RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 ZNF80P51504 273 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-201ENST00000276573 FOXE3Q13461 319 aa7.31□□□□□ -1.24
TRIM55-201ENST00000276573 TM4SF20Q53R12 229 aa7.31□□□□□ -1.24
TRIM55-201ENST00000276573 SIGLECL1Q8N7X8 197 aa7.31□□□□□ -1.24
TRIM55-201ENST00000276573 C16orf92Q96LL3 132 aa7.31□□□□□ -1.24
TRIM55-201ENST00000276573 NDFIP1Q9BT67 221 aa7.31□□□□□ -1.24
TRIM55-201ENST00000276573 SMPXQ9UHP9 88 aa7.31□□□□□ -1.24
TRIM55-201ENST00000276573 NAV2Q8IVL1 2488 aa7.31□□□□□ -1.24
TRIM55-201ENST00000276573 APCP25054 2843 aa7.3□□□□□ -1.24
TRIM55-201ENST00000276573 SERF1AO75920 110 aa7.3□□□□□ -1.24
TRIM55-201ENST00000276573 RPLP1P05386 114 aaKnown RBP7.3□□□□□ -1.24
TRIM55-201ENST00000276573 ELANEP08246 267 aa7.3□□□□□ -1.24
TRIM55-201ENST00000276573 TEX29Q8N6K0 151 aa7.3□□□□□ -1.24
TRIM55-201ENST00000276573 SSBP4Q9BWG4 385 aaPredicted RBP7.3□□□□□ -1.24
TRIM55-201ENST00000276573 RHPN1-AS1Q9BWJ2 59 aa7.3□□□□□ -1.24
TRIM55-201ENST00000276573 ABCA12Q86UK0 2595 aa7.3□□□□□ -1.24
TRIM55-201ENST00000276573 A0A1B0GUT8 65 aa7.29□□□□□ -1.24
TRIM55-201ENST00000276573 FABP5P3A8MUU1 101 aa7.29□□□□□ -1.24
TRIM55-201ENST00000276573 PAFAH1B2P68402 229 aa7.29□□□□□ -1.24
TRIM55-201ENST00000276573 SRSF2Q01130 221 aaKnown RBP7.29□□□□□ -1.24
TRIM55-201ENST00000276573 RIGQ13278 110 aa7.29□□□□□ -1.24
TRIM55-201ENST00000276573 JOSD1Q15040 202 aaPredicted RBP7.29□□□□□ -1.24
TRIM55-201ENST00000276573 DNLZQ5SXM8 178 aa7.29□□□□□ -1.24
TRIM55-201ENST00000276573 C9orf47Q6ZRZ4 202 aa7.29□□□□□ -1.24
TRIM55-201ENST00000276573 IL17RELQ6ZVW7 336 aa7.29□□□□□ -1.24
TRIM55-201ENST00000276573 MYOZ3Q8TDC0 251 aa7.29□□□□□ -1.24
TRIM55-201ENST00000276573 C20orf173Q96LM9 149 aa7.29□□□□□ -1.24
TRIM55-201ENST00000276573 ALKBH7Q9BT30 221 aaPredicted RBP7.29□□□□□ -1.24
TRIM55-201ENST00000276573 PPP1R14DQ9NXH3 145 aa7.29□□□□□ -1.24
TRIM55-201ENST00000276573 TENM4Q6N022 2769 aa7.29□□□□□ -1.24
TRIM55-201ENST00000276573 SOCS3O14543 225 aa7.29□□□□□ -1.24
TRIM55-201ENST00000276573 ZNF138P52744 262 aa7.29□□□□□ -1.24
TRIM55-201ENST00000276573 RPS20P60866 119 aaKnown RBP7.29□□□□□ -1.24
TRIM55-201ENST00000276573 Q6AWC8 147 aa7.29□□□□□ -1.24
TRIM55-201ENST00000276573 Q8N2B8 174 aa7.29□□□□□ -1.24
TRIM55-201ENST00000276573 DAZ1Q9NQZ3 744 aaKnown RBP7.29□□□□□ -1.24
TRIM55-201ENST00000276573 TMSB15BA0A087X1C1 80 aa7.28□□□□□ -1.24
TRIM55-201ENST00000276573 ARMS2P0C7Q2 107 aa7.28□□□□□ -1.24
TRIM55-201ENST00000276573 KLF5Q13887 457 aaPredicted RBP7.28□□□□□ -1.24
TRIM55-201ENST00000276573 TMEM78Q5T7P6 136 aa7.28□□□□□ -1.24
TRIM55-201ENST00000276573 CDPF1Q6NVV7 123 aa7.28□□□□□ -1.24
TRIM55-201ENST00000276573 ZNF575Q86XF7 245 aa7.28□□□□□ -1.24
TRIM55-201ENST00000276573 RNF152Q8N8N0 203 aa7.28□□□□□ -1.24
TRIM55-201ENST00000276573 C18orf32Q8TCD1 76 aa7.28□□□□□ -1.24
TRIM55-201ENST00000276573 DUX5Q96PT3 197 aa7.28□□□□□ -1.24
TRIM55-201ENST00000276573 FOXC2Q99958 501 aa7.28□□□□□ -1.24
TRIM55-201ENST00000276573 NRN1Q9NPD7 142 aa7.28□□□□□ -1.24
TRIM55-201ENST00000276573 UFC1Q9Y3C8 167 aa7.28□□□□□ -1.24
TRIM55-201ENST00000276573 CSMD2Q7Z408 3487 aa7.28□□□□□ -1.24
TRIM55-201ENST00000276573 ZFHX3Q15911 3703 aa7.28□□□□□ -1.24
TRIM55-201ENST00000276573 DOPEY2Q9Y3R5 2298 aa7.28□□□□□ -1.24
TRIM55-201ENST00000276573 A0A1B0GW15 77 aa7.28□□□□□ -1.24
TRIM55-201ENST00000276573 RPL11P62913 178 aaKnown RBP7.28□□□□□ -1.24
TRIM55-201ENST00000276573 LYZL1Q6UWQ5 148 aa7.28□□□□□ -1.24
TRIM55-201ENST00000276573 TMEM86BQ8N661 226 aa7.28□□□□□ -1.24
TRIM55-201ENST00000276573 GATD1Q8NB37 220 aa7.28□□□□□ -1.24
TRIM55-201ENST00000276573 UBE2E2Q96LR5 201 aa7.28□□□□□ -1.24
TRIM55-201ENST00000276573 GSN-AS1Q9NRJ2 163 aa7.28□□□□□ -1.24
TRIM55-201ENST00000276573 ZANQ9Y493 2812 aa7.28□□□□□ -1.24
TRIM55-201ENST00000276573 OVOL1O14753 267 aa7.27□□□□□ -1.25
TRIM55-201ENST00000276573 ORM1P02763 201 aa7.27□□□□□ -1.25
TRIM55-201ENST00000276573 LGALS1P09382 135 aaKnown RBP7.27□□□□□ -1.25
TRIM55-201ENST00000276573 EDN2P20800 178 aa7.27□□□□□ -1.25
TRIM55-201ENST00000276573 S100A12P80511 92 aa7.27□□□□□ -1.25
TRIM55-201ENST00000276573 ZNF738Q8NE65 137 aa7.27□□□□□ -1.25
TRIM55-201ENST00000276573 BORCS7Q96B45 105 aa7.27□□□□□ -1.25
TRIM55-201ENST00000276573 LINC00477Q96M19 166 aa7.27□□□□□ -1.25
TRIM55-201ENST00000276573 RCHY1Q96PM5 261 aa7.27□□□□□ -1.25
TRIM55-201ENST00000276573 LENEPQ9Y5L5 61 aa7.27□□□□□ -1.25
TRIM55-201ENST00000276573 TEX15Q9BXT5 2789 aa7.26□□□□□ -1.25
TRIM55-201ENST00000276573 LOC102724200A0A096LPH7 203 aaPredicted RBP7.26□□□□□ -1.25
TRIM55-201ENST00000276573 GPX1P07203 203 aa7.26□□□□□ -1.25
TRIM55-201ENST00000276573 ZNF705DP0CH99 300 aaPredicted RBP7.26□□□□□ -1.25
TRIM55-201ENST00000276573 ZNF705BP0CI00 300 aaPredicted RBP7.26□□□□□ -1.25
TRIM55-201ENST00000276573 HIST1H1AQ02539 215 aaPredicted RBP7.26□□□□□ -1.25
TRIM55-201ENST00000276573 KRTAP1-1Q07627 177 aa7.26□□□□□ -1.25
TRIM55-201ENST00000276573 IQCJQ1A5X6 159 aa7.26□□□□□ -1.25
TRIM55-201ENST00000276573 PRR31Q5SQ13 230 aa7.26□□□□□ -1.25
TRIM55-201ENST00000276573 TPPP3Q9BW30 176 aa7.26□□□□□ -1.25
TRIM55-201ENST00000276573 TMEM213A2RRL7 107 aa7.26□□□□□ -1.25
TRIM55-201ENST00000276573 LGALS9O00182 355 aa7.26□□□□□ -1.25
TRIM55-201ENST00000276573 IGLC6P0CF74 106 aa7.26□□□□□ -1.25
TRIM55-201ENST00000276573 LINC01559Q495D7 138 aa7.26□□□□□ -1.25
TRIM55-201ENST00000276573 REC114Q7Z4M0 266 aa7.26□□□□□ -1.25
TRIM55-201ENST00000276573 SAMD10Q9BYL1 202 aa7.26□□□□□ -1.25
TRIM55-201ENST00000276573 IGKV3-7A0A075B6H7 116 aa7.25□□□□□ -1.25
TRIM55-201ENST00000276573 IGHV4OR15-8A0A075B7B6 117 aa7.25□□□□□ -1.25
TRIM55-201ENST00000276573 A0A087WW49 117 aa7.25□□□□□ -1.25
TRIM55-201ENST00000276573 CD5LO43866 347 aa7.25□□□□□ -1.25
TRIM55-201ENST00000276573 SRD5A1P18405 259 aa7.25□□□□□ -1.25
TRIM55-201ENST00000276573 ZNF493Q6ZR52 646 aa7.25□□□□□ -1.25
TRIM55-201ENST00000276573 FER1L6-AS1Q8NA97 138 aa7.25□□□□□ -1.25
TRIM55-201ENST00000276573 OR10J6PQ8NGY7 276 aa7.25□□□□□ -1.25
TRIM55-201ENST00000276573 KCNS1Q96KK3 526 aa7.25□□□□□ -1.25
TRIM55-201ENST00000276573 SELENOKQ9Y6D0 94 aa7.25□□□□□ -1.25
TRIM55-201ENST00000276573 FAM181BA6NEQ2 426 aa7.24□□□□□ -1.25
TRIM55-201ENST00000276573 CTRLP40313 264 aa7.24□□□□□ -1.25
TRIM55-201ENST00000276573 Q6ZWC4 215 aa7.24□□□□□ -1.25
TRIM55-201ENST00000276573 NIT1Q86X76 327 aa7.24□□□□□ -1.25
TRIM55-201ENST00000276573 KLHDC1Q8N7A1 406 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms