RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 ZNF474Q6S9Z5 364 aaPredicted RBP10.18□□□□□ -0.78
MSH2-201ENST00000233146 CXorf67Q86X51 503 aaPredicted RBP10.18□□□□□ -0.78
MSH2-201ENST00000233146 IGLV2-18A0A075B6J9 118 aa10.18□□□□□ -0.78
MSH2-201ENST00000233146 FSCN3Q9NQT6 498 aa10.18□□□□□ -0.78
MSH2-201ENST00000233146 MAP1BP46821 2468 aaKnown RBP10.18□□□□□ -0.78
MSH2-201ENST00000233146 IGKV3D-15A0A087WSY6 115 aa10.18□□□□□ -0.78
MSH2-201ENST00000233146 CFC1BP0CG36 223 aa10.18□□□□□ -0.78
MSH2-201ENST00000233146 CFC1P0CG37 223 aa10.18□□□□□ -0.78
MSH2-201ENST00000233146 Q8N8P6 123 aa10.18□□□□□ -0.78
MSH2-201ENST00000233146 PLEKHB2Q96CS7 222 aa10.18□□□□□ -0.78
MSH2-201ENST00000233146 F8VRH5 84 aa10.17□□□□□ -0.78
MSH2-201ENST00000233146 LGALS9O00182 355 aa10.17□□□□□ -0.78
MSH2-201ENST00000233146 CECR9P0C854 216 aa10.17□□□□□ -0.78
MSH2-201ENST00000233146 DEFB133Q30KQ1 61 aa10.17□□□□□ -0.78
MSH2-201ENST00000233146 TRPT1Q86TN4 253 aaKnown RBP10.17□□□□□ -0.78
MSH2-201ENST00000233146 TIMD4Q96H15 378 aa10.17□□□□□ -0.78
MSH2-201ENST00000233146 CUL9Q8IWT3 2517 aa10.17□□□□□ -0.78
MSH2-201ENST00000233146 TEX49A0A1B0GTD5 131 aa10.17□□□□□ -0.78
MSH2-201ENST00000233146 H7C1H1 209 aa10.17□□□□□ -0.78
MSH2-201ENST00000233146 IGLC6P0CF74 106 aa10.17□□□□□ -0.78
MSH2-201ENST00000233146 IGFBP4P22692 258 aa10.17□□□□□ -0.78
MSH2-201ENST00000233146 CD177Q8N6Q3 437 aa10.17□□□□□ -0.78
MSH2-201ENST00000233146 OR4C13Q8NGP0 309 aa10.17□□□□□ -0.78
MSH2-201ENST00000233146 LEAP2Q969E1 77 aa10.17□□□□□ -0.78
MSH2-201ENST00000233146 IGKV1-16P04430 117 aa10.17□□□□□ -0.78
MSH2-201ENST00000233146 TMEM190Q8WZ59 177 aa10.17□□□□□ -0.78
MSH2-201ENST00000233146 SVILO95425 2214 aa10.16□□□□□ -0.78
MSH2-201ENST00000233146 TRAV12-1A0A0B4J245 112 aa10.16□□□□□ -0.78
MSH2-201ENST00000233146 E7EUB6 86 aa10.16□□□□□ -0.78
MSH2-201ENST00000233146 WDFY3Q8IZQ1 3526 aa10.16□□□□□ -0.78
MSH2-201ENST00000233146 ZNF815PA8K554 130 aa10.16□□□□□ -0.78
MSH2-201ENST00000233146 SAA1P0DJI8 122 aaPredicted RBP10.16□□□□□ -0.78
MSH2-201ENST00000233146 C6orf15Q6UXA7 325 aaPredicted RBP10.16□□□□□ -0.78
MSH2-201ENST00000233146 POM121L12Q8N7R1 296 aa10.16□□□□□ -0.78
MSH2-201ENST00000233146 C8orf49Q96NF6 230 aa10.16□□□□□ -0.78
MSH2-201ENST00000233146 TMEM14CQ9P0S9 112 aa10.16□□□□□ -0.78
MSH2-201ENST00000233146 HLA-DMBP28068 263 aa10.15□□□□□ -0.78
MSH2-201ENST00000233146 MFAP4P55083 255 aa10.15□□□□□ -0.78
MSH2-201ENST00000233146 EBI3Q14213 229 aa10.15□□□□□ -0.78
MSH2-201ENST00000233146 SCGB1D4Q6XE38 83 aa10.15□□□□□ -0.78
MSH2-201ENST00000233146 LINC00526Q96FQ7 95 aa10.15□□□□□ -0.78
MSH2-201ENST00000233146 CFAP54Q96N23 3096 aa10.15□□□□□ -0.78
MSH2-201ENST00000233146 UQCRQO14949 82 aa10.15□□□□□ -0.78
MSH2-201ENST00000233146 COX6B1P14854 86 aa10.15□□□□□ -0.78
MSH2-201ENST00000233146 SUB1P53999 127 aaKnown RBP eCLIP10.15□□□□□ -0.782e-9■■■■■ 27.7
MSH2-201ENST00000233146 RUSC1-AS1Q66K80 236 aa10.15□□□□□ -0.78
MSH2-201ENST00000233146 TMEM219Q86XT9 240 aa10.15□□□□□ -0.78
MSH2-201ENST00000233146 EDA2RQ9HAV5 297 aa10.15□□□□□ -0.78
MSH2-201ENST00000233146 PRO1854Q9UHT4 67 aa10.15□□□□□ -0.78
MSH2-201ENST00000233146 F5H768 121 aa10.15□□□□□ -0.79
MSH2-201ENST00000233146 K7EM74 188 aa10.15□□□□□ -0.79
MSH2-201ENST00000233146 EFNA4P52798 201 aa10.15□□□□□ -0.79
MSH2-201ENST00000233146 TNFAIP6P98066 277 aaPredicted RBP10.15□□□□□ -0.79
MSH2-201ENST00000233146 WT1-ASQ06250 92 aa10.15□□□□□ -0.79
MSH2-201ENST00000233146 TEX36Q5VZQ5 186 aa10.15□□□□□ -0.79
MSH2-201ENST00000233146 SSUH2Q9Y2M2 353 aa10.15□□□□□ -0.79
MSH2-201ENST00000233146 IQCF6A8MYZ5 107 aa10.14□□□□□ -0.79
MSH2-201ENST00000233146 MRPS12O15235 138 aaKnown RBP10.14□□□□□ -0.79
MSH2-201ENST00000233146 PCOLCEQ15113 449 aa10.14□□□□□ -0.79
MSH2-201ENST00000233146 C1orf162Q8NEQ5 155 aaPredicted RBP10.14□□□□□ -0.79
MSH2-201ENST00000233146 CTSZQ9UBR2 303 aa10.14□□□□□ -0.79
MSH2-201ENST00000233146 KLK5Q9Y337 293 aaPredicted RBP10.14□□□□□ -0.79
MSH2-201ENST00000233146 ZNF56Q15929 161 aa10.14□□□□□ -0.79
MSH2-201ENST00000233146 DOCK10Q96BY6 2186 aa10.14□□□□□ -0.79
MSH2-201ENST00000233146 EP300Q09472 2414 aaPredicted RBP10.14□□□□□ -0.79
MSH2-201ENST00000233146 DUX1O43812 170 aa10.13□□□□□ -0.79
MSH2-201ENST00000233146 SH2D1AO60880 128 aa10.13□□□□□ -0.79
MSH2-201ENST00000233146 RFPL3SP0C7P2 107 aa10.13□□□□□ -0.79
MSH2-201ENST00000233146 GATA1P15976 413 aaPredicted RBP10.13□□□□□ -0.79
MSH2-201ENST00000233146 SPANXCQ9NY87 97 aa10.13□□□□□ -0.79
MSH2-201ENST00000233146 RBAKDNA6NC62 111 aa10.13□□□□□ -0.79
MSH2-201ENST00000233146 PRDX2P32119 198 aa10.13□□□□□ -0.79
MSH2-201ENST00000233146 EMP1P54849 157 aa10.13□□□□□ -0.79
MSH2-201ENST00000233146 LAGE3Q14657 143 aa10.13□□□□□ -0.79
MSH2-201ENST00000233146 MSRB1Q9NZV6 116 aa10.13□□□□□ -0.79
MSH2-201ENST00000233146 NBEAQ8NFP9 2946 aa10.13□□□□□ -0.79
MSH2-201ENST00000233146 NAV3Q8IVL0 2385 aa10.13□□□□□ -0.79
MSH2-201ENST00000233146 FAM236AA0A1B0GUQ0 79 aa10.13□□□□□ -0.79
MSH2-201ENST00000233146 FAM236BA0A1B0GV22 79 aa10.13□□□□□ -0.79
MSH2-201ENST00000233146 FAM240AA0A1B0GVK7 77 aa10.13□□□□□ -0.79
MSH2-201ENST00000233146 PRR25Q96S07 402 aa10.13□□□□□ -0.79
MSH2-201ENST00000233146 OBP2BQ9NPH6 170 aa10.13□□□□□ -0.79
MSH2-201ENST00000233146 A0A1W2PPC4 97 aa10.12□□□□□ -0.79
MSH2-201ENST00000233146 CGB1A6NKQ9 187 aa10.12□□□□□ -0.79
MSH2-201ENST00000233146 H3BMM0 161 aa10.12□□□□□ -0.79
MSH2-201ENST00000233146 P0DMU3 169 aa10.12□□□□□ -0.79
MSH2-201ENST00000233146 FAM231AP0DMU4 169 aa10.12□□□□□ -0.79
MSH2-201ENST00000233146 FAM231CP0DMU5 169 aa10.12□□□□□ -0.79
MSH2-201ENST00000233146 LINC01620Q4KN68 170 aa10.12□□□□□ -0.79
MSH2-201ENST00000233146 UBE2WQ96B02 151 aa10.12□□□□□ -0.79
MSH2-201ENST00000233146 TRGV11A0A075B6L2 103 aa10.12□□□□□ -0.79
MSH2-201ENST00000233146 IGHV3-30P01768 117 aa10.12□□□□□ -0.79
MSH2-201ENST00000233146 CGB3P0DN86 165 aa10.12□□□□□ -0.79
MSH2-201ENST00000233146 CGB7P0DN87 165 aa10.12□□□□□ -0.79
MSH2-201ENST00000233146 IGHV3-30-5P0DP03 117 aa10.12□□□□□ -0.79
MSH2-201ENST00000233146 MDP1Q86V88 176 aa10.12□□□□□ -0.79
MSH2-201ENST00000233146 ZNRF2Q8NHG8 242 aa10.12□□□□□ -0.79
MSH2-201ENST00000233146 IGHV1-45A0A0A0MS14 117 aa10.12□□□□□ -0.79
MSH2-201ENST00000233146 SLC25A16P16260 332 aa10.12□□□□□ -0.79
MSH2-201ENST00000233146 VKORC1Q9BQB6 163 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms