RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 H3BRN7 92 aa10.71□□□□□ -0.7
RAB3D-201ENST00000222120 LEPP41159 167 aa10.71□□□□□ -0.7
RAB3D-201ENST00000222120 PET117Q6UWS5 81 aa10.71□□□□□ -0.7
RAB3D-201ENST00000222120 C8orf31Q8N9H6 132 aa10.71□□□□□ -0.7
RAB3D-201ENST00000222120 TRAV41A0A0B4J266 112 aa10.7□□□□□ -0.7
RAB3D-201ENST00000222120 H3BVH4 76 aa10.7□□□□□ -0.7
RAB3D-201ENST00000222120 PAX8Q06710 450 aa10.7□□□□□ -0.7
RAB3D-201ENST00000222120 MAPK1IP1LQ8NDC0 245 aa10.7□□□□□ -0.7
RAB3D-201ENST00000222120 FOXC2Q99958 501 aa10.7□□□□□ -0.7
RAB3D-201ENST00000222120 MRPS16Q9Y3D3 137 aaKnown RBP10.7□□□□□ -0.7
RAB3D-201ENST00000222120 LTAP01374 205 aa10.7□□□□□ -0.7
RAB3D-201ENST00000222120 EBLN2Q6P2I7 272 aa10.7□□□□□ -0.7
RAB3D-201ENST00000222120 ST20Q9HBF5 79 aa10.7□□□□□ -0.7
RAB3D-201ENST00000222120 TP53TG3Q9ULZ0 132 aa10.7□□□□□ -0.7
RAB3D-201ENST00000222120 RNASE4P34096 147 aaKnown RBP10.7□□□□□ -0.7
RAB3D-201ENST00000222120 IGHV1-24A0A0C4DH33 117 aa10.69□□□□□ -0.7
RAB3D-201ENST00000222120 BCL6BQ8N143 479 aaPredicted RBP10.69□□□□□ -0.7
RAB3D-201ENST00000222120 ZNF492Q9P255 531 aa10.69□□□□□ -0.7
RAB3D-201ENST00000222120 NACAE9PAV3 2078 aa10.69□□□□□ -0.7
RAB3D-201ENST00000222120 TGFAP01135 160 aa10.69□□□□□ -0.7
RAB3D-201ENST00000222120 ZFP36P26651 326 aaKnown RBP10.69□□□□□ -0.7
RAB3D-201ENST00000222120 CDSNQ15517 529 aa10.69□□□□□ -0.7
RAB3D-201ENST00000222120 ZNF502Q8TBZ5 544 aa10.69□□□□□ -0.7
RAB3D-201ENST00000222120 TNRC18O15417 2968 aaPredicted RBP10.69□□□□□ -0.7
RAB3D-201ENST00000222120 SPRY2O43597 315 aa10.69□□□□□ -0.7
RAB3D-201ENST00000222120 SCGB1D4Q6XE38 83 aa10.69□□□□□ -0.7
RAB3D-201ENST00000222120 LYPD1Q8N2G4 141 aa10.69□□□□□ -0.7
RAB3D-201ENST00000222120 GAGE12BA1L429 117 aa10.68□□□□□ -0.7
RAB3D-201ENST00000222120 GDF5OSQ5U4N7 250 aa10.68□□□□□ -0.7
RAB3D-201ENST00000222120 IFI27L1Q96BM0 104 aa10.68□□□□□ -0.7
RAB3D-201ENST00000222120 HBDP02042 147 aa10.68□□□□□ -0.7
RAB3D-201ENST00000222120 DPF1Q92782 380 aa10.68□□□□□ -0.7
RAB3D-201ENST00000222120 DUX5Q96PT3 197 aa10.68□□□□□ -0.7
RAB3D-201ENST00000222120 CST9LQ9H4G1 147 aa10.68□□□□□ -0.7
RAB3D-201ENST00000222120 A0A1B0GW15 77 aa10.68□□□□□ -0.7
RAB3D-201ENST00000222120 PRR25Q96S07 402 aa10.68□□□□□ -0.7
RAB3D-201ENST00000222120 SPCS1Q9Y6A9 102 aa10.68□□□□□ -0.7
RAB3D-201ENST00000222120 ADGRG4Q8IZF6 3080 aa10.68□□□□□ -0.7
RAB3D-201ENST00000222120 AKAP13Q12802 2813 aa10.68□□□□□ -0.7
RAB3D-201ENST00000222120 FAM106AQ4KMX7 169 aa10.67□□□□□ -0.7
RAB3D-201ENST00000222120 SIGLEC15Q6ZMC9 328 aa10.67□□□□□ -0.7
RAB3D-201ENST00000222120 IL17RELQ6ZVW7 336 aa10.67□□□□□ -0.7
RAB3D-201ENST00000222120 SLC50A1Q9BRV3 221 aa10.67□□□□□ -0.7
RAB3D-201ENST00000222120 TMEM14CQ9P0S9 112 aa10.67□□□□□ -0.7
RAB3D-201ENST00000222120 OOSP1A8MZH6 123 aa10.67□□□□□ -0.7
RAB3D-201ENST00000222120 FCN3O75636 299 aa10.67□□□□□ -0.7
RAB3D-201ENST00000222120 CRYGCP07315 174 aa10.67□□□□□ -0.7
RAB3D-201ENST00000222120 UBE2E1P51965 193 aa10.67□□□□□ -0.7
RAB3D-201ENST00000222120 SRSF8Q9BRL6 282 aaKnown RBP10.67□□□□□ -0.7
RAB3D-201ENST00000222120 OCIAD2Q56VL3 154 aa10.66□□□□□ -0.7
RAB3D-201ENST00000222120 CT83Q5H943 113 aa10.66□□□□□ -0.7
RAB3D-201ENST00000222120 OR11H6Q8NGC7 330 aa10.66□□□□□ -0.7
RAB3D-201ENST00000222120 JKAMPQ9P055 326 aa10.66□□□□□ -0.7
RAB3D-201ENST00000222120 PRSS57Q6UWY2 283 aa10.66□□□□□ -0.7
RAB3D-201ENST00000222120 DYNAPQ8N1N2 210 aa10.66□□□□□ -0.7
RAB3D-201ENST00000222120 GFRA4Q9GZZ7 299 aa10.66□□□□□ -0.7
RAB3D-201ENST00000222120 MOB4Q9Y3A3 225 aa10.66□□□□□ -0.7
RAB3D-201ENST00000222120 CENPEQ02224 2701 aa10.66□□□□□ -0.7
RAB3D-201ENST00000222120 RNF114Q9Y508 228 aa10.66□□□□□ -0.7
RAB3D-201ENST00000222120 TNRC6BQ9UPQ9 1833 aaKnown RBP10.66□□□□□ -0.7
RAB3D-201ENST00000222120 IGHV7-81A0A0B4J1V7 117 aa10.65□□□□□ -0.7
RAB3D-201ENST00000222120 IGHV2-70DA0A0C4DH43 119 aa10.65□□□□□ -0.7
RAB3D-201ENST00000222120 PDE6HQ13956 83 aa10.65□□□□□ -0.7
RAB3D-201ENST00000222120 HOXB4P17483 251 aaPredicted RBP10.65□□□□□ -0.7
RAB3D-201ENST00000222120 ID1P41134 155 aa10.65□□□□□ -0.7
RAB3D-201ENST00000222120 FAM159AQ6UWV7 190 aa10.65□□□□□ -0.7
RAB3D-201ENST00000222120 OR2K2Q8NGT1 345 aa10.65□□□□□ -0.7
RAB3D-201ENST00000222120 INS-IGF2F8WCM5 200 aa10.65□□□□□ -0.7
RAB3D-201ENST00000222120 NDUFA3O95167 84 aa10.65□□□□□ -0.7
RAB3D-201ENST00000222120 MSRB1Q9NZV6 116 aa10.65□□□□□ -0.7
RAB3D-201ENST00000222120 EGR2P11161 476 aaPredicted RBP10.64□□□□□ -0.71
RAB3D-201ENST00000222120 SRSF9Q13242 221 aaKnown RBP eCLIP10.64□□□□□ -0.71
RAB3D-201ENST00000222120 CTSGP08311 255 aa10.64□□□□□ -0.71
RAB3D-201ENST00000222120 FANCD2OSQ96PS1 177 aa10.64□□□□□ -0.71
RAB3D-201ENST00000222120 MRPL51Q4U2R6 128 aaKnown RBP10.64□□□□□ -0.71
RAB3D-201ENST00000222120 FAM104BQ5XKR9 115 aa10.64□□□□□ -0.71
RAB3D-201ENST00000222120 NPFFR1Q9GZQ6 430 aa10.64□□□□□ -0.71
RAB3D-201ENST00000222120 TP73-AS1Q9UF72 201 aa10.64□□□□□ -0.71
RAB3D-201ENST00000222120 IGLV11-55A0A075B6I3 123 aa10.63□□□□□ -0.71
RAB3D-201ENST00000222120 HAX1O00165 279 aa10.63□□□□□ -0.71
RAB3D-201ENST00000222120 ASIPP42127 132 aa10.63□□□□□ -0.71
RAB3D-201ENST00000222120 Q5PR19 223 aa10.63□□□□□ -0.71
RAB3D-201ENST00000222120 PSMB11A5LHX3 300 aa10.63□□□□□ -0.71
RAB3D-201ENST00000222120 KLF12Q9Y4X4 402 aa10.63□□□□□ -0.71
RAB3D-201ENST00000222120 DSCAML1Q8TD84 2053 aa10.63□□□□□ -0.71
RAB3D-201ENST00000222120 TRAV26-2A0A0B4J265 109 aa10.63□□□□□ -0.71
RAB3D-201ENST00000222120 FAM231BA6NCW3 169 aa10.63□□□□□ -0.71
RAB3D-201ENST00000222120 FAM110DQ8TAY7 271 aaPredicted RBP10.63□□□□□ -0.71
RAB3D-201ENST00000222120 WIPF2Q8TF74 440 aaPredicted RBP10.63□□□□□ -0.71
RAB3D-201ENST00000222120 ABCA12Q86UK0 2595 aa10.62□□□□□ -0.71
RAB3D-201ENST00000222120 DMDP11532 3685 aa10.62□□□□□ -0.71
RAB3D-201ENST00000222120 LINC01548A6NM66 108 aa10.62□□□□□ -0.71
RAB3D-201ENST00000222120 OVOL3O00110 214 aa10.62□□□□□ -0.71
RAB3D-201ENST00000222120 SCGB1C2P0DMR2 95 aa10.62□□□□□ -0.71
RAB3D-201ENST00000222120 SIGLEC8Q9NYZ4 499 aa10.62□□□□□ -0.71
RAB3D-201ENST00000222120 NPYP01303 97 aa10.62□□□□□ -0.71
RAB3D-201ENST00000222120 SMIM13P0DJ93 91 aa10.62□□□□□ -0.71
RAB3D-201ENST00000222120 OR4X2Q8NGF9 303 aa10.62□□□□□ -0.71
RAB3D-201ENST00000222120 IGHV3OR16-12A0A075B7B8 117 aa10.62□□□□□ -0.71
RAB3D-201ENST00000222120 ZNF688P0C7X2 276 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms