aa12.41□□□□□ -0.42
SMAD6-201ENST00000288840 MRPS16Q9Y3D3 137 aaKnown RBP12.41□□□□□ -0.42
SMAD6-201ENST00000288840 PAX8Q06710 450 aa12.41□□□□□ -0.42
SMAD6-201ENST00000288840 RNASE8Q8TDE3 154 aaKnown RBP12.41□□□□□ -0.42
SMAD6-201ENST00000288840 SMIM12Q96EX1 92 aa12.41□□□□□ -0.42
SMAD6-201ENST00000288840 DKK2Q9UBU2 259 aa12.41□□□□□ -0.42
SMAD6-201ENST00000288840 IGLV11-55A0A075B6I3 123 aa12.41□□□□□ -0.42
SMAD6-201ENST00000288840 H3BUX3 64 aa12.41□□□□□ -0.42
SMAD6-201ENST00000288840 K7EMI3 77 aa12.41□□□□□ -0.42
SMAD6-201ENST00000288840 NPFFO15130 113 aa12.41□□□□□ -0.42
SMAD6-201ENST00000288840 ZNF80P51504 273 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms