RNA–Protein interactions for RNA: ENST00000244709.8

TREM1-201, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TREM1, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-201ENST00000244709 SLC35B3Q9H1N7 401 aa8.5□□□□□ -1.05
TREM1-201ENST00000244709 HLA-DRB4X5D2U9 266 aa8.5□□□□□ -1.05
TREM1-201ENST00000244709 MGAM2Q2M2H8 2515 aa8.5□□□□□ -1.05
TREM1-201ENST00000244709 NPIPB6E9PJ23 425 aa8.49□□□□□ -1.05
TREM1-201ENST00000244709 K7EQM0 130 aa8.49□□□□□ -1.05
TREM1-201ENST00000244709 SFTA3P0C7M3 94 aa8.49□□□□□ -1.05
TREM1-201ENST00000244709 RPL35P42766 123 aaKnown RBP8.49□□□□□ -1.05
TREM1-201ENST00000244709 UBE2G1P62253 170 aa8.49□□□□□ -1.05
TREM1-201ENST00000244709 ZNF674Q2M3X9 581 aa8.49□□□□□ -1.05
TREM1-201ENST00000244709 C9orf47Q6ZRZ4 202 aa8.49□□□□□ -1.05
TREM1-201ENST00000244709 Q8N1Y9 231 aa8.49□□□□□ -1.05
TREM1-201ENST00000244709 OR4B1Q8NGF8 309 aa8.49□□□□□ -1.05
TREM1-201ENST00000244709 Q8TAT8 98 aa8.49□□□□□ -1.05
TREM1-201ENST00000244709 FMC1Q96HJ9 113 aa8.49□□□□□ -1.05
TREM1-201ENST00000244709 PARLQ9H300 379 aa8.49□□□□□ -1.05
TREM1-201ENST00000244709 ZMAT5Q9UDW3 170 aaKnown RBP8.49□□□□□ -1.05
TREM1-201ENST00000244709 PSG8Q9UQ74 426 aa8.49□□□□□ -1.05
TREM1-201ENST00000244709 H3BMM0 161 aa8.49□□□□□ -1.05
TREM1-201ENST00000244709 IGKV3-20P01619 116 aa8.49□□□□□ -1.05
TREM1-201ENST00000244709 FLI1Q01543 452 aaPredicted RBP8.49□□□□□ -1.05
TREM1-201ENST00000244709 TMEM183BQ1AE95 376 aa8.49□□□□□ -1.05
TREM1-201ENST00000244709 TMEM78Q5T7P6 136 aa8.49□□□□□ -1.05
TREM1-201ENST00000244709 PRNTQ86SH4 94 aa8.49□□□□□ -1.05
TREM1-201ENST00000244709 Q86TA4 180 aa8.49□□□□□ -1.05
TREM1-201ENST00000244709 KLF12Q9Y4X4 402 aa8.49□□□□□ -1.05
TREM1-201ENST00000244709 DUSP14O95147 198 aaKnown RBP8.48□□□□□ -1.05
TREM1-201ENST00000244709 CT45A10P0DMU9 189 aa8.48□□□□□ -1.05
TREM1-201ENST00000244709 STHQ8IWL8 128 aa8.48□□□□□ -1.05
TREM1-201ENST00000244709 IGF2BP2-AS1Q96M15 143 aa8.48□□□□□ -1.05
TREM1-201ENST00000244709 ZNF492Q9P255 531 aa8.48□□□□□ -1.05
TREM1-201ENST00000244709 RBMY1BA6NDE4 496 aaKnown RBP8.47□□□□□ -1.05
TREM1-201ENST00000244709 RBMY1EA6NEQ0 496 aaKnown RBP8.47□□□□□ -1.05
TREM1-201ENST00000244709 S100A9P06702 114 aaKnown RBP8.47□□□□□ -1.05
TREM1-201ENST00000244709 RBMY1DP0C7P1 496 aaKnown RBP8.47□□□□□ -1.05
TREM1-201ENST00000244709 ZNF138P52744 262 aa8.47□□□□□ -1.05
TREM1-201ENST00000244709 TAS2R60P59551 318 aa8.47□□□□□ -1.05
TREM1-201ENST00000244709 CENPWQ5EE01 88 aa8.47□□□□□ -1.05
TREM1-201ENST00000244709 KPRPQ5T749 579 aaPredicted RBP8.47□□□□□ -1.05
TREM1-201ENST00000244709 TVP23CQ96ET8 276 aa8.47□□□□□ -1.05
TREM1-201ENST00000244709 LINC00477Q96M19 166 aa8.47□□□□□ -1.05
TREM1-201ENST00000244709 SRD5A3Q9H8P0 318 aa8.47□□□□□ -1.05
TREM1-201ENST00000244709 NOTCH1P46531 2555 aa8.47□□□□□ -1.05
TREM1-201ENST00000244709 TRBV20OR9-2A0A075B6H5 130 aa8.46□□□□□ -1.05
TREM1-201ENST00000244709 TRBV6-1A0A0K0K1D8 114 aa8.46□□□□□ -1.05
TREM1-201ENST00000244709 TMEM218A2RU14 115 aa8.46□□□□□ -1.05
TREM1-201ENST00000244709 FBLL1A6NHQ2 334 aaKnown RBP8.46□□□□□ -1.05
TREM1-201ENST00000244709 A8MTW9 85 aa8.46□□□□□ -1.05
TREM1-201ENST00000244709 ZNF727A8MUV8 499 aa8.46□□□□□ -1.05
TREM1-201ENST00000244709 LTAP01374 205 aa8.46□□□□□ -1.05
TREM1-201ENST00000244709 ADCYAP1P18509 176 aa8.46□□□□□ -1.05
TREM1-201ENST00000244709 SOHLH1Q5JUK2 328 aa8.46□□□□□ -1.05
TREM1-201ENST00000244709 AMTNQ6UX39 209 aa8.46□□□□□ -1.05
TREM1-201ENST00000244709 TRPT1Q86TN4 253 aaKnown RBP8.46□□□□□ -1.05
TREM1-201ENST00000244709 NHLRC2Q8NBF2 726 aa8.46□□□□□ -1.05
TREM1-201ENST00000244709 FAM19A4Q96LR4 140 aa8.46□□□□□ -1.05
TREM1-201ENST00000244709 C8orf49Q96NF6 230 aa8.46□□□□□ -1.05
TREM1-201ENST00000244709 SMIM7Q9BQ49 75 aa8.46□□□□□ -1.05
TREM1-201ENST00000244709 PGPEP1LA6NFU8 196 aa8.46□□□□□ -1.06
TREM1-201ENST00000244709 PRB2P02812 416 aaPredicted RBP8.46□□□□□ -1.06
TREM1-201ENST00000244709 RPL35AP18077 110 aaKnown RBP8.46□□□□□ -1.06
TREM1-201ENST00000244709 GNG4P50150 75 aa8.46□□□□□ -1.06
TREM1-201ENST00000244709 BAGE2Q86Y30 109 aa8.46□□□□□ -1.06
TREM1-201ENST00000244709 PPP1R14DQ9NXH3 145 aa8.46□□□□□ -1.06
TREM1-201ENST00000244709 C9JCJ5 164 aa8.45□□□□□ -1.06
TREM1-201ENST00000244709 F8W036 122 aa8.45□□□□□ -1.06
TREM1-201ENST00000244709 J3KRW8 73 aa8.45□□□□□ -1.06
TREM1-201ENST00000244709 FXYD7P58549 80 aa8.45□□□□□ -1.06
TREM1-201ENST00000244709 FAM74A3Q4VXF1 159 aa8.45□□□□□ -1.06
TREM1-201ENST00000244709 ODF3Q96PU9 254 aa8.45□□□□□ -1.06
TREM1-201ENST00000244709 NDFIP1Q9BT67 221 aa8.45□□□□□ -1.06
TREM1-201ENST00000244709 NBEAL1Q6ZS30 2694 aa8.44□□□□□ -1.06
TREM1-201ENST00000244709 M0R2Z0 102 aa8.44□□□□□ -1.06
TREM1-201ENST00000244709 IGLV2-8P01709 118 aa8.44□□□□□ -1.06
TREM1-201ENST00000244709 IGHV4-30-4P0DP06 118 aa8.44□□□□□ -1.06
TREM1-201ENST00000244709 LEPP41159 167 aa8.44□□□□□ -1.06
TREM1-201ENST00000244709 KIR3DS1Q14943 382 aa8.44□□□□□ -1.06
TREM1-201ENST00000244709 SPINK13Q1W4C9 94 aa8.44□□□□□ -1.06
TREM1-201ENST00000244709 PRR9Q5T870 116 aa8.44□□□□□ -1.06
TREM1-201ENST00000244709 CLUHP3Q96NS8 147 aa8.44□□□□□ -1.06
TREM1-201ENST00000244709 AURKAIP1Q9NWT8 199 aaPredicted RBP8.44□□□□□ -1.06
TREM1-201ENST00000244709 ZFP30Q9Y2G7 519 aa8.44□□□□□ -1.06
TREM1-201ENST00000244709 LENEPQ9Y5L5 61 aa8.44□□□□□ -1.06
TREM1-201ENST00000244709 CRISP2P16562 243 aa8.43□□□□□ -1.06
TREM1-201ENST00000244709 SAPCD1Q5SSQ6 148 aa8.43□□□□□ -1.06
TREM1-201ENST00000244709 TMEM183AQ8IXX5 376 aa8.43□□□□□ -1.06
TREM1-201ENST00000244709 ZFAND2AQ8N6M9 145 aa8.43□□□□□ -1.06
TREM1-201ENST00000244709 ZC2HC1AQ96GY0 325 aa8.43□□□□□ -1.06
TREM1-201ENST00000244709 NIPSNAP3BQ9BS92 247 aa8.43□□□□□ -1.06
TREM1-201ENST00000244709 MLST8Q9BVC4 326 aa8.43□□□□□ -1.06
TREM1-201ENST00000244709 SEC11CQ9BY50 192 aa8.43□□□□□ -1.06
TREM1-201ENST00000244709 TUBA4BQ9H853 241 aa8.43□□□□□ -1.06
TREM1-201ENST00000244709 NAT8Q9UHE5 227 aa8.43□□□□□ -1.06
TREM1-201ENST00000244709 TRAV12-2A0A075B6T6 113 aa8.43□□□□□ -1.06
TREM1-201ENST00000244709 TRBV7-9A0A0J9YWB2 115 aa8.43□□□□□ -1.06
TREM1-201ENST00000244709 K7EN84 100 aa8.43□□□□□ -1.06
TREM1-201ENST00000244709 MGST1P10620 155 aaKnown RBP8.43□□□□□ -1.06
TREM1-201ENST00000244709 CDKN1BP46527 198 aa8.43□□□□□ -1.06
TREM1-201ENST00000244709 TMEM241Q24JQ0 296 aa8.43□□□□□ -1.06
TREM1-201ENST00000244709 OCC1Q8TAD7 63 aa8.43□□□□□ -1.06
TREM1-201ENST00000244709 LOC102724200A0A096LPH7 203 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms