RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 TOMM40O96008 361 aa12.59□□□□□ -0.39
SDCBP-201ENST00000260130 LINC00869P0C866 280 aa12.59□□□□□ -0.39
SDCBP-201ENST00000260130 C1orf194Q5T5A4 169 aa12.59□□□□□ -0.39
SDCBP-201ENST00000260130 MRPL18Q9H0U6 180 aaKnown RBP12.59□□□□□ -0.39
SDCBP-201ENST00000260130 IGKV1D-37A0A075B6S9 117 aa12.58□□□□□ -0.4
SDCBP-201ENST00000260130 IGHV3OR16-13A0A075B7E8 117 aa12.58□□□□□ -0.4
SDCBP-201ENST00000260130 IGHV3-74A0A0B4J1X5 117 aa12.58□□□□□ -0.4
SDCBP-201ENST00000260130 PSG1P11464 419 aa12.58□□□□□ -0.4
SDCBP-201ENST00000260130 CRISP2P16562 243 aa12.58□□□□□ -0.4
SDCBP-201ENST00000260130 ERVFC1-1P60608 527 aa12.58□□□□□ -0.4
SDCBP-201ENST00000260130 MIR17HGQ75NE6 70 aa12.58□□□□□ -0.4
SDCBP-201ENST00000260130 METTL26Q96S19 204 aa12.58□□□□□ -0.4
SDCBP-201ENST00000260130 RNF2Q99496 336 aa12.58□□□□□ -0.4
SDCBP-201ENST00000260130 HELTA6NFD8 242 aa12.57□□□□□ -0.4
SDCBP-201ENST00000260130 SLC17A3O00476 420 aa12.57□□□□□ -0.4
SDCBP-201ENST00000260130 APOHP02749 345 aaPredicted RBP12.57□□□□□ -0.4
SDCBP-201ENST00000260130 ESDP10768 282 aa12.57□□□□□ -0.4
SDCBP-201ENST00000260130 BMI1P35226 326 aa12.57□□□□□ -0.4
SDCBP-201ENST00000260130 GNG4P50150 75 aa12.57□□□□□ -0.4
SDCBP-201ENST00000260130 TAS2R45P59539 299 aa12.57□□□□□ -0.4
SDCBP-201ENST00000260130 RANP62826 216 aaKnown RBP12.57□□□□□ -0.4
SDCBP-201ENST00000260130 PQLC2Q6ZP29 291 aa12.57□□□□□ -0.4
SDCBP-201ENST00000260130 THAP8Q8NA92 274 aa12.57□□□□□ -0.4
SDCBP-201ENST00000260130 IGKV1OR2-108A0A075B7D4 117 aa12.57□□□□□ -0.4
SDCBP-201ENST00000260130 NUPR1O60356 82 aa12.57□□□□□ -0.4
SDCBP-201ENST00000260130 IL4P05112 153 aa12.57□□□□□ -0.4
SDCBP-201ENST00000260130 SNRPCP09234 159 aaKnown RBP12.57□□□□□ -0.4
SDCBP-201ENST00000260130 OR10J4P0C629 311 aa12.57□□□□□ -0.4
SDCBP-201ENST00000260130 CRYBB3P26998 211 aa12.57□□□□□ -0.4
SDCBP-201ENST00000260130 TRGV9Q99603 122 aa12.57□□□□□ -0.4
SDCBP-201ENST00000260130 TGP01266 2768 aa12.57□□□□□ -0.4
SDCBP-201ENST00000260130 KIR2DL5BA0A0G2JN68 375 aa12.56□□□□□ -0.4
SDCBP-201ENST00000260130 KIR2DL5BA0A0G2JPC4 375 aa12.56□□□□□ -0.4
SDCBP-201ENST00000260130 GRIFINA4D1Z8 144 aa12.56□□□□□ -0.4
SDCBP-201ENST00000260130 KIR2DL5AQ8N109 375 aa12.56□□□□□ -0.4
SDCBP-201ENST00000260130 SPAG8Q99932 426 aaPredicted RBP12.56□□□□□ -0.4
SDCBP-201ENST00000260130 V9GYV3 84 aa12.56□□□□□ -0.4
SDCBP-201ENST00000260130 A0A1W2PS18 150 aa12.56□□□□□ -0.4
SDCBP-201ENST00000260130 CD7P09564 240 aa12.56□□□□□ -0.4
SDCBP-201ENST00000260130 COX19Q49B96 90 aa12.56□□□□□ -0.4
SDCBP-201ENST00000260130 CENPWQ5EE01 88 aa12.56□□□□□ -0.4
SDCBP-201ENST00000260130 GNB1LQ9BYB4 327 aa12.56□□□□□ -0.4
SDCBP-201ENST00000260130 IGHV3-66A0A0C4DH42 116 aa12.55□□□□□ -0.4
SDCBP-201ENST00000260130 ZNF705FA8MVS1 300 aaPredicted RBP12.55□□□□□ -0.4
SDCBP-201ENST00000260130 MT-ND6P03923 174 aa12.55□□□□□ -0.4
SDCBP-201ENST00000260130 ZNF705DP0CH99 300 aaPredicted RBP12.55□□□□□ -0.4
SDCBP-201ENST00000260130 ZNF705BP0CI00 300 aaPredicted RBP12.55□□□□□ -0.4
SDCBP-201ENST00000260130 B9D2Q9BPU9 175 aa12.55□□□□□ -0.4
SDCBP-201ENST00000260130 OR5G3P0C626 314 aa12.54□□□□□ -0.4
SDCBP-201ENST00000260130 Q0VG73 95 aa12.54□□□□□ -0.4
SDCBP-201ENST00000260130 WDR73Q6P4I2 378 aa12.54□□□□□ -0.4
SDCBP-201ENST00000260130 OSTCQ9NRP0 149 aa12.54□□□□□ -0.4
SDCBP-201ENST00000260130 SNURFLB1AK76 121 aa12.54□□□□□ -0.4
SDCBP-201ENST00000260130 OR7C2O60412 319 aa12.54□□□□□ -0.4
SDCBP-201ENST00000260130 IGHV4-30-4P0DP06 118 aa12.54□□□□□ -0.4
SDCBP-201ENST00000260130 TCF24Q7RTU0 167 aa12.54□□□□□ -0.4
SDCBP-201ENST00000260130 BAGE3Q86Y29 109 aa12.54□□□□□ -0.4
SDCBP-201ENST00000260130 BAGE2Q86Y30 109 aa12.54□□□□□ -0.4
SDCBP-201ENST00000260130 RNF125Q96EQ8 232 aa12.54□□□□□ -0.4
SDCBP-201ENST00000260130 TP53TG3Q9ULZ0 132 aa12.54□□□□□ -0.4
SDCBP-201ENST00000260130 U3KQE9 123 aa12.54□□□□□ -0.4
SDCBP-201ENST00000260130 A0A1W2PRE2 83 aa12.53□□□□□ -0.4
SDCBP-201ENST00000260130 SERF1AO75920 110 aa12.53□□□□□ -0.4
SDCBP-201ENST00000260130 OR5I1Q13606 314 aa12.53□□□□□ -0.4
SDCBP-201ENST00000260130 OR8I2Q8N0Y5 310 aa12.53□□□□□ -0.4
SDCBP-201ENST00000260130 MRPL32Q9BYC8 188 aaKnown RBP12.53□□□□□ -0.4
SDCBP-201ENST00000260130 RABAC1Q9UI14 185 aa12.53□□□□□ -0.4
SDCBP-201ENST00000260130 DNAH9Q9NYC9 4486 aa12.53□□□□□ -0.4
SDCBP-201ENST00000260130 A8MZ25 164 aa12.53□□□□□ -0.4
SDCBP-201ENST00000260130 GRAMD2BQ96HH9 432 aa12.53□□□□□ -0.4
SDCBP-201ENST00000260130 OR4C46A6NHA9 309 aa12.52□□□□□ -0.4
SDCBP-201ENST00000260130 M0R143 59 aa12.52□□□□□ -0.4
SDCBP-201ENST00000260130 EREGO14944 169 aa12.52□□□□□ -0.4
SDCBP-201ENST00000260130 FRMD6-AS1P0C7T7 363 aa12.52□□□□□ -0.4
SDCBP-201ENST00000260130 NUTF2P61970 127 aaKnown RBP12.52□□□□□ -0.4
SDCBP-201ENST00000260130 IGKV3-7A0A075B6H7 116 aa12.52□□□□□ -0.41
SDCBP-201ENST00000260130 OR11H12B2RN74 326 aa12.52□□□□□ -0.41
SDCBP-201ENST00000260130 ISLRO14498 428 aa12.52□□□□□ -0.41
SDCBP-201ENST00000260130 Q6ZWC4 215 aa12.52□□□□□ -0.41
SDCBP-201ENST00000260130 ZNF503Q96F45 646 aa12.52□□□□□ -0.41
SDCBP-201ENST00000260130 C19orf73Q9NVV2 129 aa12.52□□□□□ -0.41
SDCBP-201ENST00000260130 LINC00310P59036 64 aa12.51□□□□□ -0.41
SDCBP-201ENST00000260130 LYZP61626 148 aa12.51□□□□□ -0.41
SDCBP-201ENST00000260130 RPL11P62913 178 aaKnown RBP12.51□□□□□ -0.41
SDCBP-201ENST00000260130 MRPL52Q86TS9 123 aaKnown RBP12.51□□□□□ -0.41
SDCBP-201ENST00000260130 SAMD10Q9BYL1 202 aa12.51□□□□□ -0.41
SDCBP-201ENST00000260130 C16orf54Q6UWD8 224 aa12.5□□□□□ -0.41
SDCBP-201ENST00000260130 TEX43Q6ZNM6 134 aa12.5□□□□□ -0.41
SDCBP-201ENST00000260130 DEFB125Q8N687 156 aa12.5□□□□□ -0.41
SDCBP-201ENST00000260130 SNHG12Q9BXW3 62 aa12.5□□□□□ -0.41
SDCBP-201ENST00000260130 NAT8BQ9UHF3 227 aa12.5□□□□□ -0.41
SDCBP-201ENST00000260130 GGTLC3B5MD39 225 aa12.5□□□□□ -0.41
SDCBP-201ENST00000260130 TCAPO15273 167 aa12.5□□□□□ -0.41
SDCBP-201ENST00000260130 BUB3O43684 328 aa12.5□□□□□ -0.41
SDCBP-201ENST00000260130 GATA2P23769 480 aaPredicted RBP12.5□□□□□ -0.41
SDCBP-201ENST00000260130 TFPI2P48307 235 aa12.5□□□□□ -0.41
SDCBP-201ENST00000260130 SUMO1P63165 101 aaKnown RBP12.5□□□□□ -0.41
SDCBP-201ENST00000260130 OR10J3Q5JRS4 329 aa12.5□□□□□ -0.41
SDCBP-201ENST00000260130 C20orf144Q9BQM9 153 aa12.5□□□□□ -0.41
SDCBP-201ENST00000260130 WFDC10AQ9H1F0 79 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms