RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 SRSF8Q9BRL6 282 aaKnown RBP9.49□□□□□ -0.89
SHPRH-201ENST00000275233 MYLKQ15746 1914 aa9.49□□□□□ -0.89
SHPRH-201ENST00000275233 KIAA1671Q9BY89 1806 aa9.49□□□□□ -0.89
SHPRH-201ENST00000275233 IGHV1OR15-1A0A075B7D0 117 aa9.48□□□□□ -0.89
SHPRH-201ENST00000275233 E9PQ18 207 aa9.48□□□□□ -0.89
SHPRH-201ENST00000275233 MPV17L2Q567V2 206 aa9.48□□□□□ -0.89
SHPRH-201ENST00000275233 ZNF524Q96C55 264 aa9.48□□□□□ -0.89
SHPRH-201ENST00000275233 SNHG12Q9BXW3 62 aa9.48□□□□□ -0.89
SHPRH-201ENST00000275233 TMEM126AQ9H061 195 aa9.48□□□□□ -0.89
SHPRH-201ENST00000275233 PFN1P07737 140 aaKnown RBP9.48□□□□□ -0.89
SHPRH-201ENST00000275233 DLX4Q92988 240 aaPredicted RBP9.48□□□□□ -0.89
SHPRH-201ENST00000275233 TRAV25A0A0B4J276 109 aa9.48□□□□□ -0.89
SHPRH-201ENST00000275233 I3L3M4 83 aa9.48□□□□□ -0.89
SHPRH-201ENST00000275233 KIR3DS1Q14943 382 aa9.48□□□□□ -0.89
SHPRH-201ENST00000275233 CHAC1Q9BUX1 264 aa9.48□□□□□ -0.89
SHPRH-201ENST00000275233 EDA2RQ9HAV5 297 aa9.48□□□□□ -0.89
SHPRH-201ENST00000275233 A0A1B0GW64 132 aa9.47□□□□□ -0.89
SHPRH-201ENST00000275233 IGHV4-59P01825 116 aa9.47□□□□□ -0.89
SHPRH-201ENST00000275233 HOXD3P31249 432 aaPredicted RBP9.47□□□□□ -0.89
SHPRH-201ENST00000275233 Q8TCH9 128 aa9.47□□□□□ -0.89
SHPRH-201ENST00000275233 ZMAT4Q9H898 229 aa9.47□□□□□ -0.89
SHPRH-201ENST00000275233 C9JAW5 83 aa9.47□□□□□ -0.89
SHPRH-201ENST00000275233 LHBP01229 141 aa9.47□□□□□ -0.89
SHPRH-201ENST00000275233 PRSS57Q6UWY2 283 aa9.47□□□□□ -0.89
SHPRH-201ENST00000275233 VWC2Q2TAL6 325 aa9.47□□□□□ -0.89
SHPRH-201ENST00000275233 DEFB112Q30KQ8 113 aa9.47□□□□□ -0.89
SHPRH-201ENST00000275233 USF3Q68DE3 2245 aa9.47□□□□□ -0.89
SHPRH-201ENST00000275233 ANGP03950 147 aaKnown RBP9.47□□□□□ -0.89
SHPRH-201ENST00000275233 PLA2G2CQ5R387 149 aa9.47□□□□□ -0.89
SHPRH-201ENST00000275233 CDKN1BP46527 198 aa9.46□□□□□ -0.89
SHPRH-201ENST00000275233 PDE6HQ13956 83 aa9.46□□□□□ -0.89
SHPRH-201ENST00000275233 NRGNQ92686 78 aa9.46□□□□□ -0.89
SHPRH-201ENST00000275233 ATP6V0BQ99437 205 aa9.46□□□□□ -0.89
SHPRH-201ENST00000275233 FAM215AQ9Y5M1 114 aa9.46□□□□□ -0.89
SHPRH-201ENST00000275233 DOCK11Q5JSL3 2073 aa9.46□□□□□ -0.89
SHPRH-201ENST00000275233 ZNF407Q9C0G0 2248 aa9.46□□□□□ -0.89
SHPRH-201ENST00000275233 IGFL3Q6UXB1 125 aa9.46□□□□□ -0.89
SHPRH-201ENST00000275233 TMEM243Q9BU79 118 aa9.46□□□□□ -0.89
SHPRH-201ENST00000275233 TRBV19A0A075B6N1 114 aa9.46□□□□□ -0.89
SHPRH-201ENST00000275233 ACACAQ13085 2346 aa9.46□□□□□ -0.9
SHPRH-201ENST00000275233 ZNF134P52741 427 aa9.46□□□□□ -0.9
SHPRH-201ENST00000275233 Q6ZS49 121 aa9.46□□□□□ -0.9
SHPRH-201ENST00000275233 F6UB75 175 aa9.46□□□□□ -0.9
SHPRH-201ENST00000275233 HLA-DRB4P13762 266 aa9.46□□□□□ -0.9
SHPRH-201ENST00000275233 HOXB4P17483 251 aaPredicted RBP9.46□□□□□ -0.9
SHPRH-201ENST00000275233 HLA-DRB4X5D2U9 266 aa9.46□□□□□ -0.9
SHPRH-201ENST00000275233 HLA-DMBP28068 263 aa9.46□□□□□ -0.9
SHPRH-201ENST00000275233 TCF15Q12870 199 aa9.46□□□□□ -0.9
SHPRH-201ENST00000275233 LINC01559Q495D7 138 aa9.46□□□□□ -0.9
SHPRH-201ENST00000275233 Q9HAA7 133 aa9.46□□□□□ -0.9
SHPRH-201ENST00000275233 NOP10Q9NPE3 64 aaKnown RBP9.46□□□□□ -0.9
SHPRH-201ENST00000275233 NDUFA4O00483 81 aa9.45□□□□□ -0.9
SHPRH-201ENST00000275233 SPRY2O43597 315 aa9.45□□□□□ -0.9
SHPRH-201ENST00000275233 YPEL3P61236 119 aaPredicted RBP9.45□□□□□ -0.9
SHPRH-201ENST00000275233 KMT2EQ8IZD2 1858 aa9.45□□□□□ -0.9
SHPRH-201ENST00000275233 IGKV1OR2-108A0A075B7D4 117 aa9.45□□□□□ -0.9
SHPRH-201ENST00000275233 HAPLN4Q86UW8 402 aa9.45□□□□□ -0.9
SHPRH-201ENST00000275233 Q6ZQT7 251 aa9.45□□□□□ -0.9
SHPRH-201ENST00000275233 LY96Q9Y6Y9 160 aa9.45□□□□□ -0.9
SHPRH-201ENST00000275233 GAGE2BQ13066 116 aa9.45□□□□□ -0.9
SHPRH-201ENST00000275233 EREGO14944 169 aa9.45□□□□□ -0.9
SHPRH-201ENST00000275233 RSPO3Q9BXY4 272 aaPredicted RBP9.45□□□□□ -0.9
SHPRH-201ENST00000275233 ABCA4P78363 2273 aa9.45□□□□□ -0.9
SHPRH-201ENST00000275233 FNDC10F2Z333 226 aa9.44□□□□□ -0.9
SHPRH-201ENST00000275233 MRPL51Q4U2R6 128 aaKnown RBP9.44□□□□□ -0.9
SHPRH-201ENST00000275233 ZFAND6Q6FIF0 208 aa9.44□□□□□ -0.9
SHPRH-201ENST00000275233 C2orf66Q6UXQ4 117 aa9.44□□□□□ -0.9
SHPRH-201ENST00000275233 FRMPD3Q5JV73 1810 aa9.44□□□□□ -0.9
SHPRH-201ENST00000275233 PRSS29PA6NIE9 313 aa9.44□□□□□ -0.9
SHPRH-201ENST00000275233 SPINK8P0C7L1 97 aa9.44□□□□□ -0.9
SHPRH-201ENST00000275233 LMO1P25800 156 aa9.44□□□□□ -0.9
SHPRH-201ENST00000275233 WT1-ASQ06250 92 aa9.44□□□□□ -0.9
SHPRH-201ENST00000275233 APRG1Q8IVJ8 170 aa9.44□□□□□ -0.9
SHPRH-201ENST00000275233 SDHAF1A6NFY7 115 aa9.44□□□□□ -0.9
SHPRH-201ENST00000275233 PRSS46E5RG02 174 aa9.44□□□□□ -0.9
SHPRH-201ENST00000275233 J3QLI3 93 aa9.44□□□□□ -0.9
SHPRH-201ENST00000275233 SPRNQ5BIV9 151 aa9.44□□□□□ -0.9
SHPRH-201ENST00000275233 PLXNA4Q9HCM2 1894 aa9.44□□□□□ -0.9
SHPRH-201ENST00000275233 C17orf77Q96MU5 243 aa9.44□□□□□ -0.9
SHPRH-201ENST00000275233 IGKV2D-24A0A075B6R9 120 aa9.43□□□□□ -0.9
SHPRH-201ENST00000275233 GFRA4Q9GZZ7 299 aa9.43□□□□□ -0.9
SHPRH-201ENST00000275233 H3BRN7 92 aa9.43□□□□□ -0.9
SHPRH-201ENST00000275233 WT1P19544 449 aaPredicted RBP9.43□□□□□ -0.9
SHPRH-201ENST00000275233 C1orf194Q5T5A4 169 aa9.43□□□□□ -0.9
SHPRH-201ENST00000275233 RHODO00212 210 aa9.43□□□□□ -0.9
SHPRH-201ENST00000275233 DNAJC30Q96LL9 226 aa9.43□□□□□ -0.9
SHPRH-201ENST00000275233 NCOR1O75376 2440 aa9.43□□□□□ -0.9
SHPRH-201ENST00000275233 IGHV7-4-1A0A0J9YVY3 117 aa9.43□□□□□ -0.9
SHPRH-201ENST00000275233 KLF5Q13887 457 aaPredicted RBP9.43□□□□□ -0.9
SHPRH-201ENST00000275233 MRPL27Q9P0M9 148 aaKnown RBP9.43□□□□□ -0.9
SHPRH-201ENST00000275233 CCL24O00175 119 aa9.42□□□□□ -0.9
SHPRH-201ENST00000275233 SCRT2Q9NQ03 307 aa9.42□□□□□ -0.9
SHPRH-201ENST00000275233 ROS1P08922 2347 aa9.42□□□□□ -0.9
SHPRH-201ENST00000275233 GNRH2O43555 120 aa9.42□□□□□ -0.9
SHPRH-201ENST00000275233 LYL1P12980 280 aa9.42□□□□□ -0.9
SHPRH-201ENST00000275233 ADCYAP1P18509 176 aa9.42□□□□□ -0.9
SHPRH-201ENST00000275233 SLURP1P55000 103 aa9.42□□□□□ -0.9
SHPRH-201ENST00000275233 C15orf65H3BRN8 121 aa9.42□□□□□ -0.9
SHPRH-201ENST00000275233 MORN5Q5VZ52 161 aa9.42□□□□□ -0.9
SHPRH-201ENST00000275233 FAM104BQ5XKR9 115 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms