RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 LOXP28300 417 aaPredicted RBP8.8□□□□□ -1
COPA-201ENST00000241704 ASIPP42127 132 aa8.8□□□□□ -1
COPA-201ENST00000241704 OTORQ9NRC9 128 aa8.8□□□□□ -1
COPA-201ENST00000241704 CMC4P56277 68 aaPredicted RBP8.79□□□□□ -1
COPA-201ENST00000241704 J3QLI3 93 aa8.79□□□□□ -1
COPA-201ENST00000241704 LGALS9BQ3B8N2 356 aa8.79□□□□□ -1
COPA-201ENST00000241704 LGALS9CQ6DKI2 356 aa8.79□□□□□ -1
COPA-201ENST00000241704 H7C1H1 209 aa8.79□□□□□ -1
COPA-201ENST00000241704 NEGR1Q7Z3B1 354 aa8.79□□□□□ -1
COPA-201ENST00000241704 FOXC2Q99958 501 aa8.79□□□□□ -1
COPA-201ENST00000241704 NCOA6Q14686 2063 aaPredicted RBP8.79□□□□□ -1
COPA-201ENST00000241704 OR11H12B2RN74 326 aa8.78□□□□□ -1
COPA-201ENST00000241704 PRSS57Q6UWY2 283 aa8.78□□□□□ -1
COPA-201ENST00000241704 OR11H1Q8NG94 326 aa8.78□□□□□ -1
COPA-201ENST00000241704 OR11H2Q8NH07 326 aa8.78□□□□□ -1
COPA-201ENST00000241704 KIR2DL4Q99706 377 aa8.78□□□□□ -1
COPA-201ENST00000241704 GFRA4Q9GZZ7 299 aa8.78□□□□□ -1
COPA-201ENST00000241704 ZNRD1Q9P1U0 126 aa8.78□□□□□ -1
COPA-201ENST00000241704 HOXA3O43365 443 aaPredicted RBP8.78□□□□□ -1
COPA-201ENST00000241704 FNDC10F2Z333 226 aa8.78□□□□□ -1
COPA-201ENST00000241704 H3BMG7 143 aa8.78□□□□□ -1
COPA-201ENST00000241704 IGKCP01834 107 aa8.78□□□□□ -1
COPA-201ENST00000241704 RNASE2P10153 161 aaKnown RBP8.78□□□□□ -1
COPA-201ENST00000241704 DEFB113Q30KQ7 82 aa8.78□□□□□ -1
COPA-201ENST00000241704 CT83Q5H943 113 aa8.78□□□□□ -1
COPA-201ENST00000241704 Q6ZPA2 131 aa8.78□□□□□ -1
COPA-201ENST00000241704 USMG5Q96IX5 58 aa8.78□□□□□ -1
COPA-201ENST00000241704 ZNF747Q9BV97 191 aa8.78□□□□□ -1
COPA-201ENST00000241704 KAAG1Q9UBP8 84 aa8.78□□□□□ -1
COPA-201ENST00000241704 DPM2O94777 84 aa8.78□□□□□ -1
COPA-201ENST00000241704 RNASE4P34096 147 aaKnown RBP8.78□□□□□ -1
COPA-201ENST00000241704 SEM1Q6ZVN7 128 aa8.78□□□□□ -1
COPA-201ENST00000241704 LINC00311Q8N616 119 aa8.78□□□□□ -1
COPA-201ENST00000241704 ZNF502Q8TBZ5 544 aa8.78□□□□□ -1
COPA-201ENST00000241704 TRGV9Q99603 122 aa8.78□□□□□ -1
COPA-201ENST00000241704 TNFRSF18Q9Y5U5 241 aa8.78□□□□□ -1
COPA-201ENST00000241704 RPL13AP40429 203 aaKnown RBP8.77□□□□□ -1
COPA-201ENST00000241704 DLX4Q92988 240 aaPredicted RBP8.77□□□□□ -1
COPA-201ENST00000241704 IL17RELQ6ZVW7 336 aa8.77□□□□□ -1.01
COPA-201ENST00000241704 SH2D6Q7Z4S9 175 aa8.77□□□□□ -1.01
COPA-201ENST00000241704 PCNX3Q9H6A9 2034 aa8.77□□□□□ -1.01
COPA-201ENST00000241704 SHISA9B4DS77 424 aa8.77□□□□□ -1.01
COPA-201ENST00000241704 ATP5LO75964 103 aa8.77□□□□□ -1.01
COPA-201ENST00000241704 ZNF833PQ6ZTB9 187 aa8.77□□□□□ -1.01
COPA-201ENST00000241704 SLC25A2Q9BXI2 301 aa8.77□□□□□ -1.01
COPA-201ENST00000241704 TMEM14BQ9NUH8 114 aa8.77□□□□□ -1.01
COPA-201ENST00000241704 B5MCH6 92 aa8.77□□□□□ -1.01
COPA-201ENST00000241704 SPANXA1Q9NS26 97 aa8.77□□□□□ -1.01
COPA-201ENST00000241704 A8MWV9 139 aa8.76□□□□□ -1.01
COPA-201ENST00000241704 WFDC2Q14508 124 aa8.76□□□□□ -1.01
COPA-201ENST00000241704 CIARTQ8N365 385 aaPredicted RBP8.76□□□□□ -1.01
COPA-201ENST00000241704 TRAV8-2A0A0B4J237 113 aa8.76□□□□□ -1.01
COPA-201ENST00000241704 ZNF134P52741 427 aa8.76□□□□□ -1.01
COPA-201ENST00000241704 ASPHD1Q5U4P2 390 aa8.76□□□□□ -1.01
COPA-201ENST00000241704 SRSF8Q9BRL6 282 aaKnown RBP8.76□□□□□ -1.01
COPA-201ENST00000241704 K7ERJ3 54 aa8.76□□□□□ -1.01
COPA-201ENST00000241704 CD7P09564 240 aa8.76□□□□□ -1.01
COPA-201ENST00000241704 ZNF688P0C7X2 276 aa8.76□□□□□ -1.01
COPA-201ENST00000241704 UFSP1Q6NVU6 142 aa8.76□□□□□ -1.01
COPA-201ENST00000241704 SMPXQ9UHP9 88 aa8.76□□□□□ -1.01
COPA-201ENST00000241704 WISP2O76076 250 aa8.76□□□□□ -1.01
COPA-201ENST00000241704 IFI27P40305 119 aaPredicted RBP8.76□□□□□ -1.01
COPA-201ENST00000241704 LSM4Q9Y4Z0 139 aaKnown RBP8.76□□□□□ -1.01
COPA-201ENST00000241704 TNCP24821 2201 aa8.75□□□□□ -1.01
COPA-201ENST00000241704 SIGLEC15Q6ZMC9 328 aa8.75□□□□□ -1.01
COPA-201ENST00000241704 C8orf86Q6ZUL3 223 aa8.75□□□□□ -1.01
COPA-201ENST00000241704 KLK15Q9H2R5 256 aa8.75□□□□□ -1.01
COPA-201ENST00000241704 D6R8Y8 96 aa8.75□□□□□ -1.01
COPA-201ENST00000241704 ZNF492Q9P255 531 aa8.75□□□□□ -1.01
COPA-201ENST00000241704 EML5Q05BV3 1969 aa8.75□□□□□ -1.01
COPA-201ENST00000241704 M0R3E3 92 aa8.75□□□□□ -1.01
COPA-201ENST00000241704 LEPP41159 167 aa8.75□□□□□ -1.01
COPA-201ENST00000241704 ADORA2A-AS1P86434 159 aa8.75□□□□□ -1.01
COPA-201ENST00000241704 PRR20EP86478 221 aa8.75□□□□□ -1.01
COPA-201ENST00000241704 PRR20CP86479 221 aa8.75□□□□□ -1.01
COPA-201ENST00000241704 PRR20DP86480 221 aa8.75□□□□□ -1.01
COPA-201ENST00000241704 PRR20BP86481 221 aa8.75□□□□□ -1.01
COPA-201ENST00000241704 PRR20AP86496 221 aa8.75□□□□□ -1.01
COPA-201ENST00000241704 BOD1L2Q8IYS8 172 aa8.75□□□□□ -1.01
COPA-201ENST00000241704 IGF2BP2-AS1Q96M15 143 aa8.75□□□□□ -1.01
COPA-201ENST00000241704 TRBV7-1A0A0A6YYK4 115 aa8.74□□□□□ -1.01
COPA-201ENST00000241704 A0A1W2PPI3 338 aa8.74□□□□□ -1.01
COPA-201ENST00000241704 LHBP01229 141 aa8.74□□□□□ -1.01
COPA-201ENST00000241704 ANKRD11Q6UB99 2663 aaPredicted RBP8.74□□□□□ -1.01
COPA-201ENST00000241704 FOXI2Q6ZQN5 318 aa8.74□□□□□ -1.01
COPA-201ENST00000241704 SYNJ2BPP57105 145 aa8.74□□□□□ -1.01
COPA-201ENST00000241704 MLANAQ16655 118 aa8.74□□□□□ -1.01
COPA-201ENST00000241704 LINC01559Q495D7 138 aa8.74□□□□□ -1.01
COPA-201ENST00000241704 PAPPA-AS1Q5QFB9 102 aa8.74□□□□□ -1.01
COPA-201ENST00000241704 SFTA2Q6UW10 78 aa8.74□□□□□ -1.01
COPA-201ENST00000241704 ZNF562Q6V9R5 426 aa8.74□□□□□ -1.01
COPA-201ENST00000241704 TMEM190Q8WZ59 177 aa8.74□□□□□ -1.01
COPA-201ENST00000241704 NDUFA4L2Q9NRX3 87 aa8.74□□□□□ -1.01
COPA-201ENST00000241704 UTRNP46939 3433 aa8.74□□□□□ -1.01
COPA-201ENST00000241704 FXYD7P58549 80 aa8.74□□□□□ -1.01
COPA-201ENST00000241704 AMTNQ6UX39 209 aa8.74□□□□□ -1.01
COPA-201ENST00000241704 FAM110DQ8TAY7 271 aaPredicted RBP8.74□□□□□ -1.01
COPA-201ENST00000241704 PPDPFLQ8WWR9 84 aa8.74□□□□□ -1.01
COPA-201ENST00000241704 CEP192Q8TEP8 1941 aa8.73□□□□□ -1.01
COPA-201ENST00000241704 TRGV4A0A0C4DH28 118 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms