RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 CLPSP04118 112 aa6.48□□□□□ -1.37
LIMD1-201ENST00000273317 PRSS57Q6UWY2 283 aa6.48□□□□□ -1.37
LIMD1-201ENST00000273317 IFITM1P13164 125 aa6.48□□□□□ -1.37
LIMD1-201ENST00000273317 SMIM27A0A1W2PRY6 76 aa6.47□□□□□ -1.37
LIMD1-201ENST00000273317 MST1P26927 711 aa6.47□□□□□ -1.37
LIMD1-201ENST00000273317 FOXL2NBQ6ZUU3 175 aa6.47□□□□□ -1.37
LIMD1-201ENST00000273317 LINC00473A8K010 186 aa6.47□□□□□ -1.37
LIMD1-201ENST00000273317 SLC25A16P16260 332 aa6.47□□□□□ -1.37
LIMD1-201ENST00000273317 PIP4P2Q8N4L2 257 aa6.47□□□□□ -1.37
LIMD1-201ENST00000273317 LIME1Q9H400 295 aa6.47□□□□□ -1.37
LIMD1-201ENST00000273317 POLR3KQ9Y2Y1 108 aaPredicted RBP6.47□□□□□ -1.37
LIMD1-201ENST00000273317 TRAV3A0A0B4J244 114 aa6.47□□□□□ -1.37
LIMD1-201ENST00000273317 PINLYPA6NC86 204 aa6.47□□□□□ -1.37
LIMD1-201ENST00000273317 FGFBP3Q8TAT2 258 aa6.47□□□□□ -1.37
LIMD1-201ENST00000273317 FAM104BQ5XKR9 115 aa6.47□□□□□ -1.37
LIMD1-201ENST00000273317 ZNF664Q8N3J9 261 aa6.47□□□□□ -1.37
LIMD1-201ENST00000273317 TRACP01848 142 aa6.47□□□□□ -1.37
LIMD1-201ENST00000273317 AMN1Q8IY45 258 aa6.47□□□□□ -1.37
LIMD1-201ENST00000273317 NCOR2Q9Y618 2525 aa6.47□□□□□ -1.37
LIMD1-201ENST00000273317 FCN3O75636 299 aa6.47□□□□□ -1.37
LIMD1-201ENST00000273317 C10orf91Q5T1B1 145 aa6.47□□□□□ -1.37
LIMD1-201ENST00000273317 C18orf32Q8TCD1 76 aa6.47□□□□□ -1.37
LIMD1-201ENST00000273317 SIVA1O15304 175 aa6.47□□□□□ -1.37
LIMD1-201ENST00000273317 PSCAO43653 123 aa6.47□□□□□ -1.37
LIMD1-201ENST00000273317 CD24P25063 80 aa6.47□□□□□ -1.37
LIMD1-201ENST00000273317 LINC01356Q8N9X3 169 aa6.47□□□□□ -1.37
LIMD1-201ENST00000273317 UBL5Q9BZL1 73 aa6.47□□□□□ -1.37
LIMD1-201ENST00000273317 CEACAM8P31997 349 aaPredicted RBP6.46□□□□□ -1.37
LIMD1-201ENST00000273317 FAM110DQ8TAY7 271 aaPredicted RBP6.46□□□□□ -1.37
LIMD1-201ENST00000273317 C10orf55Q5SWW7 151 aa6.46□□□□□ -1.37
LIMD1-201ENST00000273317 SPACA3Q8IXA5 215 aa6.46□□□□□ -1.37
LIMD1-201ENST00000273317 NKAPP1Q8N9T2 125 aa6.46□□□□□ -1.37
LIMD1-201ENST00000273317 K7EMI3 77 aa6.46□□□□□ -1.37
LIMD1-201ENST00000273317 TMEM219Q86XT9 240 aa6.46□□□□□ -1.37
LIMD1-201ENST00000273317 RMI2Q96E14 147 aa6.46□□□□□ -1.37
LIMD1-201ENST00000273317 TP53TG1Q9Y2A0 90 aa6.46□□□□□ -1.37
LIMD1-201ENST00000273317 TRBV25-1A0A075B6N4 114 aa6.46□□□□□ -1.38
LIMD1-201ENST00000273317 PSPNO60542 156 aa6.46□□□□□ -1.38
LIMD1-201ENST00000273317 HLA-DMBP28068 263 aa6.46□□□□□ -1.38
LIMD1-201ENST00000273317 MDS2Q8NDY4 140 aa6.46□□□□□ -1.38
LIMD1-201ENST00000273317 TNRC6BQ9UPQ9 1833 aaKnown RBP6.46□□□□□ -1.38
LIMD1-201ENST00000273317 COX8AP10176 69 aa6.46□□□□□ -1.38
LIMD1-201ENST00000273317 CCDC168Q8NDH2 2452 aa6.46□□□□□ -1.38
LIMD1-201ENST00000273317 VWCEQ96DN2 955 aa6.46□□□□□ -1.38
LIMD1-201ENST00000273317 ADAMTS9Q9P2N4 1935 aa6.46□□□□□ -1.38
LIMD1-201ENST00000273317 IGKV1D-17A0A075B6S4 117 aa6.45□□□□□ -1.38
LIMD1-201ENST00000273317 TFF1P04155 84 aa6.45□□□□□ -1.38
LIMD1-201ENST00000273317 A0A087WWL8 130 aa6.45□□□□□ -1.38
LIMD1-201ENST00000273317 SPXQ9BT56 116 aa6.45□□□□□ -1.38
LIMD1-201ENST00000273317 RHPN1-AS1Q9BWJ2 59 aa6.45□□□□□ -1.38
LIMD1-201ENST00000273317 KLHL30-AS1Q8NEE0 82 aa6.45□□□□□ -1.38
LIMD1-201ENST00000273317 SMKR1H3BMG3 65 aa6.45□□□□□ -1.38
LIMD1-201ENST00000273317 HLA-DRB4P13762 266 aa6.45□□□□□ -1.38
LIMD1-201ENST00000273317 ZNF833PQ6ZTB9 187 aa6.45□□□□□ -1.38
LIMD1-201ENST00000273317 HLA-DRB4X5D2U9 266 aa6.45□□□□□ -1.38
LIMD1-201ENST00000273317 BMPERQ8N8U9 685 aa6.45□□□□□ -1.38
LIMD1-201ENST00000273317 THSD7BQ9C0I4 1608 aa6.45□□□□□ -1.38
LIMD1-201ENST00000273317 H3BQ85 93 aa6.45□□□□□ -1.38
LIMD1-201ENST00000273317 TMEM258P61165 79 aa6.45□□□□□ -1.38
LIMD1-201ENST00000273317 DSCR8Q96T75 97 aa6.45□□□□□ -1.38
LIMD1-201ENST00000273317 NDUFA4L2Q9NRX3 87 aa6.45□□□□□ -1.38
LIMD1-201ENST00000273317 MBD3L4A6NDZ8 208 aaPredicted RBP6.44□□□□□ -1.38
LIMD1-201ENST00000273317 MBD3L3A6NE82 208 aaPredicted RBP6.44□□□□□ -1.38
LIMD1-201ENST00000273317 MBD3L5A6NJ08 208 aaPredicted RBP6.44□□□□□ -1.38
LIMD1-201ENST00000273317 RPL35AP18077 110 aaKnown RBP6.44□□□□□ -1.38
LIMD1-201ENST00000273317 MBD3L2Q8NHZ7 208 aaPredicted RBP6.44□□□□□ -1.38
LIMD1-201ENST00000273317 EREGO14944 169 aa6.44□□□□□ -1.38
LIMD1-201ENST00000273317 ADCYAP1P18509 176 aa6.44□□□□□ -1.38
LIMD1-201ENST00000273317 CEND1Q8N111 149 aa6.44□□□□□ -1.38
LIMD1-201ENST00000273317 PYGO2Q9BRQ0 406 aa6.44□□□□□ -1.38
LIMD1-201ENST00000273317 LGALS9BQ3B8N2 356 aa6.44□□□□□ -1.38
LIMD1-201ENST00000273317 LGALS9CQ6DKI2 356 aa6.44□□□□□ -1.38
LIMD1-201ENST00000273317 HS3ST6Q96QI5 342 aa6.44□□□□□ -1.38
LIMD1-201ENST00000273317 TMEM243Q9BU79 118 aa6.44□□□□□ -1.38
LIMD1-201ENST00000273317 TRBV19A0A075B6N1 114 aa6.44□□□□□ -1.38
LIMD1-201ENST00000273317 KLRD1Q13241 179 aa6.44□□□□□ -1.38
LIMD1-201ENST00000273317 H3BUX3 64 aa6.44□□□□□ -1.38
LIMD1-201ENST00000273317 ARMS2P0C7Q2 107 aa6.44□□□□□ -1.38
LIMD1-201ENST00000273317 TCF15Q12870 199 aa6.44□□□□□ -1.38
LIMD1-201ENST00000273317 THAP8Q8NA92 274 aa6.44□□□□□ -1.38
LIMD1-201ENST00000273317 C20orf78Q9BR46 151 aa6.44□□□□□ -1.38
LIMD1-201ENST00000273317 NDPQ00604 133 aa6.44□□□□□ -1.38
LIMD1-201ENST00000273317 RHOHQ15669 191 aa6.44□□□□□ -1.38
LIMD1-201ENST00000273317 HERVK_113P63121 156 aa6.44□□□□□ -1.38
LIMD1-201ENST00000273317 SLAQ13239 276 aa6.44□□□□□ -1.38
LIMD1-201ENST00000273317 ZNF134P52741 427 aa6.44□□□□□ -1.38
LIMD1-201ENST00000273317 A0A1W2PPI3 338 aa6.43□□□□□ -1.38
LIMD1-201ENST00000273317 ZNF561-AS1K7EIQ3 104 aa6.43□□□□□ -1.38
LIMD1-201ENST00000273317 STPG4Q8N801 248 aa6.43□□□□□ -1.38
LIMD1-201ENST00000273317 A0A1W2PPM0 123 aa6.43□□□□□ -1.38
LIMD1-201ENST00000273317 CFHR2P36980 270 aa6.43□□□□□ -1.38
LIMD1-201ENST00000273317 C2orf66Q6UXQ4 117 aa6.43□□□□□ -1.38
LIMD1-201ENST00000273317 WIPF2Q8TF74 440 aaPredicted RBP6.43□□□□□ -1.38
LIMD1-201ENST00000273317 LYNX1G3V0Z9 82 aa6.43□□□□□ -1.38
LIMD1-201ENST00000273317 EFNA2O43921 213 aa6.43□□□□□ -1.38
LIMD1-201ENST00000273317 LYNX1P0DP58 116 aa6.43□□□□□ -1.38
LIMD1-201ENST00000273317 B3GALT5-AS1P59052 145 aa6.43□□□□□ -1.38
LIMD1-201ENST00000273317 MRPL51Q4U2R6 128 aaKnown RBP6.43□□□□□ -1.38
LIMD1-201ENST00000273317 MRPL23Q16540 153 aaKnown RBP6.43□□□□□ -1.38
LIMD1-201ENST00000273317 C17orf82Q86X59 251 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms