RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 RBPMS2Q6ZRY4 209 aaKnown RBP14.13□□□□□ -0.15
CTSA-201ENST00000191018 C16orf92Q96LL3 132 aa14.13□□□□□ -0.15
CTSA-201ENST00000191018 ERCC8Q13216 396 aa14.12□□□□□ -0.15
CTSA-201ENST00000191018 PDZD11Q5EBL8 140 aa14.12□□□□□ -0.15
CTSA-201ENST00000191018 GDF5OSQ5U4N7 250 aa14.12□□□□□ -0.15
CTSA-201ENST00000191018 SH2D1AO60880 128 aa14.12□□□□□ -0.15
CTSA-201ENST00000191018 GZMBP10144 247 aa14.12□□□□□ -0.15
CTSA-201ENST00000191018 FAM162BQ5T6X4 162 aa14.12□□□□□ -0.15
CTSA-201ENST00000191018 NRN1Q9NPD7 142 aa14.12□□□□□ -0.15
CTSA-201ENST00000191018 UFC1Q9Y3C8 167 aa14.12□□□□□ -0.15
CTSA-201ENST00000191018 DNAJC9-AS1A6NH13 148 aa14.11□□□□□ -0.15
CTSA-201ENST00000191018 RAB4BP61018 213 aa14.11□□□□□ -0.15
CTSA-201ENST00000191018 C9orf47Q6ZRZ4 202 aa14.11□□□□□ -0.15
CTSA-201ENST00000191018 PGLYRP4Q96LB8 373 aa14.11□□□□□ -0.15
CTSA-201ENST00000191018 AGPAT4-IT1Q9H0P7 198 aa14.11□□□□□ -0.15
CTSA-201ENST00000191018 YAE1D1Q9NRH1 226 aa14.11□□□□□ -0.15
CTSA-201ENST00000191018 SMIM6P0DI80 62 aa14.1□□□□□ -0.15
CTSA-201ENST00000191018 EDN2P20800 178 aa14.1□□□□□ -0.15
CTSA-201ENST00000191018 ZNF80P51504 273 aaPredicted RBP14.1□□□□□ -0.15
CTSA-201ENST00000191018 C20orf173Q96LM9 149 aa14.1□□□□□ -0.15
CTSA-201ENST00000191018 HIST1H2BLQ99880 126 aa14.1□□□□□ -0.15
CTSA-201ENST00000191018 NDFIP1Q9BT67 221 aa14.1□□□□□ -0.15
CTSA-201ENST00000191018 PPP1R14DQ9NXH3 145 aa14.1□□□□□ -0.15
CTSA-201ENST00000191018 A8MWP6 167 aa14.1□□□□□ -0.15
CTSA-201ENST00000191018 S100A2P29034 98 aa14.1□□□□□ -0.15
CTSA-201ENST00000191018 REC114Q7Z4M0 266 aa14.1□□□□□ -0.15
CTSA-201ENST00000191018 KLHDC1Q8N7A1 406 aa14.1□□□□□ -0.15
CTSA-201ENST00000191018 C12orf57Q99622 126 aa14.1□□□□□ -0.15
CTSA-201ENST00000191018 TMEM213A2RRL7 107 aa14.09□□□□□ -0.15
CTSA-201ENST00000191018 GRIFINA4D1Z8 144 aa14.09□□□□□ -0.15
CTSA-201ENST00000191018 FAM181BA6NEQ2 426 aa14.09□□□□□ -0.15
CTSA-201ENST00000191018 CRISP2P16562 243 aa14.09□□□□□ -0.15
CTSA-201ENST00000191018 BMI1P35226 326 aa14.09□□□□□ -0.15
CTSA-201ENST00000191018 HBBP68871 147 aa14.09□□□□□ -0.15
CTSA-201ENST00000191018 SLAQ13239 276 aa14.09□□□□□ -0.15
CTSA-201ENST00000191018 ESM1Q9NQ30 184 aa14.09□□□□□ -0.15
CTSA-201ENST00000191018 TP53TG3Q9ULZ0 132 aa14.09□□□□□ -0.15
CTSA-201ENST00000191018 SONP18583 2426 aaKnown RBP14.08□□□□□ -0.16
CTSA-201ENST00000191018 IGHV4OR15-8A0A075B7B6 117 aa14.08□□□□□ -0.16
CTSA-201ENST00000191018 A0A087WW49 117 aa14.08□□□□□ -0.16
CTSA-201ENST00000191018 LGALS9O00182 355 aa14.08□□□□□ -0.16
CTSA-201ENST00000191018 APCSP02743 223 aa14.08□□□□□ -0.16
CTSA-201ENST00000191018 Q0VG73 95 aa14.08□□□□□ -0.16
CTSA-201ENST00000191018 Q6ZSV7 163 aa14.08□□□□□ -0.16
CTSA-201ENST00000191018 A0A1B0GUS0 222 aa14.08□□□□□ -0.16
CTSA-201ENST00000191018 FABP4P15090 132 aa14.08□□□□□ -0.16
CTSA-201ENST00000191018 CAMPP49913 170 aa14.08□□□□□ -0.16
CTSA-201ENST00000191018 ZNF138P52744 262 aa14.08□□□□□ -0.16
CTSA-201ENST00000191018 SRSF2Q01130 221 aaKnown RBP14.08□□□□□ -0.16
CTSA-201ENST00000191018 Q6AWC8 147 aa14.08□□□□□ -0.16
CTSA-201ENST00000191018 TMEM189A5PLL7 270 aa14.07□□□□□ -0.16
CTSA-201ENST00000191018 HAX1O00165 279 aa14.07□□□□□ -0.16
CTSA-201ENST00000191018 AMBPP02760 352 aa14.07□□□□□ -0.16
CTSA-201ENST00000191018 KIAA1644Q3SXP7 199 aa14.07□□□□□ -0.16
CTSA-201ENST00000191018 TMEM78Q5T7P6 136 aa14.07□□□□□ -0.16
CTSA-201ENST00000191018 TMEM256Q8N2U0 113 aa14.07□□□□□ -0.16
CTSA-201ENST00000191018 OR10D4PQ8NGN7 298 aa14.07□□□□□ -0.16
CTSA-201ENST00000191018 RPL11P62913 178 aaKnown RBP14.06□□□□□ -0.16
CTSA-201ENST00000191018 ZNF738Q8NE65 137 aa14.06□□□□□ -0.16
CTSA-201ENST00000191018 FABP5P3A8MUU1 101 aa14.06□□□□□ -0.16
CTSA-201ENST00000191018 LINC00310P59036 64 aa14.06□□□□□ -0.16
CTSA-201ENST00000191018 TCTEX1D4Q5JR98 221 aa14.06□□□□□ -0.16
CTSA-201ENST00000191018 ZNF575Q86XF7 245 aa14.06□□□□□ -0.16
CTSA-201ENST00000191018 OVOL1O14753 267 aa14.05□□□□□ -0.16
CTSA-201ENST00000191018 ESDP10768 282 aa14.05□□□□□ -0.16
CTSA-201ENST00000191018 HOXD3P31249 432 aaPredicted RBP14.05□□□□□ -0.16
CTSA-201ENST00000191018 OR10J3Q5JRS4 329 aa14.05□□□□□ -0.16
CTSA-201ENST00000191018 PACRGQ96M98 296 aaPredicted RBP14.05□□□□□ -0.16
CTSA-201ENST00000191018 SSBP4Q9BWG4 385 aaPredicted RBP14.05□□□□□ -0.16
CTSA-201ENST00000191018 TMEM160Q9NX00 188 aa14.05□□□□□ -0.16
CTSA-201ENST00000191018 LENEPQ9Y5L5 61 aa14.05□□□□□ -0.16
CTSA-201ENST00000191018 FASNP49327 2511 aaKnown RBP14.04□□□□□ -0.16
CTSA-201ENST00000191018 A0A1B0GUT8 65 aa14.04□□□□□ -0.16
CTSA-201ENST00000191018 NUPR1O60356 82 aa14.04□□□□□ -0.16
CTSA-201ENST00000191018 SRIP30626 198 aa14.04□□□□□ -0.16
CTSA-201ENST00000191018 SYNJ2BPP57105 145 aa14.04□□□□□ -0.16
CTSA-201ENST00000191018 DCANP1Q8TF63 244 aa14.04□□□□□ -0.16
CTSA-201ENST00000191018 ACANP16112 2415 aa14.04□□□□□ -0.16
CTSA-201ENST00000191018 ARMS2P0C7Q2 107 aa14.04□□□□□ -0.16
CTSA-201ENST00000191018 RPS20P60866 119 aaKnown RBP14.04□□□□□ -0.16
CTSA-201ENST00000191018 SAMD13Q5VXD3 122 aa14.04□□□□□ -0.16
CTSA-201ENST00000191018 GATD1Q8NB37 220 aa14.04□□□□□ -0.16
CTSA-201ENST00000191018 LINC00477Q96M19 166 aa14.04□□□□□ -0.16
CTSA-201ENST00000191018 ANK3Q12955 4377 aaKnown RBP14.03□□□□□ -0.16
CTSA-201ENST00000191018 IGKV3-7A0A075B6H7 116 aa14.03□□□□□ -0.16
CTSA-201ENST00000191018 F2Z2F3 143 aa14.03□□□□□ -0.16
CTSA-201ENST00000191018 KLF5Q13887 457 aaPredicted RBP14.03□□□□□ -0.16
CTSA-201ENST00000191018 PYY3Q5JQD4 70 aa14.03□□□□□ -0.16
CTSA-201ENST00000191018 C18orf65Q6ZTR6 163 aa14.03□□□□□ -0.16
CTSA-201ENST00000191018 A0A1B0GW15 77 aa14.02□□□□□ -0.16
CTSA-201ENST00000191018 ZNF705DP0CH99 300 aaPredicted RBP14.02□□□□□ -0.16
CTSA-201ENST00000191018 ZNF705BP0CI00 300 aaPredicted RBP14.02□□□□□ -0.16
CTSA-201ENST00000191018 RIGQ13278 110 aa14.02□□□□□ -0.16
CTSA-201ENST00000191018 LINC01559Q495D7 138 aa14.02□□□□□ -0.16
CTSA-201ENST00000191018 C4orf3Q8WVX3 66 aa14.02□□□□□ -0.16
CTSA-201ENST00000191018 TMEM18Q96B42 140 aa14.02□□□□□ -0.16
CTSA-201ENST00000191018 TMSB15BA0A087X1C1 80 aa14.01□□□□□ -0.17
CTSA-201ENST00000191018 HIST1H1AQ02539 215 aaPredicted RBP14.01□□□□□ -0.17
CTSA-201ENST00000191018 SCGB2A2Q13296 93 aa14.01□□□□□ -0.17
CTSA-201ENST00000191018 SELENOKQ9Y6D0 94 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms