RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 CSN1S1P47710 185 aa9.11□□□□□ -0.95
VPREB3-201ENST00000248948 TMEM78Q5T7P6 136 aa9.11□□□□□ -0.95
VPREB3-201ENST00000248948 LGALS9CQ6DKI2 356 aa9.11□□□□□ -0.95
VPREB3-201ENST00000248948 ZNF493Q6ZR52 646 aa9.11□□□□□ -0.95
VPREB3-201ENST00000248948 RNASE8Q8TDE3 154 aaKnown RBP9.11□□□□□ -0.95
VPREB3-201ENST00000248948 FAM210BQ96KR6 192 aa9.11□□□□□ -0.95
VPREB3-201ENST00000248948 LINC01587Q99440 93 aa9.11□□□□□ -0.95
VPREB3-201ENST00000248948 IGHV4-4A0A075B6R2 117 aa9.1□□□□□ -0.95
VPREB3-201ENST00000248948 IGKV2-40A0A087WW87 121 aaPredicted RBP9.1□□□□□ -0.95
VPREB3-201ENST00000248948 IGLL5B9A064 214 aa9.1□□□□□ -0.95
VPREB3-201ENST00000248948 TAAR5O14804 337 aa9.1□□□□□ -0.95
VPREB3-201ENST00000248948 ARPC5O15511 151 aa9.1□□□□□ -0.95
VPREB3-201ENST00000248948 LY6G6CO95867 125 aa9.1□□□□□ -0.95
VPREB3-201ENST00000248948 IGKV2D-40P01614 121 aaPredicted RBP9.1□□□□□ -0.95
VPREB3-201ENST00000248948 STAG3L2P0CL84 134 aa9.1□□□□□ -0.95
VPREB3-201ENST00000248948 STAG3L3P0CL85 134 aa9.1□□□□□ -0.95
VPREB3-201ENST00000248948 ZNF345Q14585 488 aa9.1□□□□□ -0.95
VPREB3-201ENST00000248948 FAM74A1Q5RGS3 127 aa9.1□□□□□ -0.95
VPREB3-201ENST00000248948 ZNF767PQ75MW2 155 aa9.1□□□□□ -0.95
VPREB3-201ENST00000248948 ARL6IP6Q8N6S5 226 aa9.1□□□□□ -0.95
VPREB3-201ENST00000248948 RXFP4Q8TDU9 374 aa9.1□□□□□ -0.95
VPREB3-201ENST00000248948 PYGO2Q9BRQ0 406 aa9.1□□□□□ -0.95
VPREB3-201ENST00000248948 SH3BGRL3Q9H299 93 aa9.1□□□□□ -0.95
VPREB3-201ENST00000248948 OTORQ9NRC9 128 aa9.1□□□□□ -0.95
VPREB3-201ENST00000248948 C7orf71A4D174 169 aa9.09□□□□□ -0.95
VPREB3-201ENST00000248948 ARL14EPLP0DKL9 152 aa9.09□□□□□ -0.95
VPREB3-201ENST00000248948 DAD1P61803 113 aa9.09□□□□□ -0.95
VPREB3-201ENST00000248948 RANP62826 216 aaKnown RBP9.09□□□□□ -0.95
VPREB3-201ENST00000248948 KIR3DS1Q14943 382 aa9.09□□□□□ -0.95
VPREB3-201ENST00000248948 RPL7L1Q6DKI1 246 aaKnown RBP9.09□□□□□ -0.95
VPREB3-201ENST00000248948 LINC00467Q9BRT7 94 aa9.09□□□□□ -0.95
VPREB3-201ENST00000248948 AGPAT4-IT1Q9H0P7 198 aa9.09□□□□□ -0.95
VPREB3-201ENST00000248948 ZNF492Q9P255 531 aa9.09□□□□□ -0.95
VPREB3-201ENST00000248948 APLNQ9ULZ1 77 aa9.09□□□□□ -0.95
VPREB3-201ENST00000248948 VPS13DQ5THJ4 4388 aa9.09□□□□□ -0.95
VPREB3-201ENST00000248948 DNAH6Q9C0G6 4158 aa9.08□□□□□ -0.96
VPREB3-201ENST00000248948 AZU1P20160 251 aa9.08□□□□□ -0.96
VPREB3-201ENST00000248948 ZNF138P52744 262 aa9.08□□□□□ -0.96
VPREB3-201ENST00000248948 ERCC8Q13216 396 aa9.08□□□□□ -0.96
VPREB3-201ENST00000248948 CCDC28AQ8IWP9 274 aa9.08□□□□□ -0.96
VPREB3-201ENST00000248948 CMTM2Q8TAZ6 248 aa9.08□□□□□ -0.96
VPREB3-201ENST00000248948 TMED6Q8WW62 240 aa9.08□□□□□ -0.96
VPREB3-201ENST00000248948 RAB24Q969Q5 203 aa9.08□□□□□ -0.96
VPREB3-201ENST00000248948 VGLL1Q99990 258 aa9.08□□□□□ -0.96
VPREB3-201ENST00000248948 LENEPQ9Y5L5 61 aa9.08□□□□□ -0.96
VPREB3-201ENST00000248948 TRAV12-3A0A0B4J271 114 aa9.07□□□□□ -0.96
VPREB3-201ENST00000248948 DIRC3C9JPN6 131 aa9.07□□□□□ -0.96
VPREB3-201ENST00000248948 J3KRW8 73 aa9.07□□□□□ -0.96
VPREB3-201ENST00000248948 BTN1A1Q13410 526 aa9.07□□□□□ -0.96
VPREB3-201ENST00000248948 ZFAND2AQ8N6M9 145 aa9.07□□□□□ -0.96
VPREB3-201ENST00000248948 ZNF680Q8NEM1 530 aa9.07□□□□□ -0.96
VPREB3-201ENST00000248948 SUN5Q8TC36 379 aa9.07□□□□□ -0.96
VPREB3-201ENST00000248948 NDUFAF3Q9BU61 184 aa9.07□□□□□ -0.96
VPREB3-201ENST00000248948 ACTR3CQ9C0K3 210 aaPredicted RBP9.07□□□□□ -0.96
VPREB3-201ENST00000248948 TIMM8BQ9Y5J9 83 aaPredicted RBP9.07□□□□□ -0.96
VPREB3-201ENST00000248948 SERTM2A0A1B0GWG4 89 aa9.06□□□□□ -0.96
VPREB3-201ENST00000248948 HMSDA8MTL9 139 aa9.06□□□□□ -0.96
VPREB3-201ENST00000248948 HMGB3O15347 200 aaKnown RBP9.06□□□□□ -0.96
VPREB3-201ENST00000248948 EIF3GO75821 320 aaKnown RBP eCLIP9.06□□□□□ -0.96
VPREB3-201ENST00000248948 CXorf1O96002 111 aa9.06□□□□□ -0.96
VPREB3-201ENST00000248948 PRM2P04554 102 aa9.06□□□□□ -0.96
VPREB3-201ENST00000248948 GPX1P07203 203 aa9.06□□□□□ -0.96
VPREB3-201ENST00000248948 HTN1P15515 57 aa9.06□□□□□ -0.96
VPREB3-201ENST00000248948 GCHFRP30047 84 aa9.06□□□□□ -0.96
VPREB3-201ENST00000248948 Q8TAT8 98 aa9.06□□□□□ -0.96
VPREB3-201ENST00000248948 ST6GAL2Q96JF0 529 aa9.06□□□□□ -0.96
VPREB3-201ENST00000248948 TMEM167BQ9NRX6 74 aa9.06□□□□□ -0.96
VPREB3-201ENST00000248948 KMT2AQ03164 3969 aa9.05□□□□□ -0.96
VPREB3-201ENST00000248948 CTXND1A0A1B0GTU2 59 aa9.05□□□□□ -0.96
VPREB3-201ENST00000248948 SMLR1H3BR10 107 aa9.05□□□□□ -0.96
VPREB3-201ENST00000248948 ZNF324O75467 553 aaPredicted RBP9.05□□□□□ -0.96
VPREB3-201ENST00000248948 CD300CQ08708 224 aa9.05□□□□□ -0.96
VPREB3-201ENST00000248948 ANXA2RQ3ZCQ2 193 aa9.05□□□□□ -0.96
VPREB3-201ENST00000248948 PRR9Q5T870 116 aa9.05□□□□□ -0.96
VPREB3-201ENST00000248948 KCNRGQ8N5I3 272 aa9.05□□□□□ -0.96
VPREB3-201ENST00000248948 LINC00612Q8N6U2 182 aa9.05□□□□□ -0.96
VPREB3-201ENST00000248948 C5orf17Q8NAS9 161 aa9.05□□□□□ -0.96
VPREB3-201ENST00000248948 ARPC5LQ9BPX5 153 aa9.05□□□□□ -0.96
VPREB3-201ENST00000248948 PGPA6NDG6 321 aa9.04□□□□□ -0.96
VPREB3-201ENST00000248948 SNURFLB1AK76 121 aa9.04□□□□□ -0.96
VPREB3-201ENST00000248948 ATP5G1P05496 136 aa9.04□□□□□ -0.96
VPREB3-201ENST00000248948 DEFB130BP0DP73 79 aa9.04□□□□□ -0.96
VPREB3-201ENST00000248948 DEFB130AP0DP74 79 aa9.04□□□□□ -0.96
VPREB3-201ENST00000248948 RNASE4P34096 147 aaKnown RBP9.04□□□□□ -0.96
VPREB3-201ENST00000248948 ATP5G3P48201 142 aa9.04□□□□□ -0.96
VPREB3-201ENST00000248948 DAZ2Q13117 558 aaKnown RBP9.04□□□□□ -0.96
VPREB3-201ENST00000248948 AKR1C8PQ5T2L2 129 aa9.04□□□□□ -0.96
VPREB3-201ENST00000248948 IBA57Q5T440 356 aaKnown RBP9.04□□□□□ -0.96
VPREB3-201ENST00000248948 EIF4E3Q8N5X7 224 aaKnown RBP9.04□□□□□ -0.96
VPREB3-201ENST00000248948 HYLS1Q96M11 299 aa9.04□□□□□ -0.96
VPREB3-201ENST00000248948 NOP10Q9NPE3 64 aaKnown RBP9.04□□□□□ -0.96
VPREB3-201ENST00000248948 CYTL1Q9NRR1 136 aa9.04□□□□□ -0.96
VPREB3-201ENST00000248948 A0A0D9SG52 128 aa9.03□□□□□ -0.96
VPREB3-201ENST00000248948 CBY3A6NI87 242 aa9.03□□□□□ -0.96
VPREB3-201ENST00000248948 P0DMU3 169 aa9.03□□□□□ -0.96
VPREB3-201ENST00000248948 FAM231AP0DMU4 169 aa9.03□□□□□ -0.96
VPREB3-201ENST00000248948 FAM231CP0DMU5 169 aa9.03□□□□□ -0.96
VPREB3-201ENST00000248948 HTN3P15516 51 aa9.03□□□□□ -0.96
VPREB3-201ENST00000248948 GOLT1AQ6ZVE7 132 aa9.03□□□□□ -0.96
VPREB3-201ENST00000248948 SSX7Q7RTT5 188 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms