RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 FOXF1Q12946 379 aa2.55□□□□□ -2
CCDC54-201ENST00000261058 ORMDL3Q8N138 153 aa2.55□□□□□ -2
CCDC54-201ENST00000261058 RPP25LQ8N5L8 163 aaKnown RBP2.55□□□□□ -2
CCDC54-201ENST00000261058 C15orf53Q8NAA6 179 aa2.55□□□□□ -2
CCDC54-201ENST00000261058 RMI2Q96E14 147 aa2.55□□□□□ -2
CCDC54-201ENST00000261058 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
CCDC54-201ENST00000261058 C16orf95Q9H693 158 aa2.55□□□□□ -2
CCDC54-201ENST00000261058 DIP2BQ9P265 1576 aa2.55□□□□□ -2
CCDC54-201ENST00000261058 CC2D2AQ9P2K1 1620 aa2.55□□□□□ -2
CCDC54-201ENST00000261058 DENND4CQ5VZ89 1909 aa2.55□□□□□ -2
CCDC54-201ENST00000261058 EFCAB6Q5THR3 1501 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 ARHGEF12Q9NZN5 1544 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 UGGT1Q9NYU2 1555 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 PLXNB3Q9ULL4 1909 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 DIP2CQ9Y2E4 1556 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 RIMBP3CA6NJZ7 1639 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 RIMBP3BA6NNM3 1639 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 RIMBP3Q9UFD9 1639 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 TRAV41A0A0B4J266 112 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 A0A0D9SFI3 127 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 IGHV7-4-1A0A0J9YVY3 117 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 TRBV27A0A0K0K1C4 114 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 MUC21A0A140T8X8 626 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 GRIFINA4D1Z8 144 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 ZNF860A6NHJ4 632 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 H3BUT2 72 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 M0R129 80 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 M0R378 163 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 COX7A2LO14548 114 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 CD7P09564 240 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 COX6A1P12074 109 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 CBLN1P23435 193 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 NPC2P61916 151 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 MOBPQ13875 183 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 TMEM91Q6ZNR0 172 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 LCA10Q71F78 164 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 SIGLECL1Q8N7X8 197 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 WFDC11Q8NEX6 87 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 CMTM2Q8TAZ6 248 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 SND1-IT1Q9HBX3 110 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 ZNF355PQ9NSJ1 428 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 ZNRD1Q9P1U0 126 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 DNAJC15Q9Y5T4 150 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 SCN1AP35498 2009 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 NUP205Q92621 2012 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 WIZO95785 1651 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 DOCK8Q8NF50 2099 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 PPLO60437 1756 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 RALGAPBQ86X10 1494 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 EHBP1L1Q8N3D4 1523 aa2.54□□□□□ -2
CCDC54-201ENST00000261058 IQGAP3Q86VI3 1631 aa2.53□□□□□ -2
CCDC54-201ENST00000261058 RAPGEF6Q8TEU7 1601 aa2.53□□□□□ -2
CCDC54-201ENST00000261058 CFAP43Q8NDM7 1665 aa2.53□□□□□ -2
CCDC54-201ENST00000261058 FXYD6-FXYD2A0A087WZ82 144 aa2.53□□□□□ -2
CCDC54-201ENST00000261058 TRBV7-7A0A0K0K1E9 115 aa2.53□□□□□ -2
CCDC54-201ENST00000261058 RBAKDNA6NC62 111 aa2.53□□□□□ -2
CCDC54-201ENST00000261058 NAP1L6A6NFF2 107 aa2.53□□□□□ -2
CCDC54-201ENST00000261058 A8MWL6 223 aa2.53□□□□□ -2
CCDC54-201ENST00000261058 SYS1-DBNDD2H3BUS1 97 aa2.53□□□□□ -2
CCDC54-201ENST00000261058 BPY2O14599 106 aa2.53□□□□□ -2
CCDC54-201ENST00000261058 CREBL2O60519 120 aaPredicted RBP2.53□□□□□ -2
CCDC54-201ENST00000261058 ZNF737O75373 536 aa2.53□□□□□ -2
CCDC54-201ENST00000261058 DAPP51397 102 aa2.53□□□□□ -2
CCDC54-201ENST00000261058 HBBP68871 147 aa2.53□□□□□ -2
CCDC54-201ENST00000261058 ETDBQ3ZM63 59 aa2.53□□□□□ -2
CCDC54-201ENST00000261058 PHF5AQ7RTV0 110 aaKnown RBP2.53□□□□□ -2
CCDC54-201ENST00000261058 PDPNQ86YL7 162 aa2.53□□□□□ -2
CCDC54-201ENST00000261058 ZNF645Q8N7E2 425 aa2.53□□□□□ -2
CCDC54-201ENST00000261058 DCANP1Q8TF63 244 aa2.53□□□□□ -2
CCDC54-201ENST00000261058 TVP23CQ96ET8 276 aa2.53□□□□□ -2
CCDC54-201ENST00000261058 CHCHD7Q9BUK0 85 aa2.53□□□□□ -2
CCDC54-201ENST00000261058 FGF23Q9GZV9 251 aaPredicted RBP2.53□□□□□ -2
CCDC54-201ENST00000261058 FXYD6Q9H0Q3 95 aa2.53□□□□□ -2
CCDC54-201ENST00000261058 KLK5Q9Y337 293 aaPredicted RBP2.53□□□□□ -2
CCDC54-201ENST00000261058 TMEM14AQ9Y6G1 99 aa2.53□□□□□ -2
CCDC54-201ENST00000261058 EDC4Q6P2E9 1401 aaKnown RBP2.53□□□□□ -2
CCDC54-201ENST00000261058 KIAA0586Q9BVV6 1533 aa2.53□□□□□ -2
CCDC54-201ENST00000261058 CLTCL1P53675 1640 aa2.53□□□□□ -2
CCDC54-201ENST00000261058 HECW1Q76N89 1606 aa2.53□□□□□ -2
CCDC54-201ENST00000261058 PTPN23Q9H3S7 1636 aa2.53□□□□□ -2
CCDC54-201ENST00000261058 POLR1AO95602 1720 aaPredicted RBP2.53□□□□□ -2.01
CCDC54-201ENST00000261058 ITSN1Q15811 1721 aa2.53□□□□□ -2.01
CCDC54-201ENST00000261058 SPHKAPQ2M3C7 1700 aa2.53□□□□□ -2.01
CCDC54-201ENST00000261058 SHANK3Q9BYB0 1731 aa2.53□□□□□ -2.01
CCDC54-201ENST00000261058 MARF1Q9Y4F3 1742 aaKnown RBP2.53□□□□□ -2.01
CCDC54-201ENST00000261058 SBF2Q86WG5 1849 aa2.53□□□□□ -2.01
CCDC54-201ENST00000261058 MYH8P13535 1937 aa2.52□□□□□ -2.01
CCDC54-201ENST00000261058 IGKV1-6A0A0C4DH72 117 aa2.52□□□□□ -2.01
CCDC54-201ENST00000261058 IGLL5B9A064 214 aa2.52□□□□□ -2.01
CCDC54-201ENST00000261058 SDCBPO00560 298 aaPredicted RBP2.52□□□□□ -2.01
CCDC54-201ENST00000261058 ZNF73O43830 326 aaPredicted RBP2.52□□□□□ -2.01
CCDC54-201ENST00000261058 IGKV1-39P01597 117 aa2.52□□□□□ -2.01
CCDC54-201ENST00000261058 IGKV1D-39P04432 117 aa2.52□□□□□ -2.01
CCDC54-201ENST00000261058 SRP19P09132 144 aaKnown RBP2.52□□□□□ -2.01
CCDC54-201ENST00000261058 FAUP35544 74 aaKnown RBP2.52□□□□□ -2.01
CCDC54-201ENST00000261058 WFDC2Q14508 124 aa2.52□□□□□ -2.01
CCDC54-201ENST00000261058 TMEM155Q4W5P6 130 aa2.52□□□□□ -2.01
CCDC54-201ENST00000261058 NMSQ5H8A3 153 aa2.52□□□□□ -2.01
CCDC54-201ENST00000261058 LGALS9CQ6DKI2 356 aa2.52□□□□□ -2.01
CCDC54-201ENST00000261058 SCXQ7RTU7 201 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms