RNA–Protein interactions for RNA: ENST00000258418.9

CAB39-201, Transcript of calcium binding protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAB39, Length 3,826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-201ENST00000258418 LINC01548A6NM66 108 aa11.58□□□□□ -0.56
CAB39-201ENST00000258418 EFNA4P52798 201 aa11.58□□□□□ -0.56
CAB39-201ENST00000258418 IGF2-ASQ6U949 168 aa11.58□□□□□ -0.56
CAB39-201ENST00000258418 OR10J6PQ8NGY7 276 aa11.58□□□□□ -0.56
CAB39-201ENST00000258418 C20orf144Q9BQM9 153 aa11.58□□□□□ -0.56
CAB39-201ENST00000258418 IGHV1-24A0A0C4DH33 117 aa11.58□□□□□ -0.56
CAB39-201ENST00000258418 KIR2DL5BA0A0G2JN68 375 aa11.58□□□□□ -0.56
CAB39-201ENST00000258418 KIR2DL5BA0A0G2JPC4 375 aa11.58□□□□□ -0.56
CAB39-201ENST00000258418 LINC00310P59036 64 aa11.58□□□□□ -0.56
CAB39-201ENST00000258418 TEX43Q6ZNM6 134 aa11.58□□□□□ -0.56
CAB39-201ENST00000258418 KIR2DL5AQ8N109 375 aa11.58□□□□□ -0.56
CAB39-201ENST00000258418 FOXC2Q99958 501 aa11.58□□□□□ -0.56
CAB39-201ENST00000258418 RNASE4P34096 147 aaKnown RBP11.57□□□□□ -0.56
CAB39-201ENST00000258418 RAI1Q7Z5J4 1906 aaPredicted RBP11.57□□□□□ -0.56
CAB39-201ENST00000258418 TGFAP01135 160 aa11.57□□□□□ -0.56
CAB39-201ENST00000258418 LEPP41159 167 aa11.57□□□□□ -0.56
CAB39-201ENST00000258418 IL17RELQ6ZVW7 336 aa11.57□□□□□ -0.56
CAB39-201ENST00000258418 ATP5L2Q7Z4Y8 100 aa11.57□□□□□ -0.56
CAB39-201ENST00000258418 PIMREGQ9BSJ6 248 aa11.57□□□□□ -0.56
CAB39-201ENST00000258418 NPFFO15130 113 aa11.57□□□□□ -0.56
CAB39-201ENST00000258418 GATA1P15976 413 aaPredicted RBP11.57□□□□□ -0.56
CAB39-201ENST00000258418 ZNF502Q8TBZ5 544 aa11.56□□□□□ -0.56
CAB39-201ENST00000258418 TRAV26-2A0A0B4J265 109 aa11.56□□□□□ -0.56
CAB39-201ENST00000258418 H3BRN7 92 aa11.56□□□□□ -0.56
CAB39-201ENST00000258418 DNLZQ5SXM8 178 aa11.56□□□□□ -0.56
CAB39-201ENST00000258418 SFTA2Q6UW10 78 aa11.56□□□□□ -0.56
CAB39-201ENST00000258418 MYOZ3Q8TDC0 251 aa11.56□□□□□ -0.56
CAB39-201ENST00000258418 PRSS57Q6UWY2 283 aa11.55□□□□□ -0.56
CAB39-201ENST00000258418 FAM231DQ6ZW35 169 aa11.55□□□□□ -0.56
CAB39-201ENST00000258418 SOX21Q9Y651 276 aaPredicted RBP11.55□□□□□ -0.56
CAB39-201ENST00000258418 TRAV41A0A0B4J266 112 aa11.55□□□□□ -0.56
CAB39-201ENST00000258418 M0R1W7 72 aa11.55□□□□□ -0.56
CAB39-201ENST00000258418 RELNP78509 3460 aa11.55□□□□□ -0.56
CAB39-201ENST00000258418 PRRC2AP48634 2157 aaKnown RBP11.55□□□□□ -0.56
CAB39-201ENST00000258418 PRAC2D3DTV9 90 aa11.55□□□□□ -0.56
CAB39-201ENST00000258418 LTAP01374 205 aa11.55□□□□□ -0.56
CAB39-201ENST00000258418 RPL24P83731 157 aaKnown RBP11.55□□□□□ -0.56
CAB39-201ENST00000258418 PAX8Q06710 450 aa11.55□□□□□ -0.56
CAB39-201ENST00000258418 SIGLEC15Q6ZMC9 328 aa11.55□□□□□ -0.56
CAB39-201ENST00000258418 MRPL27Q9P0M9 148 aaKnown RBP11.54□□□□□ -0.56
CAB39-201ENST00000258418 VWC2LB2RUY7 222 aa11.54□□□□□ -0.56
CAB39-201ENST00000258418 F6UB75 175 aa11.54□□□□□ -0.56
CAB39-201ENST00000258418 LINC00574Q9H8X3 128 aa11.54□□□□□ -0.56
CAB39-201ENST00000258418 NDUFA3O95167 84 aa11.54□□□□□ -0.56
CAB39-201ENST00000258418 TMEM95Q3KNT9 176 aa11.54□□□□□ -0.56
CAB39-201ENST00000258418 IGHV3OR16-12A0A075B7B8 117 aa11.53□□□□□ -0.56
CAB39-201ENST00000258418 IGHV7-81A0A0B4J1V7 117 aa11.53□□□□□ -0.56
CAB39-201ENST00000258418 EGR2P11161 476 aaPredicted RBP11.53□□□□□ -0.56
CAB39-201ENST00000258418 PAX1P15863 534 aa11.53□□□□□ -0.56
CAB39-201ENST00000258418 AMMECR1LQ6DCA0 310 aa11.53□□□□□ -0.56
CAB39-201ENST00000258418 PRR25Q96S07 402 aa11.53□□□□□ -0.56
CAB39-201ENST00000258418 FASNP49327 2511 aaKnown RBP11.53□□□□□ -0.56
CAB39-201ENST00000258418 IFI27L1Q96BM0 104 aa11.53□□□□□ -0.56
CAB39-201ENST00000258418 RNF5Q99942 180 aa11.53□□□□□ -0.56
CAB39-201ENST00000258418 SCGB1D4Q6XE38 83 aa11.53□□□□□ -0.56
CAB39-201ENST00000258418 FANCD2OSQ96PS1 177 aa11.53□□□□□ -0.56
CAB39-201ENST00000258418 JKAMPQ9P055 326 aa11.53□□□□□ -0.56
CAB39-201ENST00000258418 PTPRBP23467 1997 aa11.53□□□□□ -0.56
CAB39-201ENST00000258418 HOXB4P17483 251 aaPredicted RBP11.52□□□□□ -0.56
CAB39-201ENST00000258418 FAM106AQ4KMX7 169 aa11.52□□□□□ -0.56
CAB39-201ENST00000258418 ARL6IP6Q8N6S5 226 aa11.52□□□□□ -0.56
CAB39-201ENST00000258418 OVOL3O00110 214 aa11.52□□□□□ -0.57
CAB39-201ENST00000258418 NPYP01303 97 aa11.52□□□□□ -0.57
CAB39-201ENST00000258418 ZNF688P0C7X2 276 aa11.52□□□□□ -0.57
CAB39-201ENST00000258418 C12orf54Q6X4T0 127 aa11.52□□□□□ -0.57
CAB39-201ENST00000258418 PSMB11A5LHX3 300 aa11.51□□□□□ -0.57
CAB39-201ENST00000258418 CTSGP08311 255 aa11.51□□□□□ -0.57
CAB39-201ENST00000258418 EMP1P54849 157 aa11.51□□□□□ -0.57
CAB39-201ENST00000258418 GTSCR1Q86UQ5 136 aa11.51□□□□□ -0.57
CAB39-201ENST00000258418 HBDP02042 147 aa11.51□□□□□ -0.57
CAB39-201ENST00000258418 CRYGCP07315 174 aa11.51□□□□□ -0.57
CAB39-201ENST00000258418 MRPL51Q4U2R6 128 aaKnown RBP11.51□□□□□ -0.57
CAB39-201ENST00000258418 RPS20P60866 119 aaKnown RBP11.5□□□□□ -0.57
CAB39-201ENST00000258418 C14orf178Q8N769 122 aaPredicted RBP11.5□□□□□ -0.57
CAB39-201ENST00000258418 CHCHD1Q96BP2 118 aaKnown RBP11.5□□□□□ -0.57
CAB39-201ENST00000258418 GAGE10A6NGK3 116 aa11.5□□□□□ -0.57
CAB39-201ENST00000258418 C19orf84I3L1E1 186 aa11.5□□□□□ -0.57
CAB39-201ENST00000258418 LOXL1Q08397 574 aaPredicted RBP11.5□□□□□ -0.57
CAB39-201ENST00000258418 MINOS1Q5TGZ0 78 aa11.5□□□□□ -0.57
CAB39-201ENST00000258418 RASL11AQ6T310 242 aa11.5□□□□□ -0.57
CAB39-201ENST00000258418 DPF1Q92782 380 aa11.5□□□□□ -0.57
CAB39-201ENST00000258418 MINOS1-NBL1R4GNA1 71 aa11.5□□□□□ -0.57
CAB39-201ENST00000258418 BLCAPP62952 87 aa11.5□□□□□ -0.57
CAB39-201ENST00000258418 TMEM97Q5BJF2 176 aa11.5□□□□□ -0.57
CAB39-201ENST00000258418 SIGLEC8Q9NYZ4 499 aa11.5□□□□□ -0.57
CAB39-201ENST00000258418 ZNF492Q9P255 531 aa11.5□□□□□ -0.57
CAB39-201ENST00000258418 IGHV2-70DA0A0C4DH43 119 aa11.49□□□□□ -0.57
CAB39-201ENST00000258418 H3BUT2 72 aa11.49□□□□□ -0.57
CAB39-201ENST00000258418 PRB1P04280 392 aa11.49□□□□□ -0.57
CAB39-201ENST00000258418 FOXE3Q13461 319 aa11.49□□□□□ -0.57
CAB39-201ENST00000258418 ZNF256Q9Y2P7 627 aaPredicted RBP11.49□□□□□ -0.57
CAB39-201ENST00000258418 SMAD7O15105 426 aaKnown RBP11.49□□□□□ -0.57
CAB39-201ENST00000258418 TTTY13Q9BZ97 58 aa11.49□□□□□ -0.57
CAB39-201ENST00000258418 IGHV4-61A0A0C4DH41 118 aa11.49□□□□□ -0.57
CAB39-201ENST00000258418 NEGR1Q7Z3B1 354 aa11.49□□□□□ -0.57
CAB39-201ENST00000258418 OR11H6Q8NGC7 330 aa11.49□□□□□ -0.57
CAB39-201ENST00000258418 WIPF2Q8TF74 440 aaPredicted RBP11.49□□□□□ -0.57
CAB39-201ENST00000258418 MBD6Q96DN6 1003 aa11.49□□□□□ -0.57
CAB39-201ENST00000258418 IGLV11-55A0A075B6I3 123 aa11.48□□□□□ -0.57
CAB39-201ENST00000258418 UBE2E1P51965 193 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms