RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 C7orf69Q9H7B7 122 aa11.07□□□□□ -0.64
LIMD2-201ENST00000259006 AP5S1Q9NUS5 200 aa11.07□□□□□ -0.64
LIMD2-201ENST00000259006 FAM27E3Q08E93 113 aa11.07□□□□□ -0.64
LIMD2-201ENST00000259006 RASL11AQ6T310 242 aa11.07□□□□□ -0.64
LIMD2-201ENST00000259006 PIP4P2Q8N4L2 257 aa11.07□□□□□ -0.64
LIMD2-201ENST00000259006 COL6A6A6NMZ7 2263 aa11.07□□□□□ -0.64
LIMD2-201ENST00000259006 IGHV1-46P01743 117 aa11.06□□□□□ -0.64
LIMD2-201ENST00000259006 EVI2AP22794 236 aa11.06□□□□□ -0.64
LIMD2-201ENST00000259006 RBPMS2Q6ZRY4 209 aaKnown RBP11.06□□□□□ -0.64
LIMD2-201ENST00000259006 TRAV25A0A0B4J276 109 aa11.06□□□□□ -0.64
LIMD2-201ENST00000259006 NPIPB6E9PJ23 425 aa11.06□□□□□ -0.64
LIMD2-201ENST00000259006 TCRAP04437 139 aa11.06□□□□□ -0.64
LIMD2-201ENST00000259006 RELNP78509 3460 aa11.06□□□□□ -0.64
LIMD2-201ENST00000259006 RAI1Q7Z5J4 1906 aaPredicted RBP11.06□□□□□ -0.64
LIMD2-201ENST00000259006 ZNF714Q96N38 554 aa11.06□□□□□ -0.64
LIMD2-201ENST00000259006 SLC25A15Q9Y619 301 aa11.06□□□□□ -0.64
LIMD2-201ENST00000259006 LRBAP50851 2863 aa11.06□□□□□ -0.64
LIMD2-201ENST00000259006 LOC107984640A0A0U1RRK4 108 aa11.06□□□□□ -0.64
LIMD2-201ENST00000259006 LHBP01229 141 aa11.05□□□□□ -0.64
LIMD2-201ENST00000259006 IGLV1-44P01699 117 aa11.05□□□□□ -0.64
LIMD2-201ENST00000259006 IFI27P40305 119 aaPredicted RBP11.05□□□□□ -0.64
LIMD2-201ENST00000259006 ARHGAP32A7KAX9 2087 aa11.05□□□□□ -0.64
LIMD2-201ENST00000259006 PTPRQQ9UMZ3 2332 aa11.04□□□□□ -0.64
LIMD2-201ENST00000259006 SMKR1H3BMG3 65 aa11.04□□□□□ -0.64
LIMD2-201ENST00000259006 M0R3E3 92 aa11.04□□□□□ -0.64
LIMD2-201ENST00000259006 SUB1P53999 127 aaKnown RBP eCLIP11.04□□□□□ -0.64
LIMD2-201ENST00000259006 POU2AF1Q16633 256 aa11.04□□□□□ -0.64
LIMD2-201ENST00000259006 ZNF474Q6S9Z5 364 aaPredicted RBP11.04□□□□□ -0.64
LIMD2-201ENST00000259006 LYPD2Q6UXB3 125 aa11.04□□□□□ -0.64
LIMD2-201ENST00000259006 RAB9BQ9NP90 201 aa11.04□□□□□ -0.64
LIMD2-201ENST00000259006 TM4SF5O14894 197 aa11.04□□□□□ -0.64
LIMD2-201ENST00000259006 SMCPP49901 116 aaPredicted RBP11.04□□□□□ -0.64
LIMD2-201ENST00000259006 TGFAP01135 160 aa11.04□□□□□ -0.64
LIMD2-201ENST00000259006 TNFRSF1AP19438 455 aa11.04□□□□□ -0.64
LIMD2-201ENST00000259006 AKAP6Q13023 2319 aa11.04□□□□□ -0.64
LIMD2-201ENST00000259006 TRAV4A0A0B4J268 109 aa11.03□□□□□ -0.64
LIMD2-201ENST00000259006 FSTL3O95633 263 aa11.03□□□□□ -0.64
LIMD2-201ENST00000259006 IFITM1P13164 125 aa11.03□□□□□ -0.64
LIMD2-201ENST00000259006 TMEM200BQ69YZ2 307 aa11.03□□□□□ -0.64
LIMD2-201ENST00000259006 ATP5L2Q7Z4Y8 100 aa11.03□□□□□ -0.64
LIMD2-201ENST00000259006 OR4C13Q8NGP0 309 aa11.03□□□□□ -0.64
LIMD2-201ENST00000259006 MAP1LC3AQ9H492 121 aa11.03□□□□□ -0.64
LIMD2-201ENST00000259006 DKK4Q9UBT3 224 aa11.03□□□□□ -0.64
LIMD2-201ENST00000259006 ASH1LQ9NR48 2969 aaKnown RBP11.03□□□□□ -0.64
LIMD2-201ENST00000259006 IGKV2D-26A0A0A0MRZ7 120 aa11.03□□□□□ -0.64
LIMD2-201ENST00000259006 MLST8Q9BVC4 326 aa11.03□□□□□ -0.64
LIMD2-201ENST00000259006 SOX21Q9Y651 276 aaPredicted RBP11.03□□□□□ -0.64
LIMD2-201ENST00000259006 IGHV3OR16-8A0A075B7F1 116 aa11.02□□□□□ -0.64
LIMD2-201ENST00000259006 TMEM213A2RRL7 107 aa11.02□□□□□ -0.64
LIMD2-201ENST00000259006 H3BVH4 76 aa11.02□□□□□ -0.64
LIMD2-201ENST00000259006 SNCGO76070 127 aa11.02□□□□□ -0.64
LIMD2-201ENST00000259006 CARD19Q96LW7 228 aa11.02□□□□□ -0.64
LIMD2-201ENST00000259006 SMIM9A6NGZ8 99 aa11.02□□□□□ -0.65
LIMD2-201ENST00000259006 RHODO00212 210 aa11.02□□□□□ -0.65
LIMD2-201ENST00000259006 NBL1P41271 181 aa11.02□□□□□ -0.65
LIMD2-201ENST00000259006 C12orf74Q32Q52 190 aa11.02□□□□□ -0.65
LIMD2-201ENST00000259006 SEM1Q6ZVN7 128 aa11.02□□□□□ -0.65
LIMD2-201ENST00000259006 C1orf162Q8NEQ5 155 aaPredicted RBP11.02□□□□□ -0.65
LIMD2-201ENST00000259006 MYCNOSP40205 109 aa11.02□□□□□ -0.65
LIMD2-201ENST00000259006 DKK2Q9UBU2 259 aa11.02□□□□□ -0.65
LIMD2-201ENST00000259006 PSMB2P49721 201 aa11.01□□□□□ -0.65
LIMD2-201ENST00000259006 CEND1Q8N111 149 aa11.01□□□□□ -0.65
LIMD2-201ENST00000259006 ZNF414Q96IQ9 312 aa11.01□□□□□ -0.65
LIMD2-201ENST00000259006 SPTAN1Q13813 2472 aaKnown RBP11.01□□□□□ -0.65
LIMD2-201ENST00000259006 COL27A1Q8IZC6 1860 aaPredicted RBP11.01□□□□□ -0.65
LIMD2-201ENST00000259006 LOC107984156A0A0G2JMH3 177 aa11.01□□□□□ -0.65
LIMD2-201ENST00000259006 A0A1B0GUT8 65 aa11.01□□□□□ -0.65
LIMD2-201ENST00000259006 D6R8Y8 96 aa11.01□□□□□ -0.65
LIMD2-201ENST00000259006 CRLF1O75462 422 aa11.01□□□□□ -0.65
LIMD2-201ENST00000259006 FCN3O75636 299 aa11.01□□□□□ -0.65
LIMD2-201ENST00000259006 ARL17AQ8IVW1 177 aa11.01□□□□□ -0.65
LIMD2-201ENST00000259006 AMN1Q8IY45 258 aa11.01□□□□□ -0.65
LIMD2-201ENST00000259006 NRGNQ92686 78 aa11.01□□□□□ -0.65
LIMD2-201ENST00000259006 PRSS22Q9GZN4 317 aa11.01□□□□□ -0.65
LIMD2-201ENST00000259006 CENPVL3A0A0U1RRI6 287 aa11□□□□□ -0.65
LIMD2-201ENST00000259006 C19orf71A6NCJ1 209 aa11□□□□□ -0.65
LIMD2-201ENST00000259006 PLGLAQ15195 96 aa11□□□□□ -0.65
LIMD2-201ENST00000259006 IGFL4Q6B9Z1 124 aa11□□□□□ -0.65
LIMD2-201ENST00000259006 Q86TA4 180 aa11□□□□□ -0.65
LIMD2-201ENST00000259006 KLF17Q5JT82 389 aaPredicted RBP11□□□□□ -0.65
LIMD2-201ENST00000259006 PPDPFLQ8WWR9 84 aa11□□□□□ -0.65
LIMD2-201ENST00000259006 FMC1Q96HJ9 113 aa11□□□□□ -0.65
LIMD2-201ENST00000259006 C8orf49Q96NF6 230 aa11□□□□□ -0.65
LIMD2-201ENST00000259006 RRN3P1Q2M238 152 aa11□□□□□ -0.65
LIMD2-201ENST00000259006 Q6ZQT7 251 aa11□□□□□ -0.65
LIMD2-201ENST00000259006 ZNF833PQ6ZTB9 187 aa11□□□□□ -0.65
LIMD2-201ENST00000259006 HIGD1AQ9Y241 93 aa11□□□□□ -0.65
LIMD2-201ENST00000259006 TRBV25-1A0A075B6N4 114 aa10.99□□□□□ -0.65
LIMD2-201ENST00000259006 IGHV3-35A0A0C4DH35 117 aa10.99□□□□□ -0.65
LIMD2-201ENST00000259006 LINC00694P0DN24 101 aa10.99□□□□□ -0.65
LIMD2-201ENST00000259006 GP9P14770 177 aa10.99□□□□□ -0.65
LIMD2-201ENST00000259006 COX7A1P24310 79 aa10.99□□□□□ -0.65
LIMD2-201ENST00000259006 VMA21Q3ZAQ7 101 aa10.99□□□□□ -0.65
LIMD2-201ENST00000259006 CFAP126Q5VTH2 177 aa10.99□□□□□ -0.65
LIMD2-201ENST00000259006 TMEM167AQ8TBQ9 72 aa10.99□□□□□ -0.65
LIMD2-201ENST00000259006 FBXL15Q9H469 300 aa10.99□□□□□ -0.65
LIMD2-201ENST00000259006 RPL7P18124 248 aaKnown RBP10.99□□□□□ -0.65
LIMD2-201ENST00000259006 RPL27AP46776 148 aaKnown RBP10.98□□□□□ -0.65
LIMD2-201ENST00000259006 IGLV2-23P01705 113 aa10.98□□□□□ -0.65
LIMD2-201ENST00000259006 IGHG3P01860 377 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms