RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 TMEM263Q8WUH6 116 aaKnown RBP16.25■□□□□ 0.19
LSM4-201ENST00000252816 DNAH6Q9C0G6 4158 aa16.25■□□□□ 0.19
LSM4-201ENST00000252816 KLLNB2CW77 178 aa16.24■□□□□ 0.19
LSM4-201ENST00000252816 DEFB130BP0DP73 79 aa16.24■□□□□ 0.19
LSM4-201ENST00000252816 DEFB130AP0DP74 79 aa16.24■□□□□ 0.19
LSM4-201ENST00000252816 HSD17B11Q8NBQ5 300 aa16.24■□□□□ 0.19
LSM4-201ENST00000252816 Q9H3A6 140 aa16.24■□□□□ 0.19
LSM4-201ENST00000252816 RNF222A6NCQ9 220 aa16.23■□□□□ 0.19
LSM4-201ENST00000252816 SLC25A5P05141 298 aaKnown RBP16.23■□□□□ 0.19
LSM4-201ENST00000252816 CD300CQ08708 224 aa16.23■□□□□ 0.19
LSM4-201ENST00000252816 LYPD1Q8N2G4 141 aa16.23■□□□□ 0.19
LSM4-201ENST00000252816 OR2T35Q8NGX2 323 aa16.23■□□□□ 0.19
LSM4-201ENST00000252816 TIMM8BQ9Y5J9 83 aaPredicted RBP16.23■□□□□ 0.19
LSM4-201ENST00000252816 FXYD6-FXYD2A0A087WZ82 144 aa16.22■□□□□ 0.19
LSM4-201ENST00000252816 C7orf71A4D174 169 aa16.22■□□□□ 0.19
LSM4-201ENST00000252816 G3V3Q6 166 aa16.22■□□□□ 0.19
LSM4-201ENST00000252816 CRISP2P16562 243 aa16.22■□□□□ 0.19
LSM4-201ENST00000252816 ATP6V0CP27449 155 aa16.22■□□□□ 0.19
LSM4-201ENST00000252816 BTN1A1Q13410 526 aa16.22■□□□□ 0.19
LSM4-201ENST00000252816 OR10G4Q8NGN3 311 aa16.22■□□□□ 0.19
LSM4-201ENST00000252816 OR10G9Q8NGN4 311 aa16.22■□□□□ 0.19
LSM4-201ENST00000252816 OR10G7Q8NGN6 311 aa16.22■□□□□ 0.19
LSM4-201ENST00000252816 FAM210BQ96KR6 192 aa16.22■□□□□ 0.19
LSM4-201ENST00000252816 NOP10Q9NPE3 64 aaKnown RBP16.22■□□□□ 0.19
LSM4-201ENST00000252816 A0A1W2PPV4 95 aa16.21■□□□□ 0.19
LSM4-201ENST00000252816 HMGB3O15347 200 aaKnown RBP16.21■□□□□ 0.19
LSM4-201ENST00000252816 ZNF324O75467 553 aaPredicted RBP16.21■□□□□ 0.19
LSM4-201ENST00000252816 TMEM78Q5T7P6 136 aa16.21■□□□□ 0.19
LSM4-201ENST00000252816 PRR9Q5T870 116 aa16.21■□□□□ 0.19
LSM4-201ENST00000252816 CCDC28AQ8IWP9 274 aa16.21■□□□□ 0.19
LSM4-201ENST00000252816 ZFAND2AQ8N6M9 145 aa16.21■□□□□ 0.19
LSM4-201ENST00000252816 INO80EQ8NBZ0 244 aaPredicted RBP16.21■□□□□ 0.19
LSM4-201ENST00000252816 OR2G3Q8NGZ4 309 aa16.21■□□□□ 0.19
LSM4-201ENST00000252816 PSMG3Q9BT73 122 aaPredicted RBP16.21■□□□□ 0.19
LSM4-201ENST00000252816 ZNF492Q9P255 531 aa16.21■□□□□ 0.19
LSM4-201ENST00000252816 TNFSF18Q9UNG2 199 aa16.21■□□□□ 0.19
LSM4-201ENST00000252816 RNASE4P34096 147 aaKnown RBP16.2■□□□□ 0.18
LSM4-201ENST00000252816 TMEM88Q6PEY1 159 aa16.2■□□□□ 0.18
LSM4-201ENST00000252816 PQLC2Q6ZP29 291 aa16.2■□□□□ 0.18
LSM4-201ENST00000252816 Q8TAT8 98 aa16.2■□□□□ 0.18
LSM4-201ENST00000252816 PYGO2Q9BRQ0 406 aa16.2■□□□□ 0.18
LSM4-201ENST00000252816 SH3BGRL3Q9H299 93 aa16.2■□□□□ 0.18
LSM4-201ENST00000252816 DNAH10Q8IVF4 4471 aa16.19■□□□□ 0.18
LSM4-201ENST00000252816 CSN1S1P47710 185 aa16.19■□□□□ 0.18
LSM4-201ENST00000252816 GPX1P07203 203 aa16.18■□□□□ 0.18
LSM4-201ENST00000252816 NMBP08949 121 aa16.18■□□□□ 0.18
LSM4-201ENST00000252816 ZNF138P52744 262 aa16.18■□□□□ 0.18
LSM4-201ENST00000252816 RPL7L1Q6DKI1 246 aaKnown RBP16.18■□□□□ 0.18
LSM4-201ENST00000252816 Q6ZQT7 251 aa16.18■□□□□ 0.18
LSM4-201ENST00000252816 FRAS1Q86XX4 4008 aa16.17■□□□□ 0.18
LSM4-201ENST00000252816 RBAKDNA6NC62 111 aa16.17■□□□□ 0.18
LSM4-201ENST00000252816 CBY3A6NI87 242 aa16.17■□□□□ 0.18
LSM4-201ENST00000252816 DIRC3C9JPN6 131 aa16.17■□□□□ 0.18
LSM4-201ENST00000252816 P0DMU3 169 aa16.17■□□□□ 0.18
LSM4-201ENST00000252816 FAM231AP0DMU4 169 aa16.17■□□□□ 0.18
LSM4-201ENST00000252816 FAM231CP0DMU5 169 aa16.17■□□□□ 0.18
LSM4-201ENST00000252816 CDC34P49427 236 aaPredicted RBP16.17■□□□□ 0.18
LSM4-201ENST00000252816 LINC00612Q8N6U2 182 aa16.17■□□□□ 0.18
LSM4-201ENST00000252816 HYLS1Q96M11 299 aa16.17■□□□□ 0.18
LSM4-201ENST00000252816 OTORQ9NRC9 128 aa16.17■□□□□ 0.18
LSM4-201ENST00000252816 PGPA6NDG6 321 aa16.16■□□□□ 0.18
LSM4-201ENST00000252816 ARL14EPLP0DKL9 152 aa16.16■□□□□ 0.18
LSM4-201ENST00000252816 SERF2P84101 59 aa16.16■□□□□ 0.18
LSM4-201ENST00000252816 F5H768 121 aa16.15■□□□□ 0.18
LSM4-201ENST00000252816 ATP5G1P05496 136 aa16.15■□□□□ 0.18
LSM4-201ENST00000252816 STAG3L2P0CL84 134 aa16.15■□□□□ 0.18
LSM4-201ENST00000252816 STAG3L3P0CL85 134 aa16.15■□□□□ 0.18
LSM4-201ENST00000252816 ATP5G3P48201 142 aa16.15■□□□□ 0.18
LSM4-201ENST00000252816 POM121L12Q8N7R1 296 aa16.15■□□□□ 0.18
LSM4-201ENST00000252816 RXFP4Q8TDU9 374 aa16.15■□□□□ 0.18
LSM4-201ENST00000252816 RAB24Q969Q5 203 aa16.15■□□□□ 0.18
LSM4-201ENST00000252816 LINC00467Q9BRT7 94 aa16.15■□□□□ 0.18
LSM4-201ENST00000252816 TRBV7-9A0A0J9YWB2 115 aa16.14■□□□□ 0.17
LSM4-201ENST00000252816 SNURFLB1AK76 121 aa16.14■□□□□ 0.17
LSM4-201ENST00000252816 C11orf72Q8NBR9 251 aa16.14■□□□□ 0.17
LSM4-201ENST00000252816 SMLR1H3BR10 107 aa16.13■□□□□ 0.17
LSM4-201ENST00000252816 MBP02144 154 aa16.13■□□□□ 0.17
LSM4-201ENST00000252816 EIF4E3Q8N5X7 224 aaKnown RBP16.13■□□□□ 0.17
LSM4-201ENST00000252816 GSN-AS1Q9NRJ2 163 aa16.13■□□□□ 0.17
LSM4-201ENST00000252816 BORCS7-ASMTA0A0B4J1R7 106 aa16.12■□□□□ 0.17
LSM4-201ENST00000252816 GAGE12BA1L429 117 aa16.12■□□□□ 0.17
LSM4-201ENST00000252816 GAGE7O76087 117 aa16.12■□□□□ 0.17
LSM4-201ENST00000252816 GAGE12FP0CL80 117 aa16.12■□□□□ 0.17
LSM4-201ENST00000252816 GAGE12GP0CL81 117 aa16.12■□□□□ 0.17
LSM4-201ENST00000252816 GAGE12IP0CL82 117 aa16.12■□□□□ 0.17
LSM4-201ENST00000252816 DAZ2Q13117 558 aaKnown RBP16.12■□□□□ 0.17
LSM4-201ENST00000252816 ANXA2RQ3ZCQ2 193 aa16.12■□□□□ 0.17
LSM4-201ENST00000252816 SSX7Q7RTT5 188 aa16.12■□□□□ 0.17
LSM4-201ENST00000252816 ZNF680Q8NEM1 530 aa16.12■□□□□ 0.17
LSM4-201ENST00000252816 CMTM2Q8TAZ6 248 aa16.12■□□□□ 0.17
LSM4-201ENST00000252816 GNPNAT1Q96EK6 184 aaPredicted RBP16.12■□□□□ 0.17
LSM4-201ENST00000252816 TP53TG3Q9ULZ0 132 aa16.12■□□□□ 0.17
LSM4-201ENST00000252816 RPH3ALQ9UNE2 315 aa16.12■□□□□ 0.17
LSM4-201ENST00000252816 ARPC5O15511 151 aa16.11■□□□□ 0.17
LSM4-201ENST00000252816 GCHFRP30047 84 aa16.11■□□□□ 0.17
LSM4-201ENST00000252816 FAM74A1Q5RGS3 127 aa16.11■□□□□ 0.17
LSM4-201ENST00000252816 Q6ZTI0 123 aa16.11■□□□□ 0.17
LSM4-201ENST00000252816 SUN5Q8TC36 379 aa16.11■□□□□ 0.17
LSM4-201ENST00000252816 RGS13O14921 159 aa16.1■□□□□ 0.17
LSM4-201ENST00000252816 GNG5P63218 68 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms