RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 LGALS1P09382 135 aaKnown RBP13.45□□□□□ -0.26
CROCCP3-201ENST00000263511 WT1-ASQ06250 92 aa13.45□□□□□ -0.26
CROCCP3-201ENST00000263511 YLPM1P49750 1951 aaKnown RBP13.45□□□□□ -0.26
CROCCP3-201ENST00000263511 TMEM213A2RRL7 107 aa13.44□□□□□ -0.26
CROCCP3-201ENST00000263511 C9JQL5 133 aa13.44□□□□□ -0.26
CROCCP3-201ENST00000263511 H3BRN7 92 aa13.44□□□□□ -0.26
CROCCP3-201ENST00000263511 IGHV2-70P01814 119 aa13.44□□□□□ -0.26
CROCCP3-201ENST00000263511 IGHV3-16A0A0C4DH30 117 aa13.44□□□□□ -0.26
CROCCP3-201ENST00000263511 GAGE12BA1L429 117 aa13.44□□□□□ -0.26
CROCCP3-201ENST00000263511 GAGE7O76087 117 aa13.44□□□□□ -0.26
CROCCP3-201ENST00000263511 GAGE12FP0CL80 117 aa13.44□□□□□ -0.26
CROCCP3-201ENST00000263511 GAGE12GP0CL81 117 aa13.44□□□□□ -0.26
CROCCP3-201ENST00000263511 GAGE12IP0CL82 117 aa13.44□□□□□ -0.26
CROCCP3-201ENST00000263511 ZNF524Q96C55 264 aa13.44□□□□□ -0.26
CROCCP3-201ENST00000263511 TPSG1Q9NRR2 321 aa13.44□□□□□ -0.26
CROCCP3-201ENST00000263511 TMEM14CQ9P0S9 112 aa13.44□□□□□ -0.26
CROCCP3-201ENST00000263511 MMP23AO75900 390 aa13.43□□□□□ -0.26
CROCCP3-201ENST00000263511 RSPO1Q2MKA7 263 aaPredicted RBP13.43□□□□□ -0.26
CROCCP3-201ENST00000263511 ANAPC13Q9BS18 74 aa13.43□□□□□ -0.26
CROCCP3-201ENST00000263511 I3L3M4 83 aa13.43□□□□□ -0.26
CROCCP3-201ENST00000263511 TP53TG1Q9Y2A0 90 aa13.43□□□□□ -0.26
CROCCP3-201ENST00000263511 MGAMO43451 1857 aa13.43□□□□□ -0.26
CROCCP3-201ENST00000263511 PAX9P55771 341 aa13.43□□□□□ -0.26
CROCCP3-201ENST00000263511 H3BUA1 57 aa13.42□□□□□ -0.26
CROCCP3-201ENST00000263511 IGKV1-39P01597 117 aa13.42□□□□□ -0.26
CROCCP3-201ENST00000263511 IGHV2-5P01817 119 aa13.42□□□□□ -0.26
CROCCP3-201ENST00000263511 IGKV1D-39P04432 117 aa13.42□□□□□ -0.26
CROCCP3-201ENST00000263511 ESDP10768 282 aa13.42□□□□□ -0.26
CROCCP3-201ENST00000263511 ZNF134P52741 427 aa13.42□□□□□ -0.26
CROCCP3-201ENST00000263511 FAM104BQ5XKR9 115 aa13.42□□□□□ -0.26
CROCCP3-201ENST00000263511 PRR25Q96S07 402 aa13.42□□□□□ -0.26
CROCCP3-201ENST00000263511 SHISA9B4DS77 424 aa13.42□□□□□ -0.26
CROCCP3-201ENST00000263511 TMEM141Q96I45 108 aa13.42□□□□□ -0.26
CROCCP3-201ENST00000263511 IGHV7-4-1A0A0J9YVY3 117 aa13.41□□□□□ -0.26
CROCCP3-201ENST00000263511 C2orf66Q6UXQ4 117 aa13.41□□□□□ -0.26
CROCCP3-201ENST00000263511 FAM120AOSQ5T036 256 aa13.41□□□□□ -0.26
CROCCP3-201ENST00000263511 ANXA2RQ3ZCQ2 193 aa13.4□□□□□ -0.26
CROCCP3-201ENST00000263511 MPV17L2Q567V2 206 aa13.4□□□□□ -0.26
CROCCP3-201ENST00000263511 TRAV12-2A0A075B6T6 113 aa13.4□□□□□ -0.26
CROCCP3-201ENST00000263511 C22orf46C9J442 243 aa13.4□□□□□ -0.26
CROCCP3-201ENST00000263511 DIAPH2-AS1Q14236 149 aa13.4□□□□□ -0.26
CROCCP3-201ENST00000263511 VPREB3Q9UKI3 123 aa13.4□□□□□ -0.26
CROCCP3-201ENST00000263511 DNAJC30Q96LL9 226 aa13.4□□□□□ -0.26
CROCCP3-201ENST00000263511 NAA38Q9BRA0 125 aaKnown RBP13.4□□□□□ -0.26
CROCCP3-201ENST00000263511 TMEM243Q9BU79 118 aa13.4□□□□□ -0.26
CROCCP3-201ENST00000263511 CHAC1Q9BUX1 264 aa13.4□□□□□ -0.26
CROCCP3-201ENST00000263511 C2orf82Q6UX34 121 aa13.4□□□□□ -0.27
CROCCP3-201ENST00000263511 NEGR1Q7Z3B1 354 aa13.4□□□□□ -0.27
CROCCP3-201ENST00000263511 Q8N8P6 123 aa13.4□□□□□ -0.27
CROCCP3-201ENST00000263511 ZNRF2Q8NHG8 242 aa13.4□□□□□ -0.27
CROCCP3-201ENST00000263511 A0A087X0K7 114 aa13.39□□□□□ -0.27
CROCCP3-201ENST00000263511 TCF15Q12870 199 aa13.39□□□□□ -0.27
CROCCP3-201ENST00000263511 KLF12Q9Y4X4 402 aa13.39□□□□□ -0.27
CROCCP3-201ENST00000263511 SDHAF1A6NFY7 115 aa13.39□□□□□ -0.27
CROCCP3-201ENST00000263511 IGLC1P0CG04 106 aa13.39□□□□□ -0.27
CROCCP3-201ENST00000263511 IGF2-ASQ6U949 168 aa13.39□□□□□ -0.27
CROCCP3-201ENST00000263511 DEFB112Q30KQ8 113 aa13.39□□□□□ -0.27
CROCCP3-201ENST00000263511 C8orf31Q8N9H6 132 aa13.39□□□□□ -0.27
CROCCP3-201ENST00000263511 NDUFS7O75251 213 aa13.39□□□□□ -0.27
CROCCP3-201ENST00000263511 IGFL2Q6UWQ7 119 aa13.39□□□□□ -0.27
CROCCP3-201ENST00000263511 SNHG12Q9BXW3 62 aa13.39□□□□□ -0.27
CROCCP3-201ENST00000263511 WT1P19544 449 aaPredicted RBP13.38□□□□□ -0.27
CROCCP3-201ENST00000263511 DLX4Q92988 240 aaPredicted RBP13.38□□□□□ -0.27
CROCCP3-201ENST00000263511 POLR3KQ9Y2Y1 108 aaPredicted RBP13.38□□□□□ -0.27
CROCCP3-201ENST00000263511 HOXB4P17483 251 aaPredicted RBP13.38□□□□□ -0.27
CROCCP3-201ENST00000263511 GRNP28799 593 aaKnown RBP13.38□□□□□ -0.27
CROCCP3-201ENST00000263511 RMI2Q96E14 147 aa13.38□□□□□ -0.27
CROCCP3-201ENST00000263511 Q0VG73 95 aa13.38□□□□□ -0.27
CROCCP3-201ENST00000263511 POU2AF1Q16633 256 aa13.38□□□□□ -0.27
CROCCP3-201ENST00000263511 THAP8Q8NA92 274 aa13.38□□□□□ -0.27
CROCCP3-201ENST00000263511 TSSC4Q9Y5U2 329 aaPredicted RBP13.38□□□□□ -0.27
CROCCP3-201ENST00000263511 ATP6V0BQ99437 205 aa13.37□□□□□ -0.27
CROCCP3-201ENST00000263511 ZNF625Q96I27 306 aaPredicted RBP13.37□□□□□ -0.27
CROCCP3-201ENST00000263511 IGLV3-1P01715 115 aa13.37□□□□□ -0.27
CROCCP3-201ENST00000263511 HAPLN4Q86UW8 402 aa13.37□□□□□ -0.27
CROCCP3-201ENST00000263511 KIAA1671Q9BY89 1806 aa13.37□□□□□ -0.27
CROCCP3-201ENST00000263511 PTPRDP23468 1912 aa13.37□□□□□ -0.27
CROCCP3-201ENST00000263511 PMVKQ15126 192 aa13.37□□□□□ -0.27
CROCCP3-201ENST00000263511 C20orf144Q9BQM9 153 aa13.37□□□□□ -0.27
CROCCP3-201ENST00000263511 PLXNA4Q9HCM2 1894 aa13.37□□□□□ -0.27
CROCCP3-201ENST00000263511 K7EM74 188 aa13.36□□□□□ -0.27
CROCCP3-201ENST00000263511 DEFB113Q30KQ7 82 aa13.36□□□□□ -0.27
CROCCP3-201ENST00000263511 CYYR1Q96J86 154 aa13.36□□□□□ -0.27
CROCCP3-201ENST00000263511 IGHV4-59P01825 116 aa13.36□□□□□ -0.27
CROCCP3-201ENST00000263511 FAM231DQ6ZW35 169 aa13.36□□□□□ -0.27
CROCCP3-201ENST00000263511 C10orf91Q5T1B1 145 aa13.36□□□□□ -0.27
CROCCP3-201ENST00000263511 RSPO3Q9BXY4 272 aaPredicted RBP13.36□□□□□ -0.27
CROCCP3-201ENST00000263511 ZMAT4Q9H898 229 aa13.36□□□□□ -0.27
CROCCP3-201ENST00000263511 COX11Q9Y6N1 276 aa13.36□□□□□ -0.27
CROCCP3-201ENST00000263511 TRAV8-3A0A0A6YYJ7 113 aa13.35□□□□□ -0.27
CROCCP3-201ENST00000263511 ZNF114Q8NC26 417 aa13.35□□□□□ -0.27
CROCCP3-201ENST00000263511 CTSZQ9UBR2 303 aa13.35□□□□□ -0.27
CROCCP3-201ENST00000263511 VWC2Q2TAL6 325 aa13.35□□□□□ -0.27
CROCCP3-201ENST00000263511 GAGE6Q13070 117 aa13.35□□□□□ -0.27
CROCCP3-201ENST00000263511 C18orf32Q8TCD1 76 aa13.35□□□□□ -0.27
CROCCP3-201ENST00000263511 SPAG8Q99932 426 aaPredicted RBP13.35□□□□□ -0.27
CROCCP3-201ENST00000263511 HIST1H4AP62805 103 aaKnown RBP13.35□□□□□ -0.27
CROCCP3-201ENST00000263511 NKAPP1Q8N9T2 125 aa13.35□□□□□ -0.27
CROCCP3-201ENST00000263511 VWC2LB2RUY7 222 aa13.34□□□□□ -0.27
CROCCP3-201ENST00000263511 MAJINQ3KP22 176 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms