RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 TMEM18Q96B42 140 aa8.18□□□□□ -1.1
CDCA3-201ENST00000229265 C17orf77Q96MU5 243 aa8.18□□□□□ -1.1
CDCA3-201ENST00000229265 NDFIP1Q9BT67 221 aa8.18□□□□□ -1.1
CDCA3-201ENST00000229265 MRPL18Q9H0U6 180 aaKnown RBP8.18□□□□□ -1.1
CDCA3-201ENST00000229265 PEF1Q9UBV8 284 aaKnown RBP8.18□□□□□ -1.1
CDCA3-201ENST00000229265 S4R3C0 116 aa8.18□□□□□ -1.1
CDCA3-201ENST00000229265 IGHV3-23P01764 117 aa8.17□□□□□ -1.1
CDCA3-201ENST00000229265 PF4V1P10720 104 aa8.17□□□□□ -1.1
CDCA3-201ENST00000229265 TMEM136Q6ZRR5 245 aa8.17□□□□□ -1.1
CDCA3-201ENST00000229265 PRNTQ86SH4 94 aa8.17□□□□□ -1.1
CDCA3-201ENST00000229265 GBGT1Q8N5D6 347 aa8.17□□□□□ -1.1
CDCA3-201ENST00000229265 OR4X2Q8NGF9 303 aa8.17□□□□□ -1.1
CDCA3-201ENST00000229265 PRR25Q96S07 402 aa8.17□□□□□ -1.1
CDCA3-201ENST00000229265 ASCL2Q99929 193 aa8.17□□□□□ -1.1
CDCA3-201ENST00000229265 GNB4Q9HAV0 340 aa8.17□□□□□ -1.1
CDCA3-201ENST00000229265 FABP5P3A8MUU1 101 aa8.16□□□□□ -1.1
CDCA3-201ENST00000229265 SNURFLB1AK76 121 aa8.16□□□□□ -1.1
CDCA3-201ENST00000229265 LGALS9O00182 355 aa8.16□□□□□ -1.1
CDCA3-201ENST00000229265 HOXA3O43365 443 aaPredicted RBP8.16□□□□□ -1.1
CDCA3-201ENST00000229265 CRISP2P16562 243 aa8.16□□□□□ -1.1
CDCA3-201ENST00000229265 MGAM2Q2M2H8 2515 aa8.16□□□□□ -1.1
CDCA3-201ENST00000229265 GATD1Q8NB37 220 aa8.16□□□□□ -1.1
CDCA3-201ENST00000229265 DNAH3Q8TD57 4116 aa8.16□□□□□ -1.1
CDCA3-201ENST00000229265 GLMPQ8WWB7 406 aa8.16□□□□□ -1.1
CDCA3-201ENST00000229265 UBE2E2Q96LR5 201 aa8.16□□□□□ -1.1
CDCA3-201ENST00000229265 LINC00477Q96M19 166 aa8.16□□□□□ -1.1
CDCA3-201ENST00000229265 NEU1Q99519 415 aa8.16□□□□□ -1.1
CDCA3-201ENST00000229265 C12orf57Q99622 126 aa8.16□□□□□ -1.1
CDCA3-201ENST00000229265 UFC1Q9Y3C8 167 aa8.16□□□□□ -1.1
CDCA3-201ENST00000229265 A0A1B0GXF2 115 aa8.15□□□□□ -1.1
CDCA3-201ENST00000229265 HIGD1CA8MV81 97 aa8.15□□□□□ -1.1
CDCA3-201ENST00000229265 OVOL1O14753 267 aa8.15□□□□□ -1.1
CDCA3-201ENST00000229265 CHEK1O14757 476 aa8.15□□□□□ -1.1
CDCA3-201ENST00000229265 WIPF1O43516 503 aa8.15□□□□□ -1.1
CDCA3-201ENST00000229265 IGHV4-59P01825 116 aa8.15□□□□□ -1.1
CDCA3-201ENST00000229265 APCSP02743 223 aa8.15□□□□□ -1.1
CDCA3-201ENST00000229265 RIGQ13278 110 aa8.15□□□□□ -1.1
CDCA3-201ENST00000229265 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.15□□□□□ -1.1
CDCA3-201ENST00000229265 C9orf47Q6ZRZ4 202 aa8.15□□□□□ -1.1
CDCA3-201ENST00000229265 MYOZ3Q8TDC0 251 aa8.15□□□□□ -1.1
CDCA3-201ENST00000229265 ZNF418Q8TF45 676 aaPredicted RBP8.15□□□□□ -1.1
CDCA3-201ENST00000229265 SH2D7A6NKC9 451 aaPredicted RBP8.14□□□□□ -1.11
CDCA3-201ENST00000229265 HBBP68871 147 aa8.14□□□□□ -1.11
CDCA3-201ENST00000229265 HIST1H1AQ02539 215 aaPredicted RBP8.14□□□□□ -1.11
CDCA3-201ENST00000229265 KLF5Q13887 457 aaPredicted RBP8.14□□□□□ -1.11
CDCA3-201ENST00000229265 PRR27Q6MZM9 219 aa8.14□□□□□ -1.11
CDCA3-201ENST00000229265 C12orf54Q6X4T0 127 aa8.14□□□□□ -1.11
CDCA3-201ENST00000229265 BORCS7Q96B45 105 aa8.14□□□□□ -1.11
CDCA3-201ENST00000229265 GPR61Q9BZJ8 451 aa8.14□□□□□ -1.11
CDCA3-201ENST00000229265 DAZ1Q9NQZ3 744 aaKnown RBP8.14□□□□□ -1.11
CDCA3-201ENST00000229265 SMPXQ9UHP9 88 aa8.14□□□□□ -1.11
CDCA3-201ENST00000229265 RPH3ALQ9UNE2 315 aa8.14□□□□□ -1.11
CDCA3-201ENST00000229265 WNK1Q9H4A3 2382 aa8.13□□□□□ -1.11
CDCA3-201ENST00000229265 IGHV7-4-1A0A0J9YVY3 117 aa8.13□□□□□ -1.11
CDCA3-201ENST00000229265 A0A1B0GUT8 65 aa8.13□□□□□ -1.11
CDCA3-201ENST00000229265 F2Z2F3 143 aa8.13□□□□□ -1.11
CDCA3-201ENST00000229265 H3BTX0 84 aa8.13□□□□□ -1.11
CDCA3-201ENST00000229265 M0R3E3 92 aa8.13□□□□□ -1.11
CDCA3-201ENST00000229265 PLXNB1O43157 2135 aa8.13□□□□□ -1.11
CDCA3-201ENST00000229265 RNASE1P07998 156 aaKnown RBP8.13□□□□□ -1.11
CDCA3-201ENST00000229265 SNRPCP09234 159 aaKnown RBP8.13□□□□□ -1.11
CDCA3-201ENST00000229265 LINC00322Q6ZN03 302 aaPredicted RBP8.13□□□□□ -1.11
CDCA3-201ENST00000229265 REC114Q7Z4M0 266 aa8.13□□□□□ -1.11
CDCA3-201ENST00000229265 NHLRC2Q8NBF2 726 aa8.13□□□□□ -1.11
CDCA3-201ENST00000229265 OR2D3Q8NGH3 330 aa8.13□□□□□ -1.11
CDCA3-201ENST00000229265 ZC2HC1AQ96GY0 325 aa8.13□□□□□ -1.11
CDCA3-201ENST00000229265 NOL4LQ96MY1 436 aaPredicted RBP8.13□□□□□ -1.11
CDCA3-201ENST00000229265 HIST1H2BLQ99880 126 aa8.13□□□□□ -1.11
CDCA3-201ENST00000229265 KLK15Q9H2R5 256 aa8.13□□□□□ -1.11
CDCA3-201ENST00000229265 TRAV8-1A0A0A6YYK1 113 aa8.12□□□□□ -1.11
CDCA3-201ENST00000229265 TMEM189A5PLL7 270 aa8.12□□□□□ -1.11
CDCA3-201ENST00000229265 FAM181BA6NEQ2 426 aa8.12□□□□□ -1.11
CDCA3-201ENST00000229265 IFITM10A6NMD0 228 aa8.12□□□□□ -1.11
CDCA3-201ENST00000229265 RAB4AP20338 218 aa8.12□□□□□ -1.11
CDCA3-201ENST00000229265 CBLN1P23435 193 aa8.12□□□□□ -1.11
CDCA3-201ENST00000229265 ID1P41134 155 aa8.12□□□□□ -1.11
CDCA3-201ENST00000229265 CRIP1P50238 77 aa8.12□□□□□ -1.11
CDCA3-201ENST00000229265 ZNF138P52744 262 aa8.12□□□□□ -1.11
CDCA3-201ENST00000229265 JOSD1Q15040 202 aaPredicted RBP8.12□□□□□ -1.11
CDCA3-201ENST00000229265 TMEM78Q5T7P6 136 aa8.12□□□□□ -1.11
CDCA3-201ENST00000229265 ZNF493Q6ZR52 646 aa8.12□□□□□ -1.11
CDCA3-201ENST00000229265 C8orf86Q6ZUL3 223 aa8.12□□□□□ -1.11
CDCA3-201ENST00000229265 C16orf92Q96LL3 132 aa8.12□□□□□ -1.11
CDCA3-201ENST00000229265 NRN1Q9NPD7 142 aa8.12□□□□□ -1.11
CDCA3-201ENST00000229265 LINC00527Q9UJ94 153 aa8.12□□□□□ -1.11
CDCA3-201ENST00000229265 FABP4P15090 132 aa8.11□□□□□ -1.11
CDCA3-201ENST00000229265 Q6ZS46 218 aa8.11□□□□□ -1.11
CDCA3-201ENST00000229265 OR10D4PQ8NGN7 298 aa8.11□□□□□ -1.11
CDCA3-201ENST00000229265 GTSF1Q8WW33 167 aa8.11□□□□□ -1.11
CDCA3-201ENST00000229265 SGK494Q96LW2 274 aa8.11□□□□□ -1.11
CDCA3-201ENST00000229265 ZNF702PQ9H963 129 aa8.11□□□□□ -1.11
CDCA3-201ENST00000229265 TRAV8-2A0A0B4J237 113 aa8.1□□□□□ -1.11
CDCA3-201ENST00000229265 APOHP02749 345 aaPredicted RBP8.1□□□□□ -1.11
CDCA3-201ENST00000229265 LGALS1P09382 135 aaKnown RBP8.1□□□□□ -1.11
CDCA3-201ENST00000229265 PMCHP20382 165 aa8.1□□□□□ -1.11
CDCA3-201ENST00000229265 RAB4BP61018 213 aa8.1□□□□□ -1.11
CDCA3-201ENST00000229265 MRPL54Q6P161 138 aaKnown RBP8.1□□□□□ -1.11
CDCA3-201ENST00000229265 BAGE3Q86Y29 109 aa8.1□□□□□ -1.11
CDCA3-201ENST00000229265 ZNF747Q9BV97 191 aa8.1□□□□□ -1.11
CDCA3-201ENST00000229265 RHPN1-AS1Q9BWJ2 59 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms