RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 DEFB125Q8N687 156 aa8.6□□□□□ -1.03
PFDN1-201ENST00000261813 DCANP1Q8TF63 244 aa8.6□□□□□ -1.03
PFDN1-201ENST00000261813 C17orf77Q96MU5 243 aa8.6□□□□□ -1.03
PFDN1-201ENST00000261813 ATG101Q9BSB4 218 aa8.6□□□□□ -1.03
PFDN1-201ENST00000261813 SFTA3P0C7M3 94 aa8.59□□□□□ -1.03
PFDN1-201ENST00000261813 CNN1P51911 297 aaKnown RBP8.59□□□□□ -1.03
PFDN1-201ENST00000261813 SRSF3P84103 164 aaKnown RBP8.59□□□□□ -1.03
PFDN1-201ENST00000261813 SEC11CQ9BY50 192 aa8.59□□□□□ -1.03
PFDN1-201ENST00000261813 A8MZ25 164 aa8.58□□□□□ -1.04
PFDN1-201ENST00000261813 F8W036 122 aa8.58□□□□□ -1.04
PFDN1-201ENST00000261813 H3BTX0 84 aa8.58□□□□□ -1.04
PFDN1-201ENST00000261813 SLC17A3O00476 420 aa8.58□□□□□ -1.04
PFDN1-201ENST00000261813 PEX7O00628 323 aa8.58□□□□□ -1.04
PFDN1-201ENST00000261813 TCRAP04437 139 aa8.58□□□□□ -1.04
PFDN1-201ENST00000261813 SNRPCP09234 159 aaKnown RBP8.58□□□□□ -1.04
PFDN1-201ENST00000261813 AKR1C3P42330 323 aa8.58□□□□□ -1.04
PFDN1-201ENST00000261813 TAS2R60P59551 318 aa8.58□□□□□ -1.04
PFDN1-201ENST00000261813 PSG3Q16557 428 aa8.58□□□□□ -1.04
PFDN1-201ENST00000261813 EXOC3-AS1Q8N2X6 119 aa8.58□□□□□ -1.04
PFDN1-201ENST00000261813 CYB561D1Q8N8Q1 229 aa8.58□□□□□ -1.04
PFDN1-201ENST00000261813 MAP6D1Q9H9H5 199 aa8.58□□□□□ -1.04
PFDN1-201ENST00000261813 RBAKDNA6NC62 111 aa8.57□□□□□ -1.04
PFDN1-201ENST00000261813 ZNF727A8MUV8 499 aa8.57□□□□□ -1.04
PFDN1-201ENST00000261813 DIRC3C9JPN6 131 aa8.57□□□□□ -1.04
PFDN1-201ENST00000261813 SOCS3O14543 225 aa8.57□□□□□ -1.04
PFDN1-201ENST00000261813 FRMD6-AS1P0C7T7 363 aa8.57□□□□□ -1.04
PFDN1-201ENST00000261813 CEBPGP53567 150 aa8.57□□□□□ -1.04
PFDN1-201ENST00000261813 UBE2G1P62253 170 aa8.57□□□□□ -1.04
PFDN1-201ENST00000261813 ZNF124Q15973 351 aa8.57□□□□□ -1.04
PFDN1-201ENST00000261813 APRG1Q8IVJ8 170 aa8.57□□□□□ -1.04
PFDN1-201ENST00000261813 FMC1Q96HJ9 113 aa8.57□□□□□ -1.04
PFDN1-201ENST00000261813 FAM110AQ9BQ89 295 aa8.57□□□□□ -1.04
PFDN1-201ENST00000261813 NIPSNAP3BQ9BS92 247 aa8.57□□□□□ -1.04
PFDN1-201ENST00000261813 SRD5A3Q9H8P0 318 aa8.57□□□□□ -1.04
PFDN1-201ENST00000261813 KLF12Q9Y4X4 402 aa8.57□□□□□ -1.04
PFDN1-201ENST00000261813 HUWE1Q7Z6Z7 4374 aaKnown RBP8.56□□□□□ -1.04
PFDN1-201ENST00000261813 TRAV8-2A0A0B4J237 113 aa8.56□□□□□ -1.04
PFDN1-201ENST00000261813 TRBV6-1A0A0K0K1D8 114 aa8.56□□□□□ -1.04
PFDN1-201ENST00000261813 PRSS47A8MTI9 375 aa8.56□□□□□ -1.04
PFDN1-201ENST00000261813 C9JQL5 133 aa8.56□□□□□ -1.04
PFDN1-201ENST00000261813 LINC00322Q6ZN03 302 aaPredicted RBP8.56□□□□□ -1.04
PFDN1-201ENST00000261813 ZNF738Q8NE65 137 aa8.56□□□□□ -1.04
PFDN1-201ENST00000261813 SMIM12Q96EX1 92 aa8.56□□□□□ -1.04
PFDN1-201ENST00000261813 B9D2Q9BPU9 175 aa8.56□□□□□ -1.04
PFDN1-201ENST00000261813 SMIM7Q9BQ49 75 aa8.56□□□□□ -1.04
PFDN1-201ENST00000261813 TUBA4BQ9H853 241 aa8.56□□□□□ -1.04
PFDN1-201ENST00000261813 LY96Q9Y6Y9 160 aa8.56□□□□□ -1.04
PFDN1-201ENST00000261813 RBMY1BA6NDE4 496 aaKnown RBP8.55□□□□□ -1.04
PFDN1-201ENST00000261813 RBMY1EA6NEQ0 496 aaKnown RBP8.55□□□□□ -1.04
PFDN1-201ENST00000261813 C9JCJ5 164 aa8.55□□□□□ -1.04
PFDN1-201ENST00000261813 RBMY1DP0C7P1 496 aaKnown RBP8.55□□□□□ -1.04
PFDN1-201ENST00000261813 ZNF688P0C7X2 276 aa8.55□□□□□ -1.04
PFDN1-201ENST00000261813 DEFB131AP59861 70 aa8.55□□□□□ -1.04
PFDN1-201ENST00000261813 PNRC1Q12796 327 aaPredicted RBP8.55□□□□□ -1.04
PFDN1-201ENST00000261813 TMEM183BQ1AE95 376 aa8.55□□□□□ -1.04
PFDN1-201ENST00000261813 TMEM241Q24JQ0 296 aa8.55□□□□□ -1.04
PFDN1-201ENST00000261813 C10orf91Q5T1B1 145 aa8.55□□□□□ -1.04
PFDN1-201ENST00000261813 TMEM75Q8N9X5 138 aa8.55□□□□□ -1.04
PFDN1-201ENST00000261813 OR10J6PQ8NGY7 276 aa8.55□□□□□ -1.04
PFDN1-201ENST00000261813 C2CD4CQ8TF44 421 aa8.55□□□□□ -1.04
PFDN1-201ENST00000261813 LINC00052Q96N35 136 aa8.55□□□□□ -1.04
PFDN1-201ENST00000261813 PARLQ9H300 379 aa8.55□□□□□ -1.04
PFDN1-201ENST00000261813 BIN3Q9NQY0 253 aa8.55□□□□□ -1.04
PFDN1-201ENST00000261813 NAT8Q9UHE5 227 aa8.55□□□□□ -1.04
PFDN1-201ENST00000261813 ZFP30Q9Y2G7 519 aa8.55□□□□□ -1.04
PFDN1-201ENST00000261813 CARHSP1Q9Y2V2 147 aaKnown RBP8.55□□□□□ -1.04
PFDN1-201ENST00000261813 M0R3E3 92 aa8.54□□□□□ -1.04
PFDN1-201ENST00000261813 RPL35P42766 123 aaKnown RBP8.54□□□□□ -1.04
PFDN1-201ENST00000261813 GNG4P50150 75 aa8.54□□□□□ -1.04
PFDN1-201ENST00000261813 ZNF674Q2M3X9 581 aa8.54□□□□□ -1.04
PFDN1-201ENST00000261813 SAPCD1Q5SSQ6 148 aa8.54□□□□□ -1.04
PFDN1-201ENST00000261813 EBLN2Q6P2I7 272 aa8.54□□□□□ -1.04
PFDN1-201ENST00000261813 GOLT1AQ6ZVE7 132 aa8.54□□□□□ -1.04
PFDN1-201ENST00000261813 SBSPONQ8IVN8 264 aa8.54□□□□□ -1.04
PFDN1-201ENST00000261813 SVBPQ8N300 66 aa8.54□□□□□ -1.04
PFDN1-201ENST00000261813 ASCL2Q99929 193 aa8.54□□□□□ -1.04
PFDN1-201ENST00000261813 NDFIP1Q9BT67 221 aa8.54□□□□□ -1.04
PFDN1-201ENST00000261813 RPH3ALQ9UNE2 315 aa8.54□□□□□ -1.04
PFDN1-201ENST00000261813 DUSP14O95147 198 aaKnown RBP8.53□□□□□ -1.04
PFDN1-201ENST00000261813 PSMG4Q5JS54 123 aa8.53□□□□□ -1.04
PFDN1-201ENST00000261813 TMEM78Q5T7P6 136 aa8.53□□□□□ -1.04
PFDN1-201ENST00000261813 RNF182Q8N6D2 247 aa8.53□□□□□ -1.04
PFDN1-201ENST00000261813 TVP23CQ96ET8 276 aa8.53□□□□□ -1.04
PFDN1-201ENST00000261813 LINC00477Q96M19 166 aa8.53□□□□□ -1.04
PFDN1-201ENST00000261813 KRTAP9-9Q9BYP9 154 aa8.53□□□□□ -1.04
PFDN1-201ENST00000261813 KRTAP9-4Q9BYQ2 154 aa8.53□□□□□ -1.04
PFDN1-201ENST00000261813 PPP1R14DQ9NXH3 145 aa8.53□□□□□ -1.04
PFDN1-201ENST00000261813 LENEPQ9Y5L5 61 aa8.53□□□□□ -1.04
PFDN1-201ENST00000261813 KMT2CQ8NEZ4 4911 aaKnown RBP8.53□□□□□ -1.04
PFDN1-201ENST00000261813 TRBV7-9A0A0J9YWB2 115 aa8.52□□□□□ -1.05
PFDN1-201ENST00000261813 SNAPINO95295 136 aa8.52□□□□□ -1.05
PFDN1-201ENST00000261813 GNG5P63218 68 aa8.52□□□□□ -1.05
PFDN1-201ENST00000261813 FLI1Q01543 452 aaPredicted RBP8.52□□□□□ -1.05
PFDN1-201ENST00000261813 IGFL4Q6B9Z1 124 aa8.52□□□□□ -1.05
PFDN1-201ENST00000261813 C9orf47Q6ZRZ4 202 aa8.52□□□□□ -1.05
PFDN1-201ENST00000261813 BAGE2Q86Y30 109 aa8.52□□□□□ -1.05
PFDN1-201ENST00000261813 PSG8Q9UQ74 426 aa8.52□□□□□ -1.05
PFDN1-201ENST00000261813 LOC102724200A0A096LPH7 203 aaPredicted RBP8.51□□□□□ -1.05
PFDN1-201ENST00000261813 KNCNA6PVL3 124 aa8.51□□□□□ -1.05
PFDN1-201ENST00000261813 ZNF705FA8MVS1 300 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms