RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 MYOZ3Q8TDC0 251 aa21.12■□□□□ 0.97
CCM2-201ENST00000258781 INAFM1C9JVW0 142 aa21.11■□□□□ 0.97
CCM2-201ENST00000258781 OR2D3Q8NGH3 330 aa21.11■□□□□ 0.97
CCM2-201ENST00000258781 C8orf49Q96NF6 230 aa21.11■□□□□ 0.97
CCM2-201ENST00000258781 PRR25Q96S07 402 aa21.11■□□□□ 0.97
CCM2-201ENST00000258781 VGLL1Q99990 258 aa21.11■□□□□ 0.97
CCM2-201ENST00000258781 K7EMT4 169 aa21.11■□□□□ 0.97
CCM2-201ENST00000258781 FAM106AQ4KMX7 169 aa21.11■□□□□ 0.97
CCM2-201ENST00000258781 GPHB5Q86YW7 130 aa21.11■□□□□ 0.97
CCM2-201ENST00000258781 RNF182Q8N6D2 247 aa21.11■□□□□ 0.97
CCM2-201ENST00000258781 ASCL2Q99929 193 aa21.11■□□□□ 0.97
CCM2-201ENST00000258781 GPR61Q9BZJ8 451 aa21.11■□□□□ 0.97
CCM2-201ENST00000258781 DAZ1Q9NQZ3 744 aaKnown RBP21.11■□□□□ 0.97
CCM2-201ENST00000258781 IGHV7-4-1A0A0J9YVY3 117 aa21.1■□□□□ 0.97
CCM2-201ENST00000258781 TCF24Q7RTU0 167 aa21.1■□□□□ 0.97
CCM2-201ENST00000258781 RNF152Q8N8N0 203 aa21.1■□□□□ 0.97
CCM2-201ENST00000258781 RPLP1P05386 114 aaKnown RBP21.09■□□□□ 0.97
CCM2-201ENST00000258781 CRIP1P50238 77 aa21.09■□□□□ 0.97
CCM2-201ENST00000258781 GTSF1Q8WW33 167 aa21.09■□□□□ 0.97
CCM2-201ENST00000258781 SMIM6P0DI80 62 aa21.09■□□□□ 0.97
CCM2-201ENST00000258781 S100A2P29034 98 aa21.09■□□□□ 0.97
CCM2-201ENST00000258781 RBPMS2Q6ZRY4 209 aaKnown RBP21.09■□□□□ 0.97
CCM2-201ENST00000258781 RAB4BP61018 213 aa21.08■□□□□ 0.97
CCM2-201ENST00000258781 SCGB2A2Q13296 93 aa21.08■□□□□ 0.97
CCM2-201ENST00000258781 NDFIP1Q9BT67 221 aa21.08■□□□□ 0.97
CCM2-201ENST00000258781 A0A1B0GXF2 115 aa21.07■□□□□ 0.96
CCM2-201ENST00000258781 PRAC2D3DTV9 90 aa21.07■□□□□ 0.96
CCM2-201ENST00000258781 PDZD11Q5EBL8 140 aa21.07■□□□□ 0.96
CCM2-201ENST00000258781 C16orf92Q96LL3 132 aa21.07■□□□□ 0.96
CCM2-201ENST00000258781 FAM181BA6NEQ2 426 aa21.06■□□□□ 0.96
CCM2-201ENST00000258781 LGALS1P09382 135 aaKnown RBP21.06■□□□□ 0.96
CCM2-201ENST00000258781 FOXA3P55318 350 aaPredicted RBP21.06■□□□□ 0.96
CCM2-201ENST00000258781 FAM162BQ5T6X4 162 aa21.06■□□□□ 0.96
CCM2-201ENST00000258781 Q8TAT8 98 aa21.06■□□□□ 0.96
CCM2-201ENST00000258781 C12orf57Q99622 126 aa21.06■□□□□ 0.96
CCM2-201ENST00000258781 UFC1Q9Y3C8 167 aa21.06■□□□□ 0.96
CCM2-201ENST00000258781 TM4SF20Q53R12 229 aa21.05■□□□□ 0.96
CCM2-201ENST00000258781 UBE2E2Q96LR5 201 aa21.05■□□□□ 0.96
CCM2-201ENST00000258781 RHPN1-AS1Q9BWJ2 59 aa21.05■□□□□ 0.96
CCM2-201ENST00000258781 SMPXQ9UHP9 88 aa21.05■□□□□ 0.96
CCM2-201ENST00000258781 CRISP2P16562 243 aa21.04■□□□□ 0.96
CCM2-201ENST00000258781 PGLYRP4Q96LB8 373 aa21.04■□□□□ 0.96
CCM2-201ENST00000258781 SH2D1AO60880 128 aa21.03■□□□□ 0.96
CCM2-201ENST00000258781 HBBP68871 147 aa21.03■□□□□ 0.96
CCM2-201ENST00000258781 HIST1H2BLQ99880 126 aa21.03■□□□□ 0.96
CCM2-201ENST00000258781 SOCS3O14543 225 aa21.03■□□□□ 0.96
CCM2-201ENST00000258781 APCSP02743 223 aa21.03■□□□□ 0.96
CCM2-201ENST00000258781 ERCC8Q13216 396 aa21.03■□□□□ 0.96
CCM2-201ENST00000258781 BMI1P35226 326 aa21.02■□□□□ 0.96
CCM2-201ENST00000258781 GDF5OSQ5U4N7 250 aa21.02■□□□□ 0.96
CCM2-201ENST00000258781 NRN1Q9NPD7 142 aa21.02■□□□□ 0.96
CCM2-201ENST00000258781 GZMBP10144 247 aa21.01■□□□□ 0.95
CCM2-201ENST00000258781 FABP4P15090 132 aa21.01■□□□□ 0.95
CCM2-201ENST00000258781 HILS1P60008 231 aa21.01■□□□□ 0.95
CCM2-201ENST00000258781 Q6AWC8 147 aa21.01■□□□□ 0.95
CCM2-201ENST00000258781 C9orf47Q6ZRZ4 202 aa21.01■□□□□ 0.95
CCM2-201ENST00000258781 ZNF418Q8TF45 676 aaPredicted RBP21.01■□□□□ 0.95
CCM2-201ENST00000258781 Q0VG73 95 aa21.01■□□□□ 0.95
CCM2-201ENST00000258781 PPP1R14DQ9NXH3 145 aa21.01■□□□□ 0.95
CCM2-201ENST00000258781 TMEM78Q5T7P6 136 aa21■□□□□ 0.95
CCM2-201ENST00000258781 REC114Q7Z4M0 266 aa21■□□□□ 0.95
CCM2-201ENST00000258781 OR10D4PQ8NGN7 298 aa21■□□□□ 0.95
CCM2-201ENST00000258781 AGPAT4-IT1Q9H0P7 198 aa21■□□□□ 0.95
CCM2-201ENST00000258781 GRIFINA4D1Z8 144 aa20.99■□□□□ 0.95
CCM2-201ENST00000258781 TMEM189A5PLL7 270 aa20.99■□□□□ 0.95
CCM2-201ENST00000258781 SRSF2Q01130 221 aaKnown RBP20.99■□□□□ 0.95
CCM2-201ENST00000258781 AMBPP02760 352 aa20.98■□□□□ 0.95
CCM2-201ENST00000258781 RNASE1P07998 156 aaKnown RBP20.98■□□□□ 0.95
CCM2-201ENST00000258781 CAMPP49913 170 aa20.98■□□□□ 0.95
CCM2-201ENST00000258781 ZNF138P52744 262 aa20.98■□□□□ 0.95
CCM2-201ENST00000258781 SLAQ13239 276 aa20.98■□□□□ 0.95
CCM2-201ENST00000258781 Q6ZSV7 163 aa20.98■□□□□ 0.95
CCM2-201ENST00000258781 C20orf173Q96LM9 149 aa20.98■□□□□ 0.95
CCM2-201ENST00000258781 A8MWP6 167 aa20.98■□□□□ 0.95
CCM2-201ENST00000258781 HAX1O00165 279 aa20.98■□□□□ 0.95
CCM2-201ENST00000258781 ZNF80P51504 273 aaPredicted RBP20.98■□□□□ 0.95
CCM2-201ENST00000258781 LGALS9O00182 355 aa20.97■□□□□ 0.95
CCM2-201ENST00000258781 RPS20P60866 119 aaKnown RBP20.97■□□□□ 0.95
CCM2-201ENST00000258781 ZNF738Q8NE65 137 aa20.97■□□□□ 0.95
CCM2-201ENST00000258781 PACRGQ96M98 296 aaPredicted RBP20.97■□□□□ 0.95
CCM2-201ENST00000258781 RPL11P62913 178 aaKnown RBP20.96■□□□□ 0.95
CCM2-201ENST00000258781 KIAA1644Q3SXP7 199 aa20.96■□□□□ 0.95
CCM2-201ENST00000258781 OR10J3Q5JRS4 329 aa20.96■□□□□ 0.95
CCM2-201ENST00000258781 SAMD13Q5VXD3 122 aa20.96■□□□□ 0.95
CCM2-201ENST00000258781 KLHDC1Q8N7A1 406 aa20.96■□□□□ 0.95
CCM2-201ENST00000258781 TMEM213A2RRL7 107 aa20.96■□□□□ 0.95
CCM2-201ENST00000258781 OVOL1O14753 267 aa20.96■□□□□ 0.95
CCM2-201ENST00000258781 TMEM256Q8N2U0 113 aa20.96■□□□□ 0.95
CCM2-201ENST00000258781 TP53TG3Q9ULZ0 132 aa20.96■□□□□ 0.95
CCM2-201ENST00000258781 SETD2Q9BYW2 2564 aaPredicted RBP20.95■□□□□ 0.94
CCM2-201ENST00000258781 IGHV4OR15-8A0A075B7B6 117 aa20.95■□□□□ 0.94
CCM2-201ENST00000258781 A0A087WW49 117 aa20.95■□□□□ 0.94
CCM2-201ENST00000258781 A0A1B0GUS0 222 aa20.95■□□□□ 0.94
CCM2-201ENST00000258781 A0A1B0GUT8 65 aa20.95■□□□□ 0.94
CCM2-201ENST00000258781 FABP5P3A8MUU1 101 aa20.95■□□□□ 0.94
CCM2-201ENST00000258781 TMEM18Q96B42 140 aa20.95■□□□□ 0.94
CCM2-201ENST00000258781 A0A1B0GW15 77 aa20.94■□□□□ 0.94
CCM2-201ENST00000258781 LENEPQ9Y5L5 61 aa20.94■□□□□ 0.94
CCM2-201ENST00000258781 ESDP10768 282 aa20.94■□□□□ 0.94
CCM2-201ENST00000258781 SRIP30626 198 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms