RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 TMEM136Q6ZRR5 245 aa7.05□□□□□ -1.28
CKAP2-201ENST00000258607 ZNF414Q96IQ9 312 aa7.05□□□□□ -1.28
CKAP2-201ENST00000258607 IGF2BP2-AS1Q96M15 143 aa7.05□□□□□ -1.28
CKAP2-201ENST00000258607 TXN2Q99757 166 aa7.05□□□□□ -1.28
CKAP2-201ENST00000258607 NRN1Q9NPD7 142 aa7.05□□□□□ -1.28
CKAP2-201ENST00000258607 F8W735 103 aaPredicted RBP7.04□□□□□ -1.28
CKAP2-201ENST00000258607 MGPP08493 103 aa7.04□□□□□ -1.28
CKAP2-201ENST00000258607 SIGLEC15Q6ZMC9 328 aa7.04□□□□□ -1.28
CKAP2-201ENST00000258607 C9JCJ5 164 aa7.04□□□□□ -1.28
CKAP2-201ENST00000258607 RPL7P18124 248 aaKnown RBP7.04□□□□□ -1.28
CKAP2-201ENST00000258607 TMEM242Q9NWH2 141 aa7.04□□□□□ -1.28
CKAP2-201ENST00000258607 H3BVH4 76 aa7.03□□□□□ -1.28
CKAP2-201ENST00000258607 SH2D1AO60880 128 aa7.03□□□□□ -1.28
CKAP2-201ENST00000258607 RNASE4P34096 147 aaKnown RBP7.03□□□□□ -1.28
CKAP2-201ENST00000258607 FOXL1Q12952 345 aa7.03□□□□□ -1.28
CKAP2-201ENST00000258607 NEGR1Q7Z3B1 354 aa7.03□□□□□ -1.28
CKAP2-201ENST00000258607 C5orf56Q8N8D9 126 aa7.03□□□□□ -1.28
CKAP2-201ENST00000258607 EEF1AKMT3Q96AZ1 226 aa7.03□□□□□ -1.28
CKAP2-201ENST00000258607 IGHV3-73A0A0B4J1V6 119 aa7.03□□□□□ -1.28
CKAP2-201ENST00000258607 CRYGCP07315 174 aa7.03□□□□□ -1.28
CKAP2-201ENST00000258607 DPF1Q92782 380 aa7.03□□□□□ -1.28
CKAP2-201ENST00000258607 VAMP8Q9BV40 100 aa7.03□□□□□ -1.28
CKAP2-201ENST00000258607 PRDM13Q9H4Q3 707 aa7.03□□□□□ -1.28
CKAP2-201ENST00000258607 MOB4Q9Y3A3 225 aa7.03□□□□□ -1.28
CKAP2-201ENST00000258607 B4DSR2 109 aa7.03□□□□□ -1.28
CKAP2-201ENST00000258607 TOMM40O96008 361 aa7.03□□□□□ -1.28
CKAP2-201ENST00000258607 CRIP1P50238 77 aa7.03□□□□□ -1.28
CKAP2-201ENST00000258607 HBBP68871 147 aa7.03□□□□□ -1.28
CKAP2-201ENST00000258607 OSTCQ9NRP0 149 aa7.03□□□□□ -1.28
CKAP2-201ENST00000258607 IZUMO1RA6ND01 250 aa7.02□□□□□ -1.29
CKAP2-201ENST00000258607 F5H697 171 aa7.02□□□□□ -1.29
CKAP2-201ENST00000258607 H3BRN7 92 aa7.02□□□□□ -1.29
CKAP2-201ENST00000258607 DDTP30046 118 aa7.02□□□□□ -1.29
CKAP2-201ENST00000258607 C11orf52Q96A22 123 aa7.02□□□□□ -1.29
CKAP2-201ENST00000258607 C19orf24Q9BVV8 132 aa7.02□□□□□ -1.29
CKAP2-201ENST00000258607 OTORQ9NRC9 128 aa7.02□□□□□ -1.29
CKAP2-201ENST00000258607 ZMAT5Q9UDW3 170 aaKnown RBP7.02□□□□□ -1.29
CKAP2-201ENST00000258607 hDV102S1A0JD36 115 aa7.02□□□□□ -1.29
CKAP2-201ENST00000258607 D6R8Y8 96 aa7.02□□□□□ -1.29
CKAP2-201ENST00000258607 TMEM78Q5T7P6 136 aa7.02□□□□□ -1.29
CKAP2-201ENST00000258607 MRPL27Q9P0M9 148 aaKnown RBP7.02□□□□□ -1.29
CKAP2-201ENST00000258607 SMAD5-AS1Q9Y6J3 95 aa7.02□□□□□ -1.29
CKAP2-201ENST00000258607 A0A1W2PS18 150 aa7.02□□□□□ -1.29
CKAP2-201ENST00000258607 NDUFA3O95167 84 aa7.02□□□□□ -1.29
CKAP2-201ENST00000258607 FSTL3O95633 263 aa7.02□□□□□ -1.29
CKAP2-201ENST00000258607 LINC00310P59036 64 aa7.02□□□□□ -1.29
CKAP2-201ENST00000258607 LOXL1Q08397 574 aaPredicted RBP7.02□□□□□ -1.29
CKAP2-201ENST00000258607 SPANXN1Q5VSR9 72 aa7.02□□□□□ -1.29
CKAP2-201ENST00000258607 PVRIGQ6DKI7 326 aa7.02□□□□□ -1.29
CKAP2-201ENST00000258607 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.02□□□□□ -1.29
CKAP2-201ENST00000258607 NIT1Q86X76 327 aa7.02□□□□□ -1.29
CKAP2-201ENST00000258607 C18orf32Q8TCD1 76 aa7.02□□□□□ -1.29
CKAP2-201ENST00000258607 TSKUQ8WUA8 353 aa7.02□□□□□ -1.29
CKAP2-201ENST00000258607 CKS2P33552 79 aa7.01□□□□□ -1.29
CKAP2-201ENST00000258607 PSG3Q16557 428 aa7.01□□□□□ -1.29
CKAP2-201ENST00000258607 PSMG4Q5JS54 123 aa7.01□□□□□ -1.29
CKAP2-201ENST00000258607 MINOS1Q5TGZ0 78 aa7.01□□□□□ -1.29
CKAP2-201ENST00000258607 C8orf86Q6ZUL3 223 aa7.01□□□□□ -1.29
CKAP2-201ENST00000258607 GRAMD2BQ96HH9 432 aa7.01□□□□□ -1.29
CKAP2-201ENST00000258607 RHPN1-AS1Q9BWJ2 59 aa7.01□□□□□ -1.29
CKAP2-201ENST00000258607 MINOS1-NBL1R4GNA1 71 aa7.01□□□□□ -1.29
CKAP2-201ENST00000258607 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.01□□□□□ -1.29
CKAP2-201ENST00000258607 GPX1P07203 203 aa7.01□□□□□ -1.29
CKAP2-201ENST00000258607 C3orf79P0CE67 100 aa7.01□□□□□ -1.29
CKAP2-201ENST00000258607 TAS2R60P59551 318 aa7.01□□□□□ -1.29
CKAP2-201ENST00000258607 TMEM249Q2WGJ8 235 aa7.01□□□□□ -1.29
CKAP2-201ENST00000258607 TXNDC17Q9BRA2 123 aa7.01□□□□□ -1.29
CKAP2-201ENST00000258607 NDFIP1Q9BT67 221 aa7.01□□□□□ -1.29
CKAP2-201ENST00000258607 A0A1B0GUT8 65 aa7□□□□□ -1.29
CKAP2-201ENST00000258607 EREGO14944 169 aa7□□□□□ -1.29
CKAP2-201ENST00000258607 SCGB2A1O75556 95 aa7□□□□□ -1.29
CKAP2-201ENST00000258607 BTF3P20290 206 aaKnown RBP7□□□□□ -1.29
CKAP2-201ENST00000258607 IFI27P40305 119 aaPredicted RBP7□□□□□ -1.29
CKAP2-201ENST00000258607 HINT1P49773 126 aaPredicted RBP7□□□□□ -1.29
CKAP2-201ENST00000258607 RIPPLY3P57055 190 aa7□□□□□ -1.29
CKAP2-201ENST00000258607 FA2HQ7L5A8 372 aa7□□□□□ -1.29
CKAP2-201ENST00000258607 AJUBAQ96IF1 538 aa7□□□□□ -1.29
CKAP2-201ENST00000258607 KLK9Q9UKQ9 250 aa7□□□□□ -1.29
CKAP2-201ENST00000258607 TRAV12-3A0A0B4J271 114 aa7□□□□□ -1.29
CKAP2-201ENST00000258607 HLA-DQA1P01909 254 aa7□□□□□ -1.29
CKAP2-201ENST00000258607 EMP1P54849 157 aa7□□□□□ -1.29
CKAP2-201ENST00000258607 RBPMS2Q6ZRY4 209 aaKnown RBP7□□□□□ -1.29
CKAP2-201ENST00000258607 NPBQ8NG41 125 aa7□□□□□ -1.29
CKAP2-201ENST00000258607 OR10AG1Q8NH19 301 aa7□□□□□ -1.29
CKAP2-201ENST00000258607 PIFOQ8TCI5 191 aa7□□□□□ -1.29
CKAP2-201ENST00000258607 FMC1Q96HJ9 113 aa7□□□□□ -1.29
CKAP2-201ENST00000258607 POLR3KQ9Y2Y1 108 aaPredicted RBP7□□□□□ -1.29
CKAP2-201ENST00000258607 OR5AL1P0C617 328 aa7□□□□□ -1.29
CKAP2-201ENST00000258607 PAX2Q02962 417 aa7□□□□□ -1.29
CKAP2-201ENST00000258607 PRSS57Q6UWY2 283 aa7□□□□□ -1.29
CKAP2-201ENST00000258607 NAA38Q9BRA0 125 aaKnown RBP7□□□□□ -1.29
CKAP2-201ENST00000258607 PYGO2Q9BRQ0 406 aa7□□□□□ -1.29
CKAP2-201ENST00000258607 AGPAT4-IT1Q9H0P7 198 aa7□□□□□ -1.29
CKAP2-201ENST00000258607 YAE1D1Q9NRH1 226 aa7□□□□□ -1.29
CKAP2-201ENST00000258607 A0A087WWL8 130 aa6.99□□□□□ -1.29
CKAP2-201ENST00000258607 KNCNA6PVL3 124 aa6.99□□□□□ -1.29
CKAP2-201ENST00000258607 K7EMI3 77 aa6.99□□□□□ -1.29
CKAP2-201ENST00000258607 IGLC2P0DOY2 106 aa6.99□□□□□ -1.29
CKAP2-201ENST00000258607 SLURP1P55000 103 aa6.99□□□□□ -1.29
CKAP2-201ENST00000258607 JOSD1Q15040 202 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms