RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 KCNS1Q96KK3 526 aa13.48□□□□□ -0.25
GCDH-201ENST00000222214 ASCL2Q99929 193 aa13.48□□□□□ -0.25
GCDH-201ENST00000222214 ALKBH7Q9BT30 221 aaPredicted RBP13.48□□□□□ -0.25
GCDH-201ENST00000222214 SAMD10Q9BYL1 202 aa13.48□□□□□ -0.25
GCDH-201ENST00000222214 IGHV7-4-1A0A0J9YVY3 117 aa13.47□□□□□ -0.25
GCDH-201ENST00000222214 FABP5P3A8MUU1 101 aa13.47□□□□□ -0.25
GCDH-201ENST00000222214 ELANEP08246 267 aa13.47□□□□□ -0.25
GCDH-201ENST00000222214 FOXE3Q13461 319 aa13.47□□□□□ -0.25
GCDH-201ENST00000222214 IQCJQ1A5X6 159 aa13.47□□□□□ -0.25
GCDH-201ENST00000222214 TMEM95Q3KNT9 176 aa13.47□□□□□ -0.25
GCDH-201ENST00000222214 C9orf47Q6ZRZ4 202 aa13.47□□□□□ -0.25
GCDH-201ENST00000222214 PSMG3-AS1Q96PY0 264 aa13.47□□□□□ -0.25
GCDH-201ENST00000222214 SSBP4Q9BWG4 385 aaPredicted RBP13.47□□□□□ -0.25
GCDH-201ENST00000222214 CELSR2Q9HCU4 2923 aa13.47□□□□□ -0.25
GCDH-201ENST00000222214 PRAC2D3DTV9 90 aa13.47□□□□□ -0.25
GCDH-201ENST00000222214 SMAD7O15105 426 aaKnown RBP13.47□□□□□ -0.25
GCDH-201ENST00000222214 SAMD13Q5VXD3 122 aa13.47□□□□□ -0.25
GCDH-201ENST00000222214 LENEPQ9Y5L5 61 aa13.47□□□□□ -0.25
GCDH-201ENST00000222214 HOXA3O43365 443 aaPredicted RBP13.46□□□□□ -0.25
GCDH-201ENST00000222214 ZNF138P52744 262 aa13.46□□□□□ -0.25
GCDH-201ENST00000222214 SIGLECL1Q8N7X8 197 aa13.46□□□□□ -0.25
GCDH-201ENST00000222214 POLQO75417 2590 aa13.46□□□□□ -0.26
GCDH-201ENST00000222214 F2Z2F3 143 aa13.45□□□□□ -0.26
GCDH-201ENST00000222214 PRB4P10163 310 aaPredicted RBP13.45□□□□□ -0.26
GCDH-201ENST00000222214 ERCC8Q13216 396 aa13.45□□□□□ -0.26
GCDH-201ENST00000222214 LCNL1Q6ZST4 164 aa13.45□□□□□ -0.26
GCDH-201ENST00000222214 ZNF702PQ9H963 129 aa13.45□□□□□ -0.26
GCDH-201ENST00000222214 NRN1Q9NPD7 142 aa13.45□□□□□ -0.26
GCDH-201ENST00000222214 UFC1Q9Y3C8 167 aa13.45□□□□□ -0.26
GCDH-201ENST00000222214 GPX1P07203 203 aa13.45□□□□□ -0.26
GCDH-201ENST00000222214 ARMS2P0C7Q2 107 aa13.45□□□□□ -0.26
GCDH-201ENST00000222214 DMRTA1Q5VZB9 504 aa13.45□□□□□ -0.26
GCDH-201ENST00000222214 RHPN1-AS1Q9BWJ2 59 aa13.45□□□□□ -0.26
GCDH-201ENST00000222214 AGPAT4-IT1Q9H0P7 198 aa13.45□□□□□ -0.26
GCDH-201ENST00000222214 OVOL1O14753 267 aa13.44□□□□□ -0.26
GCDH-201ENST00000222214 HIST1H1AQ02539 215 aaPredicted RBP13.44□□□□□ -0.26
GCDH-201ENST00000222214 IL17RELQ6ZVW7 336 aa13.44□□□□□ -0.26
GCDH-201ENST00000222214 TMEM86BQ8N661 226 aa13.44□□□□□ -0.26
GCDH-201ENST00000222214 SMPXQ9UHP9 88 aa13.44□□□□□ -0.26
GCDH-201ENST00000222214 LOC102724200A0A096LPH7 203 aaPredicted RBP13.43□□□□□ -0.26
GCDH-201ENST00000222214 SOCS3O14543 225 aa13.43□□□□□ -0.26
GCDH-201ENST00000222214 ZNF324O75467 553 aaPredicted RBP13.43□□□□□ -0.26
GCDH-201ENST00000222214 ZNF80P51504 273 aaPredicted RBP13.43□□□□□ -0.26
GCDH-201ENST00000222214 CDPF1Q6NVV7 123 aa13.43□□□□□ -0.26
GCDH-201ENST00000222214 MYOZ3Q8TDC0 251 aa13.43□□□□□ -0.26
GCDH-201ENST00000222214 RCHY1Q96PM5 261 aa13.43□□□□□ -0.26
GCDH-201ENST00000222214 CTRLP40313 264 aa13.43□□□□□ -0.26
GCDH-201ENST00000222214 LINC01559Q495D7 138 aa13.43□□□□□ -0.26
GCDH-201ENST00000222214 ZNF493Q6ZR52 646 aa13.43□□□□□ -0.26
GCDH-201ENST00000222214 Q8N2B8 174 aa13.43□□□□□ -0.26
GCDH-201ENST00000222214 RNF152Q8N8N0 203 aa13.43□□□□□ -0.26
GCDH-201ENST00000222214 ZNF738Q8NE65 137 aa13.43□□□□□ -0.26
GCDH-201ENST00000222214 LINC00477Q96M19 166 aa13.43□□□□□ -0.26
GCDH-201ENST00000222214 CELSR1Q9NYQ6 3014 aa13.43□□□□□ -0.26
GCDH-201ENST00000222214 CREBBPQ92793 2442 aa13.42□□□□□ -0.26
GCDH-201ENST00000222214 AMTP48728 403 aa13.42□□□□□ -0.26
GCDH-201ENST00000222214 TPPP3Q9BW30 176 aa13.42□□□□□ -0.26
GCDH-201ENST00000222214 LGALS1P09382 135 aaKnown RBP13.41□□□□□ -0.26
GCDH-201ENST00000222214 TM4SF20Q53R12 229 aa13.41□□□□□ -0.26
GCDH-201ENST00000222214 LYZL1Q6UWQ5 148 aa13.41□□□□□ -0.26
GCDH-201ENST00000222214 FER1L6-AS1Q8NA97 138 aa13.41□□□□□ -0.26
GCDH-201ENST00000222214 OR10J6PQ8NGY7 276 aa13.41□□□□□ -0.26
GCDH-201ENST00000222214 UBE2E2Q96LR5 201 aa13.41□□□□□ -0.26
GCDH-201ENST00000222214 CSMD2Q7Z408 3487 aa13.41□□□□□ -0.26
GCDH-201ENST00000222214 ORM1P02763 201 aa13.41□□□□□ -0.26
GCDH-201ENST00000222214 IGLC6P0CF74 106 aa13.41□□□□□ -0.26
GCDH-201ENST00000222214 ABCA12Q86UK0 2595 aa13.41□□□□□ -0.26
GCDH-201ENST00000222214 TMSB15BA0A087X1C1 80 aa13.4□□□□□ -0.26
GCDH-201ENST00000222214 SCGB1D1O95968 90 aa13.4□□□□□ -0.26
GCDH-201ENST00000222214 RPLP1P05386 114 aaKnown RBP13.4□□□□□ -0.26
GCDH-201ENST00000222214 PKIAP61925 76 aa13.4□□□□□ -0.26
GCDH-201ENST00000222214 RPL11P62913 178 aaKnown RBP13.4□□□□□ -0.26
GCDH-201ENST00000222214 Q6ZWC4 215 aa13.4□□□□□ -0.26
GCDH-201ENST00000222214 WFDC11Q8NEX6 87 aa13.4□□□□□ -0.26
GCDH-201ENST00000222214 CHD6Q8TD26 2715 aa13.4□□□□□ -0.26
GCDH-201ENST00000222214 TSTD3H0UI37 97 aa13.4□□□□□ -0.27
GCDH-201ENST00000222214 HSBP1O75506 76 aa13.4□□□□□ -0.27
GCDH-201ENST00000222214 REC114Q7Z4M0 266 aa13.4□□□□□ -0.27
GCDH-201ENST00000222214 NAGKQ9UJ70 344 aa13.4□□□□□ -0.27
GCDH-201ENST00000222214 ZFHX3Q15911 3703 aa13.4□□□□□ -0.27
GCDH-201ENST00000222214 TRBV7-9A0A0J9YWB2 115 aa13.39□□□□□ -0.27
GCDH-201ENST00000222214 LGALS9O00182 355 aa13.39□□□□□ -0.27
GCDH-201ENST00000222214 CHCHD1Q96BP2 118 aaKnown RBP13.39□□□□□ -0.27
GCDH-201ENST00000222214 C20orf173Q96LM9 149 aa13.39□□□□□ -0.27
GCDH-201ENST00000222214 CNFNQ9BYD5 112 aa13.39□□□□□ -0.27
GCDH-201ENST00000222214 CENPEQ02224 2701 aa13.39□□□□□ -0.27
GCDH-201ENST00000222214 MAP1AP78559 2803 aaPredicted RBP13.39□□□□□ -0.27
GCDH-201ENST00000222214 PMCHP20382 165 aa13.38□□□□□ -0.27
GCDH-201ENST00000222214 ID1P41134 155 aa13.38□□□□□ -0.27
GCDH-201ENST00000222214 C10orf99Q6UWK7 81 aa13.38□□□□□ -0.27
GCDH-201ENST00000222214 KMT2BQ9UMN6 2715 aaPredicted RBP13.38□□□□□ -0.27
GCDH-201ENST00000222214 FOXC2Q99958 501 aa13.38□□□□□ -0.27
GCDH-201ENST00000222214 DOPEY2Q9Y3R5 2298 aa13.38□□□□□ -0.27
GCDH-201ENST00000222214 RAB4AP20338 218 aa13.36□□□□□ -0.27
GCDH-201ENST00000222214 RNASEKQ6P5S7 137 aaKnown RBP13.36□□□□□ -0.27
GCDH-201ENST00000222214 NIT1Q86X76 327 aa13.36□□□□□ -0.27
GCDH-201ENST00000222214 TMEM213A2RRL7 107 aa13.36□□□□□ -0.27
GCDH-201ENST00000222214 APCP25054 2843 aa13.35□□□□□ -0.27
GCDH-201ENST00000222214 LINC00587B1AMM8 73 aa13.35□□□□□ -0.27
GCDH-201ENST00000222214 FAM104BQ5XKR9 115 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms