RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 TGIF2-C20orf24A0A0A6YYL0 155 aa18.55■□□□□ 0.56
SSBP4-201ENST00000270061 OVOL1O14753 267 aa18.55■□□□□ 0.56
SSBP4-201ENST00000270061 MGST1P10620 155 aaKnown RBP18.55■□□□□ 0.56
SSBP4-201ENST00000270061 FAM231DQ6ZW35 169 aa18.55■□□□□ 0.56
SSBP4-201ENST00000270061 PSG3Q16557 428 aa18.55■□□□□ 0.56
SSBP4-201ENST00000270061 Q86TA4 180 aa18.55■□□□□ 0.56
SSBP4-201ENST00000270061 DLX4Q92988 240 aaPredicted RBP18.55■□□□□ 0.56
SSBP4-201ENST00000270061 BIN3Q9NQY0 253 aa18.55■□□□□ 0.56
SSBP4-201ENST00000270061 CLEC5AQ9NY25 188 aa18.55■□□□□ 0.56
SSBP4-201ENST00000270061 FBLL1A6NHQ2 334 aaKnown RBP18.54■□□□□ 0.56
SSBP4-201ENST00000270061 TM4SF20Q53R12 229 aa18.54■□□□□ 0.56
SSBP4-201ENST00000270061 KCNIP4Q6PIL6 250 aa18.54■□□□□ 0.56
SSBP4-201ENST00000270061 NHLRC2Q8NBF2 726 aa18.54■□□□□ 0.56
SSBP4-201ENST00000270061 SGK494Q96LW2 274 aa18.54■□□□□ 0.56
SSBP4-201ENST00000270061 SMPXQ9UHP9 88 aa18.54■□□□□ 0.56
SSBP4-201ENST00000270061 V9GYV3 84 aa18.54■□□□□ 0.56
SSBP4-201ENST00000270061 LGALS9O00182 355 aa18.53■□□□□ 0.56
SSBP4-201ENST00000270061 INSL3P51460 131 aa18.53■□□□□ 0.56
SSBP4-201ENST00000270061 FLI1Q01543 452 aaPredicted RBP18.53■□□□□ 0.56
SSBP4-201ENST00000270061 DEFB121Q5J5C9 76 aa18.53■□□□□ 0.56
SSBP4-201ENST00000270061 TMEM183AQ8IXX5 376 aa18.53■□□□□ 0.56
SSBP4-201ENST00000270061 ZFP30Q9Y2G7 519 aa18.53■□□□□ 0.56
SSBP4-201ENST00000270061 TRAV8-1A0A0A6YYK1 113 aa18.53■□□□□ 0.56
SSBP4-201ENST00000270061 IBA57Q5T440 356 aaKnown RBP18.53■□□□□ 0.56
SSBP4-201ENST00000270061 MRPL53Q96EL3 112 aaKnown RBP18.53■□□□□ 0.56
SSBP4-201ENST00000270061 FAM210BQ96KR6 192 aa18.53■□□□□ 0.56
SSBP4-201ENST00000270061 RHPN1-AS1Q9BWJ2 59 aa18.53■□□□□ 0.56
SSBP4-201ENST00000270061 CHEK1O14757 476 aa18.52■□□□□ 0.55
SSBP4-201ENST00000270061 RNASE7Q9H1E1 156 aaKnown RBP18.52■□□□□ 0.55
SSBP4-201ENST00000270061 IL36BQ9NZH7 164 aa18.52■□□□□ 0.55
SSBP4-201ENST00000270061 PSG8Q9UQ74 426 aa18.52■□□□□ 0.55
SSBP4-201ENST00000270061 A8MWP6 167 aa18.51■□□□□ 0.55
SSBP4-201ENST00000270061 LCN12Q6JVE5 192 aa18.51■□□□□ 0.55
SSBP4-201ENST00000270061 BTF3L4Q96K17 158 aa18.51■□□□□ 0.55
SSBP4-201ENST00000270061 TRAV8-2A0A0B4J237 113 aa18.5■□□□□ 0.55
SSBP4-201ENST00000270061 BMI1P35226 326 aa18.5■□□□□ 0.55
SSBP4-201ENST00000270061 PRNTQ86SH4 94 aa18.5■□□□□ 0.55
SSBP4-201ENST00000270061 ZNF492Q9P255 531 aa18.5■□□□□ 0.55
SSBP4-201ENST00000270061 COL7A1Q02388 2944 aa18.49■□□□□ 0.55
SSBP4-201ENST00000270061 TRAV9-1A0A075B6T8 112 aa18.49■□□□□ 0.55
SSBP4-201ENST00000270061 SAP30O75446 220 aa18.49■□□□□ 0.55
SSBP4-201ENST00000270061 HLA-DMBP28068 263 aa18.49■□□□□ 0.55
SSBP4-201ENST00000270061 IGFL4Q6B9Z1 124 aa18.49■□□□□ 0.55
SSBP4-201ENST00000270061 MLXQ9UH92 298 aa18.49■□□□□ 0.55
SSBP4-201ENST00000270061 RPS10P46783 165 aaKnown RBP18.48■□□□□ 0.55
SSBP4-201ENST00000270061 TMEM213A2RRL7 107 aa18.47■□□□□ 0.55
SSBP4-201ENST00000270061 RBAKDNA6NC62 111 aa18.47■□□□□ 0.55
SSBP4-201ENST00000270061 C1orf196B1AJZ1 125 aa18.47■□□□□ 0.55
SSBP4-201ENST00000270061 NUDT10Q8NFP7 164 aa18.47■□□□□ 0.55
SSBP4-201ENST00000270061 NUDT11Q96G61 164 aa18.47■□□□□ 0.55
SSBP4-201ENST00000270061 A0A1W2PPQ1 181 aa18.47■□□□□ 0.55
SSBP4-201ENST00000270061 TYMSP04818 313 aa18.47■□□□□ 0.55
SSBP4-201ENST00000270061 FAM3BP58499 235 aaPredicted RBP18.47■□□□□ 0.55
SSBP4-201ENST00000270061 KLF5Q13887 457 aaPredicted RBP18.47■□□□□ 0.55
SSBP4-201ENST00000270061 C19orf71A6NCJ1 209 aa18.46■□□□□ 0.55
SSBP4-201ENST00000270061 ZNF705FA8MVS1 300 aaPredicted RBP18.46■□□□□ 0.55
SSBP4-201ENST00000270061 SOCS3O14543 225 aa18.46■□□□□ 0.55
SSBP4-201ENST00000270061 COX8CQ7Z4L0 72 aa18.46■□□□□ 0.55
SSBP4-201ENST00000270061 C16orf92Q96LL3 132 aa18.46■□□□□ 0.55
SSBP4-201ENST00000270061 PRR25Q96S07 402 aa18.46■□□□□ 0.55
SSBP4-201ENST00000270061 NRN1Q9NPD7 142 aa18.46■□□□□ 0.55
SSBP4-201ENST00000270061 IGKV2-40A0A087WW87 121 aaPredicted RBP18.45■□□□□ 0.54
SSBP4-201ENST00000270061 ZNF705GA8MUZ8 300 aaPredicted RBP18.45■□□□□ 0.54
SSBP4-201ENST00000270061 GATCO43716 136 aaKnown RBP18.45■□□□□ 0.54
SSBP4-201ENST00000270061 IGKV2D-40P01614 121 aaPredicted RBP18.45■□□□□ 0.54
SSBP4-201ENST00000270061 SYNJ2BPP57105 145 aa18.45■□□□□ 0.54
SSBP4-201ENST00000270061 RNF182Q8N6D2 247 aa18.45■□□□□ 0.54
SSBP4-201ENST00000270061 SRD5A3Q9H8P0 318 aa18.45■□□□□ 0.54
SSBP4-201ENST00000270061 ZNF256Q9Y2P7 627 aaPredicted RBP18.45■□□□□ 0.54
SSBP4-201ENST00000270061 SAPCD1Q5SSQ6 148 aa18.45■□□□□ 0.54
SSBP4-201ENST00000270061 PRR27Q6MZM9 219 aa18.45■□□□□ 0.54
SSBP4-201ENST00000270061 DNAH9Q9NYC9 4486 aa18.44■□□□□ 0.54
SSBP4-201ENST00000270061 SMIM27A0A1W2PRY6 76 aa18.44■□□□□ 0.54
SSBP4-201ENST00000270061 RAB5BP61020 215 aa18.44■□□□□ 0.54
SSBP4-201ENST00000270061 SAMD13Q5VXD3 122 aa18.43■□□□□ 0.54
SSBP4-201ENST00000270061 LINC00322Q6ZN03 302 aaPredicted RBP18.43■□□□□ 0.54
SSBP4-201ENST00000270061 TCF24Q7RTU0 167 aa18.42■□□□□ 0.54
SSBP4-201ENST00000270061 VGLL1Q99990 258 aa18.42■□□□□ 0.54
SSBP4-201ENST00000270061 PRAC2D3DTV9 90 aa18.42■□□□□ 0.54
SSBP4-201ENST00000270061 NPIPB6E9PJ23 425 aa18.42■□□□□ 0.54
SSBP4-201ENST00000270061 EDN2P20800 178 aa18.42■□□□□ 0.54
SSBP4-201ENST00000270061 CT83Q5H943 113 aa18.42■□□□□ 0.54
SSBP4-201ENST00000270061 GBGT1Q8N5D6 347 aa18.42■□□□□ 0.54
SSBP4-201ENST00000270061 DAZAP1Q96EP5 407 aaKnown RBP18.42■□□□□ 0.54
SSBP4-201ENST00000270061 ZC2HC1AQ96GY0 325 aa18.42■□□□□ 0.54
SSBP4-201ENST00000270061 RPL11P62913 178 aaKnown RBP18.4■□□□□ 0.54
SSBP4-201ENST00000270061 C2orf70A6NJV1 201 aa18.4■□□□□ 0.54
SSBP4-201ENST00000270061 P01737 135 aa18.4■□□□□ 0.54
SSBP4-201ENST00000270061 PRB4P10163 310 aaPredicted RBP18.4■□□□□ 0.54
SSBP4-201ENST00000270061 CBLN1P23435 193 aa18.4■□□□□ 0.54
SSBP4-201ENST00000270061 OR4B1Q8NGF8 309 aa18.4■□□□□ 0.54
SSBP4-201ENST00000270061 OR9G4Q8NGQ1 327 aa18.4■□□□□ 0.54
SSBP4-201ENST00000270061 RPP21Q9H633 154 aaKnown RBP18.4■□□□□ 0.54
SSBP4-201ENST00000270061 PPP1R14DQ9NXH3 145 aa18.4■□□□□ 0.54
SSBP4-201ENST00000270061 C9orf47Q6ZRZ4 202 aa18.39■□□□□ 0.53
SSBP4-201ENST00000270061 TSKUQ8WUA8 353 aa18.39■□□□□ 0.53
SSBP4-201ENST00000270061 C20orf173Q96LM9 149 aa18.39■□□□□ 0.53
SSBP4-201ENST00000270061 B9D2Q9BPU9 175 aa18.39■□□□□ 0.53
SSBP4-201ENST00000270061 C8orf49Q96NF6 230 aa18.38■□□□□ 0.53
SSBP4-201ENST00000270061 LOC105371267A0A1B0GV96 52 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms